XLOC_009932 (gene) - C. hemisphaerica

Overview
NameXLOC_009932
Unique NameXLOC_009932
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000274:130686..134436+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009932 ID=XLOC_009932|Name=XLOC_009932|organism=Clytia hemisphaerica|type=gene|length=3751bp|location=Sequence derived from alignment at sc0000274:130686..134436+ (Clytia hemisphaerica)
AAAAGACTCTGTTCAAAAAGCAATGCTATAAAGGTTTCAAACTAATGGGT
TCAAAGTTGACACGAAGTCGAAGTATGTTATCTTCATAATTCTTTTAATC
GATAGtttatttaatttaaatcaaattgataattgagaaaatggaaaaaa
gtaCATCTGTGTGTCGTGACATTCTTGAGCTGTTCAAGAAAAGTGGAtga
tcccaccaacctgaaacgctttctcgtgtacccaccttatttttctttta
ataacatttgtgctttactcacttttgtccctgggacaatggagcaaaat
tgattagAATTGATTTTGCCAATTGTCCCAGAGACAatatcagcgtgtct
tttgggtatttccctcactttttaacaaaaaaagaaaccatgagacgcgc
actttttttcttgtgttggtgggatggagcatgttgcattgcacaaaCGC
AAAAAAAACTTATCGTCTCCCCAAGCCTTACAAAACTGTAGATNGCATTG
CACaaacgcaaaaaaaacttctcgtgtccccaagccttaaaaaCCTGTAG
ATTTTTACGTTTGGCGTAAAAACATGAtttgaaaaaccaacttttaattt
tcaataagtcGCAGTTCAGTTCAAAAGATTGGAACTTTAATAACACAGAG
GTCAGTATTATTTCTCTTACCATAATCACCTTATCACATTTGAACATCCA
ACTTGACATATTTCCTGCTATCGTtcacaatcaaaacaaacagcatgata
aaaaatgataaatagcACATTCATACTATTCATTcagttttctaaaaaat
gatcaGTAATTATCTAGTTTTTGCGTTGtgtttttgtcaaagttttatTC
ACTGAAATACTTTCTCTGCTGTCGAAATTTGTTGATTTGAATTCTGATTG
GTAACTGCTCCAAAATGGCGCAAGTAGAAGACCAGGTAAGATTGTAGGAT
gcaattgttttatttttacgtaGAGTTGACAAAGTGCGCATGCGTCGTAT
CCGGAATTACGGATTATAAAGGGCTAGGTAGACTAgacttccagaaaaaa
aaacgtatTCATAATCTAGATCTCCGCCAGAGTTCCTGAAAACATATATA
TCAGAATATTTTTCGATTAAAAAGTAACATCAAACTTTCTTGGTGGTCCA
AAAACTTGCACTTTTTGAAGGAAATTTATTTCCTAGTCGAAATTTTTTAA
GCTAAATACTTTTTGGACTACATTCTATTTAcgaaataccttatcggggg
aaaaaatgtcggagttttatttagtcggggtttttttcgttggggaaaaa
tttcgtcacctagaggcattttcgtcactttcccccgacatttttttccc
cgataaggtacttgACAGTAAAGGTACTATCTTTTACGCAGattctaaga
aaaaaataaaacgttAATTTTGCATACTGACAGTTTCATGCCGTCTTAAG
CAACTCATCTTCAGTTTTTCTAGAAAATTCCACAGTGCAATGTCTTAAAA
GTTTATGAACGTCCAGAGTTATTCGAATGCTATTAAGATAATTTTTCGCC
TATATGGTGGAATTTGGTGATTATGTAAGTACTatcttttatttgaattt
taagGCTCAATTTACGGATGTACAAATTGCAGAATTCAAAGAAGCGTTCG
GTCTCTTTGATAAGAATCATGATGGTTCAATTTCTGTACAAGAACTAGGT
GAAGTAATGTCACGAATGGGTTTCGATCCTACCGAAGGCGAACTTGAGGA
TATGCTGCATGACATTAGTGGGAGTGGTGACATTGATTTCGAAAAATTCG
TCAATATGATGGCCAAAATCAAAAAcgttgatgaagaagaagaaactaAA
CTCGTTaatatactttctttttttatgacacCATTTCATATTTCGTGTCC
GGCAAAtgattttcatctttattttttgagcTCTAGTTTAAGCTGTGAGC
AAATAAAACGTACCACAATAAGCTCTAAACACGTGATCTTTAAAAGGTAA
ATAGCCCTAAAAAAAGTTTctgtgaagtttttttgaacttttgaactaCA
CAAAACAATATTCGAAATTTTGGTACTCCGTACGGGTAAGAGTAAATCTT
GTATTTTTCTATCTTTGATCTGGAGTTTTCTTGCGCTTCTGACTCTTTAG
GATGTTTCGAAGTTGGACTTAGTCAGTTTTAGAGTTCaactttgatattt
tgaaatttgtcaAAGTTGAGTTTTGAGTGGTGGTATTCGAACCTACACAT
GAAAAGTACCTTTGGCTCAGAAGCTCCGTACTCTACCACTAGACCACAGA
ATTTACGGCCTAAATCTGAATGCACAATCTACTTATAGCGTGTAGTTTAC
AGACCTATTTGTATTGACATACCAAGGTTAGCCTCAACCCTAGGGCCTAG
AGCTCTATATTTACCTACCAATACTACTCCCAACTCTATTTTGACTCTCG
aactccaaccctgaccctaactgatccTGACCCTAACCGATATAAACGAT
TTTCACCCGTACGCATTCAATAACAAAAAATCTACTTTCGCCCGATTtcc
agccaaatttttcctgcactgtaagggtccgattttagagacctgatttt
tggccgaacgtacggtcgttttcaaaatcgagtgcccccccccaggcttt
ctgcctactctaacaattagaattgGTAAAACAGAGAGTCGGCCGTCTGA
ACTAGAACTAactaatgaatgaatgaatgaataccattttgttttcaaaa
ggCGTTCAAGATGTTTGATAAAGATCAGAATGGTTTCATCGacaaagaag
aattgaagctagTGATGGCAAGCCTTGGTGAGCAATTgactgatgatgaa
atacaagAAATGATGGCTGAAGCTGATCTTGATGGTGATGGCACAATAGA
TTACAACGGTATGTACTAGAAAAATTTGAGTGAGGCGAATTCACGATAAA
AAAGTGTAGCTGTAAAGTTTAGCTTTCCATCGTACTCAATACAAGATATA
CGTCCCTCACATTGAGTTTAACTTCAaagtaattttaaaagtttctgtat
caaaatgtcaattttaccCAATAACTGACCCTTACAATGCATTAGTCGCA
ctttagtttttcaaaagatttttacatttagattttaataaatCTTTCAG
TTAAAGCCTGGAGGTTTTAGAATCATGTACGTACTTTGATTGAGTGTCTT
TCCCGATCTTTTGCTTCTAAACCAATCATAAACGTTCTCCTCTTTATTTT
TTGCTTCTAAACCAATCATAAACGTtctcctttttattttttgcttctAA
ACCAATCATAAACGTTCTCCTCTTTATTTTTTGCTTCTAAACCAATCATA
AACGTtctcctttttattttttgcttctAAACCAATCATAAACGTtctcc
tttttattttttgcttctAAACCAATCATAAACGTTCTCCTCTTTATTTT
TTGCTTCTAAACCAATCATAAACGTTCTCCTCTTTATTTTTTGCCTCTAA
ACCAATCATAAACGTTCTCCTTTTtatttttgcagaattttgtcaaatga
tgaacTCGAAATGATAAAGAAATGTTTGGTTCATATTTGATCATCGAAGT
GATCTTGGATGCAAACCAATGTAAATCAACACTGATTGTCGAGTTTTGTa
cacacacccctgtctcacaaacCTAGGAGCAATCCTGTCAACTCTAAAGG
TTTAGATATAATAGACACCGATAGTAAAAAGAAGGAATAATTTCATGCGC
C
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017732TCONS_00017732Clytia hemisphaericatranscript
TCONS_00017733TCONS_00017733Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017733-proteinTCONS_00017733-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000274supercontigsc0000274:130686..134436 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.13	0.18	0.08	0.16	0.1	0.31	0	0.18	0.18	0	0.32	0.24	9.11	7.72	0.04	0.04	20.71	23.51	8.05	5.34	49.68	43.94	2.82	3.55	7.62	7.92	0	0	0	0