XLOC_010338 (gene) - C. hemisphaerica

Overview
NameXLOC_010338
Unique NameXLOC_010338
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000300:274581..285469+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010338 ID=XLOC_010338|Name=XLOC_010338|organism=Clytia hemisphaerica|type=gene|length=10889bp|location=Sequence derived from alignment at sc0000300:274581..285469+ (Clytia hemisphaerica)
GGGGGACACAAAATGTTAAAGTCTAATTTCAATCGATAACTCATTATACA ATATCCAAACATACAGTTCCATAAAGCATAAATTCAATAAAGTTCAACAC GTCGAGAAGACGGGAGCGCACGATCAACTCTGCCTGGCCGGTGCCATTTC CGAACGAACTCTTTACTCCTCCTGGTACCTGGATCTCTTCTCTCATGTTG ATACTCCCCGACGGGAGGACTTGCCTCGCCCGAGGCTAAAAGCTAAGTGT CTTTTCTcctaataaaatttctatctaaCGTACTCAAGGTGAGCTTCCAT TCAATGGTTACCATAACTACTAACATGAATAGTAAAATTGCGGAACTATG TCCTCATGACAGtatgttcaattttttatttcaggagCAATTTTGCACGT TTTTTGGATCAATCCGAGAAAGATAAAACATTAACACCAAGTCGTATCCC AAAACCTGGTCAGAATTTTGAATTCTTTACCTGTTTTTTATTGAATCtta taataatttttattcaaataatTGTATGGGGTTTGTTacaaaaagtttta tattttgTCTTACgtggcatcaaaataaaaaagctttaactgtcgttttt ttgggaaattgaGTTATGCCCATACTGATGCTTTATCGATAtttattttt tggcttaaatccatcaaaaaccaaCCTAAAATGATctaattttaagcttt tagaaaaataagaattttactttctacttttttttcagGGTAGAAAAGCC ACAAGTCCAGCGTGGAAACAATTTTGGACTTTAGgtttttttaacacaaa aatatttcaaatgttaatagtttttcaggatttaaggaaaaataatttaa agaacattttctcaaaacaacaaaaatggacttaaagcttttttattatG ATGCAACAATTAGCAATCAGATTgataattttgtttgttttacatAAAGA TTCCCATTCAATGGAAGCTAAATTAGCAAAGGATAGTTGCATACAAAAAT TACATGCTTTACTTCACAATTCATGATTTTTTATCTGTATTTTTATTCTT GACCTTAGAACTCTCACCCAAAGGTAAAAGCAGAGCAAAACAGAGAAGTC AATCAGCAAATGATCAACCTGAAGAACGACCATTGAGTCGAGGTGGCACT CTAAGAGAACAAGAAAATGTAAGTTATCTCATTGATATTGATTTAAGTCA TtctattaattatttttgaatgtgccaagaaaaaaatgtaaagtcTATTC CAAAAACTTTGTAGTCCACACGTTTTGATACATTCCTCTTGATAATTAAT TCGTTTCATTGCGGATGATCTTGATGAAATATACCTTAGGATTTCTTTGT TTGTGATATTAAAAGTGAAACATTTACCAACTCGAAGGCCTGTTGAAATT TCTTCTAATGGGCAATAAAGTTTGACCGTATGCAGTCCACAAAAATGATT TGGGTTATTCATTACTGACTTGGGTATCTTTGTAATTTCCATAATTTCGT TATTAAAGTGATAATATAATAATTATATTGTTTTATATCTTTTCTCCTTC AAGAGCAATGTATCAATGTAGAAATGTGGACTGCCAATTTATTTGGAATA GACTTTAGAATGATGATAAAGTAAACAGAAAGTCTTGTGAAAGTAATGTC TACACATTCAGTATCTTATGATATAATCATTATCCCCAACCAATAAAAAG GATTTACTTATTTTTGGAACAATCTGTGTGTGGGTTCTTAGTGTCCTACT CCTAGCGGTAAAGTATGtcatgtttgtttttctttcagaatATTCTGTCT CTCTTTGTGCACATGATGtagttattttcaatttcttttgcatTTCAGAT AATAAGTGACTTAAAGAAAGAATGTTTTGGATTAAAAATGCGAATTTACT ACATGGAAGAGCAGTTGCACGATGCTTTCGCTGGTGACACAGAAGGAACA ATCAAACAGGTTCGATCTCCCACTTTTGTTCACTATACACACTACACAGG TTTATAGTTGTGTTATCAATTTGAATACTATTTCATTCGGCTGGGTGGAT CTTGGTGGTGTGAATGAACTATGCTTCATTCTTTGTAGTTGCCCTTCCTg ataacatttttcaaaagcaACTCAGTAAGTATTTTCAATGATCGTTATGA TGTTTAGCCTaccttttgtattttctagAATATAGAATTGAAGGTGACAA TTGAAGAAATCAGGACTGATTTGAAAGAGAAAAGTAACCTTCTGACACAA GCATCGTAAGTCAGCTTAAAATCTTTTACGAGCGTAACCTTAGCCCAACC TGTTGATTTGCTGCTAGGctttaaaacatgaaaaattgggttctttttta ataaaagacTCAAAATGTAGATATATATAAGCTTTGAGTAATTTTGGGTA TCTGATAAGTAgaacaaatttttaaataaattccTATTGCAACCTCTATC TTACTAGATACTAAAGAGTATGTTCATtgcatcaaaacaaaacttctaaC ACTATATTTCATTATTGTATTTTAGGCAAGCGTTAGGGCAGCTGTCAGTT GAGAAAGAACAAGATATCAAAGAGGTAAATGGAATGATATAAATAGCTTG CCACATCTGACACCTTTCCCCCATTGCTCATCTTCTATAAGAAAGAAATC TCTATTTTTGACGCTTGTGACACTGAATGATGTATTCTTTAAGCTTGTAT TGTAACAGTTTCGTCAGTTTTAAGCATTTTGGTCTTGCTGAAAACTtgat ttcatgtttttattctttttagtCGAATGAGAAACATGATTTGGAGAAAA AACAGACCTTGGATGAATGCAATTTGAAACTGAACACTAAAGATAAAGTA ACATAtgataattctttgtttgtTATTTTAACTATTTTTATTTCTTGATT GTTAACAGCCTGTTGTATAACAACTTCGATGTTATTCAGATTCAAGTAAA GATATGTTAATTAAGTGTTCACATGTCTGGTGTTTAAAAAGACCCTATTC ACCATAGTAACATGAAAAGACTTATTTTCTTGAGgtcttttttgaaattg tcaCCATTTTAATCGAGATGTTTTAATATGGCAAATAAAACTTCAACTTC AAGTTGTTCTTCTGTATCATTCATTGTAAAAGCATTTGTTTTAGTCTCAA AGGTAGTAAATATAGGGGTAGTTATTATCTTTTTGTCTAATTTAATTAAA TATTAGGTATATtatatactcttaggttccaaataaacgggggggtcgaa taaacggggggggggcctaataagggccggggggttggaaaattttctac attttaataaacgggggggacctaattgccgggggggtttggaaattgta cttttgaaacccaaaaataaggtaaaaataggctataatcaggctattta gagcaaaataaggggccttcactttgacagctgaaaatattcttagatat taataaacgggggggacctaattgccgggggggtttggaaattgtacttt tgaaacccaaaaataaggtaaaaataggctataatcaggctatttagagc aaaataaggggccttcactttgacagctgaaaatattcttagatattaat aaacgggggggggtcctaataaggtccggggggttggaaaattttcgaaa aattaacaagcggggggggcaGTATAGAATTAGGAAATCGATAAATTTCG AGGTCAAGAAAGCtcatttattgtttttttcaatttttcttcaattttaa cTTCAAGTCATTCACTTCTTTTGTTTCTATTCCAGGAAATTCGTCGTCTT GAAGATGAGCTTGATGAATTGAAGAATAATTTGGTATAATTTTTACTGCT ATCAATTATTTTACTCTCTCATTGTTTGATTCTTTTCTAGTGTTGCAATA CAAACagtgtttttgtttatgttttctttttttaggatTCGGTTGATGGA AACACAGAGAAAAAGGTATTTGTACTTTGATGAATTATGTTTCTTTGTTT CCAACCACCTCAACAAACACATTGTAGATCACTCAAAAATGTTTCTATCC AGGGCAAACAAGTTTTTTTCACTGCTTGTATGAAAGATTTAACTGCCATC TTACGCAGATTATTACTTTAATAAGTATCTTCATTCTTCTCTCTTAGGAC CAAATTATTGATGATAAAGAACGGTATGAATTTGAttccttttgttttaa aacaaaaatatatcccatattttacaagcaaaagttTATCCTGGTAAGCT TACAACTaatcatcttttttatttttattttgacgcAGGAGTTGATAATT TTCTTGGTTTTCTGCTTTTGTTTAGTGAAATCCAAGCATTGACAAAGGAA TTGAAAGCCAAAGATGCAAGGTTTGAGGTTCGTTAATCATCTCATTAAAA TGCTTCTTGCTGTTCGTTTCGATCGAATTCACCCCTTTAAAGCTCATTGA CCCTTTCATCTTTTTGTTCTATAGAAGTTACAGAaagcaaaacaagaaaa tgatgaaagaCTAAACGCTGAGGTaaagtttttggaaatttctcTAAAGT TGCTGTTCTTTTTCGTTTATCAAACTTCTATTGAAATTTTAAACTCCACC TTCACTTTTTTGCCTAAAAGCCCTGATAGAAACAATCACTAAACCGTCCA AAATTTCAATACCACGGGGACACTCAAgttattggacctaccccggtggg gtggaggtcctataaattaacctgtgttcgttcgtctgttcgtctgttac caacttttctcaggattgaatcataggaatcttttgatttttggtagaaa ggtgcaaaatggtggtggccaaaatgtgacggagcccgattttcgaaaaa aaaattattggggcaaatttcagccgaaaaacggctaaaaaacgggtttt ttggactttgtgaaaaattggatcattaattttttctgattttttgaatg aaagtagggtaccatcataggtaaaagatggctcaagcagatttttgcaa aaaaattttgtttgctcaaaaaaacgcatgtttatctataagaatcacta ttaataagcatacatcaatgttcttagccaaattactcaattttttaatg agatagatgtttttttgctcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAACGGC TAAaaatattaataagcatacatcaatgttcttagtcaaattactcaatt tttttatgatatagatgtttttttgctcatggggcttacttttgaagaat atgtgtgtttagacatgaaacaTGGTTGCTTggtgtgtttttatagaaaa tggCCAAATgcgacatttttttataagcacattatcaattacttaggtat tagcttttctcgagattggctctttcattcatTATGAtcttttgcacaaa gatgcataactataaaccctcgaatgtgacggagcccgattttcgaaaaa aaatgtttttgggcaaatttgggctaaaaaacggctaaaaaacgggtttt tggactttgtgaaatattagatcattgttttttctgatttttttgcatga aagtaggtaaaagatggctcaagcagatatttgtaaaaaactaatttttc agctcaaaaaacgcgtctttatctataagaatcactattaataagcatac atcaatgttcttagccaaattactcaattttttaatgagatagatgtttt tttgctcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNCGAAGTcctgaatatgaaagaatatttcaagagcatgaa attttgatttctaaacgtttttttataagaaacaaatgactaattttaat agatcgtcactatttgtgctctgaatgattgtttaatgctTGCGCTCACG tatatatcaattatatatgtgttaaatgcataaccaggtaggtccataaa agtatcacttgttgagAGCTAGAATAGCTGAACAGATTCTtatgattttg ttttgattcgaaaGGTGCTTTGTTATCTTACCAATTACTTCCATTTCTAG GTTGAAGAATTAAAGGCTTCATTAGAGTCCAAAGAAGTCAATTTGAAGGT AGCTTGATTAATAAACTTAGACTATGATTTCTAGATTATGCTTATGGTAT AACTTTACAGGCgctattgatatttttgattcATGAATTTGCAACTTAGA GGTTGAAGGTGTATTATACCATCGCGAATGTTAAAGATTTTGTCTTGTAC ATCAACATCCTGATTAGTTAGATATAGAATCCCAAACACTTCCACCCAGG CactatggtgatagactctctacatTCACTCATATATCATTCTCTCTCAA TCCGGCTGGTAATCGAAGtttcgattgacgtcaaatgagcttagtaTAGT AAAggtcaaattgcagatgtagaacgataaacttgGTATACATAgttaaa ggttgtttttttcgGTTTTTCATCAAGAACTTTATTTGtataatttcttt gttttgtgcAGATTCTCAAAAGGGATGTTGATAAAATGGCTGCAAGTCCA GAACGTTCTAATCAACATTACAAGGTAGACTATGTACCGTATTATATTTT CACATTTTCTACACGTTCATCTCTCACTTTATCTTATTTTTGGTTGTGTG GCAAAATTTTGATGGAAGTTCATTTTGTAGCATATTTCAGTTTACTAATC TTTTGTTTTACTAGAAATTATATGAAGATCAAGGTCGTGAGATTCTTGTG AAGACCAAACAACTGAACGACATTACTAAagatttcgaaaagaaaactaa TTTGGTTGAGGTACCTATCCATGTTTTCAAAGCAGGTGGATTTTCGTCTC ATCCATCCAGTTTAgcaaaatttaatgaatttgGTTGAATCGTTTGTTAT AAAACTAACTGTTGAAACAATGTAGTATTCTATATGCTCTGATTCTGGTT TGCAATATGCTGTTTGGGTCACTCCATTGTATGATGTAACAGAATATTAA ATTGCACACTTGTAtcaatcaaaaattgaattgcATCTGACTTTGTTACA TGTTGCTATGAAttgttttgatatttgataACGTGAGATGGGCTTCCCAA AGTTTCTGATGAGGtcttaaaactttattttttcagggTTTGAAAGATCA TATAAATGGAATGGAAAAGTCAATGAAGGTAGGTTTTTTAAAAAGGGTTT TGTCTTAAATCAATTTGTTGCAAATATTTTGGTTTGCGAAATGCGTTTTC AAAAATACAGGGTGATTAAAAAAACCGCACCCCTTTGACTTTTTTAacgt aatttttttctgttAGTTGTATAGCCACACAATATTTGACACTCTTTCTC TTGCAAAGTTGGAGTCAAAGATTGAACTTGTTTACTGCTTTTGCAGGTCA TGCGTTCAAACCTTCATGAAAAAGAAATGGATAAACAAAGAGTCGTCAGT CAACTTCAAGAAAAACTAAAGGTTAATGAGAATAcccaaattataaattt ttttctgtaaatccAGATAATACAATACCACCATAATAGAAAAAACGGTT AATACCCAAAGTTCATATCTATTTCTGTAAATATGTGTCATATAATACAA TGCTTCATAGTTCGAACATATTTCTGGATTCTTCTTTCAGAACTATCAAA GCTTGCTGAATCAAAAAGATGAGGAGGTTAGTCTGCATGGAACTTAGTAT ACTTGGTCCATGATACTTttagtttttgaaaactttttttgactCCAATT ATTCTTTGAAAGCCTATACCTATCTGGATGTTGATATTTTACTTGTTGGT ATTTTCGGCTATGTTTAATCTCAAAGCTTAATGAGAAGAGTGGGATTTTG ATAATGTCACgagtgaagaaattttaaaagaatacaGAAGAATGAATGAG GGCAAAAAAAGGAACTTTGAACAAAATCAATTAGCttagaaaatttctaa aatttttaacgAGTGAGGTATACTTTTTGGGTACCCGATAGAGGCATACA AGAATTTTAGATCTCTCTCTAGAATAAAGAATTCTTTTCATAAAGCCCTT TTCATTTAtataatttcatatttttatttttttaacagaaTTCAGAAAAG TCAGAGTCGTTGGAATCCATGAAAGAAACTATagcaaaatcaaatcaaga ggttttgacttttttcttttgtaattgTGTGGGGCTGGCTTTTATAACGA CAATATTTAAAACGCcaataattcaaaaaacacCCGAACACACTTTTCCT CGTGTATAATTATACCGAAGATCATTCAACCTTCTAATTATTTCATAGCG CCTCCAATTTCAACTCCAATCCTCTCAAGAAAAAGATTCGCAAATGATTG AGTTGAATGTAAAAGTGAAGCAACAGCAGTTCGAAATCGAggtaaaaatg aattttaaaataaagataAGATTCTGTTTGTGATCTGAGCTTATTTTGAG TCATTTTTACTCTAAGGGAattcatttaatttttcaaaatatctttcttt tcagaaattgaaatatttattggaagaaaaagacaaagaagTGCTCGTAA GCCCCTTATGTAAAATACTTTCGGTTTTTCTTTGCTCGTTATCTGACCGA AGAAAAAGCGTATCGAGACAATCGCTTTCTCCTCCTTAAAAGTCTTTTAC ATTCAAGTTTTTTNAAAGGAAAAGCGTATCGAGACAATCGCTTTCTCCTC CTCAAAAGTCTTTTACATTCAAGTTTTTTTCTACTGTAAGGATTCTCAGT AAAGAGTCCCATATAACTCAACACTATTTTTTTCCAGTATTTTGGGAATA AGAATCTCCAATTAGAAGAGGAATCGACAAGGGAACGTAATGAGCAACTC CAATCTCTCGAACTTTTGAAGCAAGATGTCAAAGAGAAAGTCGCCCGTCT TCAAGCTGCATTGGATGGGTCACAGAAAAGCTATCAGGTATTTTCCTATG ATCATTTGAAAACAGTAAAGTAGCTTTAGAAATACGAGCAAAGCCTTTTT CAATCTTATGTTTTCATCGCTCAAATTCTTGAGATGCCTTGAGAGAGTTA CCAATAACATATGAGGAATCTTATTCAGCATTTATTagaaaattgtacaa aaatattttattaacaCTTTTTTTAAGTCTTTACAAGGCAGATTCAATCA GATGATGGATGAGAAAGATAAAACAATCGAAAGTGTAACTGGTGCTTTAA AATTTAAAGATGCCCTGATTAAGGTAAATAACTGTATGGTCTTTTCACGT GCACCTAGGTCGCGATGCTACCACAGATACACAAAACATAAACGCCGTAA AACGCACTAGTGACTTTTGCTTGCGCGATGGCGTAAGTTAAATTGCAACC TTAGTCGAAGGTAGCTGCCTACTCGTTGACGTTTCACGCGATGACCTCAC TTTGTGTCAATTTTCACCACTTCATATGTGTAAATAGTGTGCAATATTTT CCGAGGCTTTAGAAGTGTAAATTATACAAAAAACTCGTTTTCTATTCCAC TTCAAGGAGCTGTTGGCAACACCATCTGGCTTGAATGAAGATCAAGAAGC TATCACCAAAAAGCTTCAAAGCTCGTTCCAAATGCTTCAAAAACGATCCG AGGTAAGAAATCTTTTAGAACTTCTAATACCCTCAAACCCGATCTcctgt ttttttcaaaaatccctGCTTTTCCCTCCCAGCCTCCCGTTTGGATAGTT TGATAAAGCCAATTGTTTCTCCTTCATAGGATCAAGAATTGAAGTATTTA GATCAAATGCAAAACAAAGATAATGACATTCTGGATTTGACCAATCAAAT ACAACAAGCAACTCTTACCACCCAAAAATCACAAGCTTTCGTTTATAATC TGCAATCTAAAATCAAGGTAAGTTTTTCCTTTCATCATTGNTCTCTTACC AACCAAAAATCACAAGCTTTCGTTAATAATCTGCAATCTAAAATCAAGGT AAGTTTTTCCTTTCATCGTTGATTTCTATATTGAAAGCTTTCCACCAGCG ATATTTAGTACACGAGCTAGGCTGCTAAAATCCTCTAGTATGCTTTGTTA TCAGAAAACGCTCAGATAAACACGCTACACGCCGTCTGAACCTGTATCAA ACCGATACACGCAGTCTAGTCATCAGCTCAATGTGCTCATTGAATCTTTT CGGAATCGGTTTTGTACTTGTGCGATTCTGTATGCAATTTTGTATTCTGA CTGCTTTTGAATTGGTAAGTCATACATCAGATCCTCCTTCCATGTTATAC TTTACATATTTTTTCTATAGGGCTTGAACGCAAACGCTGACgaagataat gaaattttagACAAATTGAGGAACTCGTTGAAGAATGCAATCGATAAAGA GCGAGTAAGTTTATGAGCATTTTGTGgtcattctttttcattttaattct CTTGTGTTTAATTGTAGAGTTCTACTTCTTTTCACGAATAAAGTTAGTAA GCattcgttaattttttcagCAAGATTGGAGAGACTTAAGAGACTGCTTT GATCTTTGATCTTTAATTTATTTCTCTCACAGGCTTCAAGACAAGATTTG GTTGAAATGCTGAATGAAAAGGAggaagaaatatcaaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018428TCONS_00018428Clytia hemisphaericatranscript
TCONS_00018429TCONS_00018429Clytia hemisphaericatranscript
TCONS_00018430TCONS_00018430Clytia hemisphaericatranscript
TCONS_00018431TCONS_00018431Clytia hemisphaericatranscript
TCONS_00018432TCONS_00018432Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018428-proteinTCONS_00018428-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000300supercontigsc0000300:274581..285469 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.57 4.29 4.12 4.12 33.95 28.74 13.25 13.43 6.59 8.94 23.91 5.33 4.61 3.51 4.65 5.68 5.36 6.01 4.07 2.74 4.81 2.77 3.85 4.99 31.69 34 1.59 0.84 6.09 2.93