XLOC_009860 (gene) - C. hemisphaerica

Overview
NameXLOC_009860
Unique NameXLOC_009860
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000271:365369..372093-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009860 ID=XLOC_009860|Name=XLOC_009860|organism=Clytia hemisphaerica|type=gene|length=6725bp|location=Sequence derived from alignment at sc0000271:365369..372093- (Clytia hemisphaerica)
CTTTAGGTATCAAAGAATCAGACACTGGCCTTGCACCACCTGCAATGTGG GATTTGGCGGCTGATAAACAAACACTTCATTCAGAGCAACCACTACAAGT AATTTTTCATTCTTTCATTTAATGTGTCTGTACAATAGGTTGTTTACAGA ATTTGATACTCAGATGATAGCTTTGTTGTGTTATCTTTTTGAATATAATG GAATATATGTAAAAAACTTTCATATAATTAAGAATTTTAAAGCGTATATA TCCTGCGACAAGAAAATAACAAAACGCCTTTACTCAGCTTTACTTTTAGT TAGTTCATGATCTAGCTTGTATTTTTCTATGATGTTATAGGTTGCTCGTT GTACAAAAATTATAAATGCTGACTCGGACGATCCAAAATACATCATCAAT GTCAAACAGTTTGCCAAATTTGTGGTGGACCTTNTGTATTTTTCTATGCT GTTATAGGTTGCTCGTTGTACAAAAATTATAAATGCTGACTCGGACGATC CAAAATACATCATCAATGTCAAACAGTTTGCCAAATTTGTGGTGGACCTT GGTGATCAAGTGGCACCAACAGATATAGAGGAAGGAATGAGGGTCGGGGT GGACCGTAATAAATATCAAATTCATATTCCATTACCACCTAAAATTGACC CTACAGTTACTATGATGCAGGTACAGAGAGAGTCGATTAGTATAATATCT TTTATCCTCCCTGCAAGTATTTATATCAAAGATAAGTGCAAAGACTCGCC GAATGTTCTTGTCCTGGTCTAATTAGTTGTTCAACATGTCATCATCTAGA GGAAAATTTCTATTCTCATGTGGTTTAAAAGTAATGGAATTAGCTCATGC AATTTGATACAACTGCAATGAAAATATTTGAAAATGAAAATGGAATAAGG CAGACTCCCTGTAAATAGTTTTATCGGCGATCCAAAAAATATCTGCAATC TGATTGGTTAAAAAGAGTACAAATATATCTTGTATTTTACATGTAAAAAT ATAAATTGACGAAAAGATGTTGTTGCATTGTAGCGGTAGAAGCAATCTAA CGTCACTTTGCTAAAAAAGTGTCCTCCAACACAAAAAGTGCATTTTTGGG TCACCGATAAACCAGTTATCAGATAACTATTACATATCAAAAATAAGTCC AAGGACTCGCTGAATGTTTTTCACTTAATGATACTGACCTTCATGGTTTA ATAAAGTTAGTGACTTGGTTACAGTAAACATATTCACTATTAAGGTCGAA GAAAAACCAGATGTGACGTACGCTGACGTTGGTGGATGTAAAGAACAAAT CGATAAATTACGTGAAGTCGTTGAAACACCATTATTGCATGTAAGTGTCT CTCTGTCATGAACCTGTGAAAATGAATTTATCGATTAAATGTACTGAAAA AAAGTCCATCGTTGTAGTCTTCTTGATTCAGAATAATGGAGATAATTAGA GTCTATAGAAATAGCTCAATATCCTCTAAAATTTGGTTTTATTTCTTTAC TTTATACTCTTTCCTTTCAGCCTGAACGTTTTGTGAACCTGGGTATCGAT CCCCCTAAAGGTGTTCTGTGTTACGGCCCTCCCGGTACCGGTAAAACGTT ATGTGCAAGAGCTGTTGCCAACAGGACAGATGCTTGCTTTATCAGAGTTA TTGGTTCAGAATTGGTTCAAAAATATGTCGGAGAGGTATAGAATACACAA TATTCATTAATCTGCTTGCTTCAGTTTATTATGCAGTGCTTTTAGCAGTA TGAAATGCTGGTCTGCCACAACACCTTCCCATTTAAAACGGACACTTTTG AATTTTGTTATGCAAAAGATGTTTTTCTTCTTTTTTTGATGGGAGAAATT CATAGTGGGCGTTGAAAGTTTATGGGAATTACTAATGTAAATTACCATCC ATTTTTTGCCTATTTTTATGTGGAAGATTTATCTTGTGTACTTAAACGAT CATTAATAAAGTCATAATAACTTGAATTGACTCCTGCTTCTTTACAGGGT GCTCGAATGGTGCGTGAATTGTTCGAGATGGCACGAAGTAAAAAAGCTTG CATTATATTCTTTGATGAAATCGATGCTGTGGGAGGTAAGATTCTACAAT GAAAAATAGTACTAATTCACACATATTTCCTAATTAGTTATACATTCAAT GGTCATTATGCATGCGTTAGCATGTTTAGCAAACTTAGGTAAAACTGTCA ACAGTTTTAGCTATTTTGGTACGAAATCAGTATTTGCTTGTAGCAGTTGA CAGTTTTAGTTATTTTGAAACGAATTCAGGTTTGTAGGCTTATATACAAA ACATTTAGTTTAGCTTGACGTTTCTTTTTTCTCTGTACTAGGTGCTCGTT TTGACGATGGTGCTGGAGGAGACAATGAAGTGCAGAGAACTATGTTAGAA TTGATCAATCAATTGGATGGTTTTGATCCAAGAGGAAACATCAAAGTGCT CATGGCCACAAACAGGTAAAACAATATGTAATAGTTATCGGACAGTTGCG AGTACAATATGAAAAATATTTTACGAGTTCCGAGATTTTTCCGTACAATA TTTTCCGAGCCTTTAGGCGAGGAAAATATACGGAAAATACGGAACGAGTA AAATATTTCCATATTGTACGAGCTAATGTCTGATAACTGGTTTATCGGTG ACCCAAAAAATGCACTTTTTGTGTTGGAATAAAGCGCAGGGCACTTTTGT AGCAAAGTGACGTTAGATTGCTGCTACCACTACAATGCAACAACATCTTT TCGTCAATTTATATTTTTACATGTAAAATACAAGATATATTGTACTCTTT TTAACCAATCAGATTGCAGATATTTTTTGGATCGCCGATAACCACTATTA ATGTATCCAAGCCCAGTCATCCTCTAGACATTGTTATATTGCTGTACCGG AGACATTGTCGTTTACATGATTGCTCTTGCAAGTTACTAGGCTGTCAGCA TTTTCGGATTAGTTTTGTTTGTAAAGGGCTGCGAATCAACCTCAAAAGTC TTGTCCGCTTAGTAATTTTTTCTTAAATAAGTTTTTTGAGCTGGGAATCG TTACTTACTTAGCAAGCGGGAGCGTTTTTTGGAGTTGGATTCGCATCCTT TGTAACAAAACAAATTAAAGAGATGCTCTAAACCCAGCATGTTACCTGTT GAGTCGTTTTCAGAAACATTTGTTTTCAATATATCTATTCTTGTGTTTTA AAGAGTAAAAGAAATTAGTGAAAAAAGCATGTCCCTACCTGGAACATAGA CTCGACACAAATTTCCCGACAATTGTTGTTGCCCTTAGTAACGATATCAA CTACAAAAAGTGCTGATCTAAGCATTTTACTCAAATACACGGGCCGTCTT AAAAGAGAAAATACTAAAATTTCAATATTGGCTGTCATTGTATAATACAG AATGCTTTGACCGCCATTTATGAGCTTTTTGTTCTGTCATGAATTTTATA TAAAGTACTTTATTCATGATTATACAATGATTATGAAACACGTTGAATAG ACTTGGATATAATTTTTATAAATTTTAAAAGCTACTTTAAGAATTCCATA AAGAAATGCTATGGTATAATGATTGTTCCCCATAAAATGAGCTATTGTTT AAAAAAAAATTTCCACTTTTTAATACAGACATATTATCAGATTTATCTTT TTTCTTTTCTTTTGGAAAAAAATACCTTCTGATCTTAATCTCACGCGCCC TTAATGTACTTTATGCACGTGACCATTGAAACACCATCAGAAGAAGTGCA TTCCACTTCCAAATAAGGAAATACCAGTGAAATGCATACTCCATCGGTGA TGTTCAAATGACTTTTTATCTGACCTGACGATCTAAAGATCCAATAAAGA TACAATCTTTTTGCAACCCCACTAATAGCTTAATAGCCTCTTTCTCACCC AATATTAGGTTTGATAAATTTAGAAACCTTTCTCCCATAAGCTGTTTATA CGTGTTTTAACCCATTGTTCAACTATTGTTTTTTGTTATTTCAGACCAGA CACATTGGATCCCGCTTTAACGCGTCCTGGACGTCTAGATAGAAAAGTCG AATTCTCTCTACCCGACTTAGAGGTCAGCAAAAGTAATTTATTCTCCGTC CACGCACACACGTTTTCCAACATTTTCTGAAATTAACTTTTTTATTCGTT TGAGGATTACGTTTGATCAAATGAACCAATTTTGATAAATGACGCATCAA AATTTTAGTTTATCTTTTTCTTTTGCAATGGACCTCTTCCACTTTACTCG AGTCCCTCTAGAGTCGTCTCCTTTGAGTCTTGCCTATCAATTTACGGAGG GGTAAAATAATTCGTTATCATATAATTCGAACAAAGTGTTTCGTCTCCTT CGAACCCCCTTTGATTCAAAGTATCATGTAATTCAAAGAGACTTACTCGT CCTCTGGACAGTCGAACGAAATGAGTTTTAAAACACTATCACTACGGAAG CATTTCGAGTCCGAGGTGTTGCGAGCTAGTCGTGGCATGACTTTAAGCTC ATTTTCGAGGATTTTTGGACTATTGAAACTAAGGCTGCTGGACCTACATA TCCATTATCTCATGCCAAACTGAAGAGTTATCATCCTATGTTATTCTGTT TTTAGGGTCGTGCACACATTTTCAAAATCCACGCACGTTCGATGAGTGTT GACCGTGATATTCGATACGAATTATTGGCTCGTCTATGTCCTAACAGTAC AGGTAAAAACTCTTAACCATTATTAGTTTCGACCCCAGGTCCCGTCAAAT TCATATATCTCTCTGAAGATTTTTCCTCTTAATTGTCCAAAAACTACCAA CCTTGGCAGAGTGGAGATTATTGTAAATTGATTGTTTTTAATTAAAGCTG AGATTGCAATTGACCTAAGTCACTGTTTTGTTTATTAACGAAAAATTAGC AAATGTAAACTCGGACCTAGCCCTTNGTCACTGTTTTGTTTATTAGCGAA AAATTAGCAAATGTAAACTCGGACCTAGCCCTTTTTGTCGTACAGGTTGG ATTTTATCGCTGTATAACAGCTCTTTCACGAACCCTTGGTTTCTAAGCCT CATTTTTAAAAGACCTCTTTTCGTAAGCTGGCATTCACCATTTTACTAAA CAACTTCTAAATGATTCTTCTTTGTGCTGACAGGTGCTGAGATTCGAAGT GTTTGTACAGAGGCTGGTATGTTCGCTATCCGTGAACGAAGGAAGGTATG TGAAGTTTATATCTCGCCAGTTTCATCTATATTATGCACAAGAATGTTTC CTACATGTCTCTCTTATGTTAGTCATAAGAACTGTGTTGTTAGAGTTTTA AATACCAGCTATACCTAACCAAGATGTTTAGTATTAAGATTTTAAAGAAC GGCATGTGTGTTTCTAAGGCAGGAAACAAGGTATTAGTGATTTTCAAAAG TTTGGCAAAGTAGCAAATAAGGTCAGTAAGACAGAATGCTGGTTTTCAAT TCCTAAATGATGAGGCATATGTATTATTAAAAGTTATTATGTCTTGCTGA GCTTTAATGCTTAAAATTCTTAACATTTTATTTGAACTTTTAATCTCTGC ATTTTATTTTATTCAAACTAAAATGGTATCTTCACGTTGTTCTATAGAGA TTATCGTTTAATACCTTTTTATACTGTCAGAAAGAAAAAGCATGAACCCT TTTGCTGTTAGAAAACTCGCAGTATTAAAAACAGCTATCAGCTTTTCTAA ATACATGCATCACTTTGTTAGAAAAAATTTGATTATATAACGACATTTTC CTGTGACATCAATCCATAGATATTTGACTACCTTTCGCATACCCTGTCAG TATAATACTAAGGATTGGATGAACGAAAGAAATACCCTGTTAAATTACCA AAAGCCTCTCCCTCGGCAATTTTACAACTCATACCTAGTTTTGCTTATTT GTACCATCTATCTTAACGCCATGTATGCCGGTATTTCGACCTGAGGACTG TAACCCGTTAATAACGAACCTAGTCTATAACCCATGAAATAATCTGCGAA GATTGTAGGCGCAAAAGTCACTAAGCACTAATATAGACCCGAAGCAATGC AGTTAGACGAAAAAGGGTGGATAAGCAAGTATATAAGCTTAACAGATAAT CACCACACGAGTTTTACTTGAGTGTGCACTTTCAATAGAAGAGGGATTAA TTTTCATGGCAGTTAGATAGGTATGTATGAAAGACATTTATCAGTAAGAG CCAGTCTCTTCCCATTATTGAAAACGTGTTCCGTTTGTGATTATTATATT GAAAATACGACTTCATCAAAATTGTGAAATGATAGACGTACATACTAGTA GTGGTGCAATTCTTTTTAATAAATTTTCATGTCTAGCTGTTCTGCTTTAA TTTGCTGCATAAGCAATTTCTGTGTTAGCCAATGAGCATGAAGTTGGATT TTAGCTGACCTTGCATTTTCTTTCCTTTTCATTTCTTTTTAGGTTGCAAC GGAGAAGGATTTCTTAAGCGCTATCCAAAAGGTCATCAAGGCGTACGCTA AGTTCAGTGCCACACCCAAATACATGACGTATAATTAGATAGTGTTTAAA TTGAAACAAGTATTTGCTTATACTTTATAAAAGGTAGTGTTTTTATTTCT ATTTTTAACCATTGTCTTTTATTTATTGTAAAATTTTTTAGTTCAATCTA CTCATTAACCTTTGTTAAAAATAGAAATATACGATGCAATTTTTCAATAA ATTACTATTTATATTCTTCTCTTAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017643TCONS_00017643Clytia hemisphaericatranscript
TCONS_00017642TCONS_00017642Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017643-proteinTCONS_00017643-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000271supercontigsc0000271:365369..372093 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PSMC226S protease regulatory subunit 7 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
250.22 245.65 216.35 230.03 192.9 150.19 220.15 245.88 181.64 213.88 219.07 146.06 143.08 152.21 165.89 186.13 193.19 182.32 111.49 105.65 155.39 148.52 147.46 138.99 232.44 221.56 140.04 147.75 107.43 101.58