XLOC_010485 (gene) - C. hemisphaerica

Overview
NameXLOC_010485
Unique NameXLOC_010485
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000305:40495..47051-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010485 ID=XLOC_010485|Name=XLOC_010485|organism=Clytia hemisphaerica|type=gene|length=6557bp|location=Sequence derived from alignment at sc0000305:40495..47051- (Clytia hemisphaerica)
GTCTGCAAGGATTTCTGGTTTTCCATTCTTTTGGAGGAGGAACAGGATCT GGTTTCACATCTCTTCTCATGGAAGCTTTGTCTGTTGAGTACGGTAAAAA GTCCAAATTGGAATTCGCAATCTATCCAGCACCACAAATCTTCACAGCTG TCGTAGAACCTTACAATGCGATTCTGATGACGCATACAACGTTGGAACAT ACCGATTGTACATTCATGGTTGACAATGAAGCCATTTACGATATCTGTCA TCGTAACATTTGTATTGAACGTCCAACTTATACTAACTTGAACCGTTTGA TTGGTCAAATCGTCTCCTCTGTCACTGCTTCTTTGAGATTCGATGGTGCC TTGAATGTTGATTTAAACGAATTTCAAACCAATTTGGTGCCATATCCTAG AATCCATTTTCCATTGGCTACTTATGCTCCATTGATGTCTGCCGAAAAAG CATTCCATGAGCAAGTATGTTTTTGCGTAATATTTCATAGATGCATAGTT CGTATAAAAAACTCCGGTCTGGAGGGATAAGCTGGAGTTTTTACAAGCTC TTATTTGATTTGGTTGGTCGTTAACCTTTAATAAAACACTTTTGTTATTT TTTCTAAAGAACGCGTCATCTCTGTTACTTTTAATGACCAATTAGTGAAG TATCTTATAAAAACTCCAGAACATCCCGGTCTGGAAGCCTTTTGTTCCTT TATATTGTTTCAAACTTAGACTTGCGTTTAGAAATTAGTTTTTTTTTCTC ACTTTCTGATCATGTGATTAACTTTTGAACCAATGCCGATAGAAGTATTT GATAACGTGATAAAGAACTTAGCAAATCGATTTTTATAATCGTTATTAAA GTTAACAAATAGTTACAGCAACAGTTCAGACCAGTACTTTTTATACGGGT TTTGATAAATTACTATGCTGTTTCCTCGATTCAGGAACATAAAGGGAGTC TTGTTTTCTTATCATATCCTAATACCGCTTACTATAGAGTACATATTGTA AGTAGATAGCCCAGCAATCCAACACTTTTAGACAGTTTTCGATTGTTTGC ACAGGGTCCACGACCAGCCGGCTCGAATATCCATGAACATGAGCGGAGCA TCGGACGGGGCAGGGATGCGAACTGAAACCTTTAGTTTCAGCAGCTGGCT CTTTGATGAGCTTAACTAACTGACAGAGCTAATCCGGGGGGGGGGGGGTT ACTAAAGCAAAGCTGGTTACGGATATGCGCCGCTGGTCAGGGTACCTTTT TCACCTCCATGAGTCCCAGGTAGGGTCGCAAAAACACCAAAATAGAAAAA TTAGTCCCTCGTAGGGTGTCTATTTTGGAAAATTTGGGTAAAAAGTAGAA AATTTTGCAATTTCAGTCCCATTCAGGGTCACTTTTCCCTCAAATTTTGG CAATTTCTTTCAAAAAACCAGTCCCACGTAGGGTCCATTTTTCGAACCTC AGCGGAGCATCCCCGTCAGTCGGCAAGGGTAGTTACCCCCGGGGGAGCTA ATCATCATACAACTCGATTGTCCATCTTAAGTCGAGTTAAAACTTTCAGA GCCTACTTGAATACCCAGTTCTATTTAATTGCTGTGACCATAGTGATTTT TTTTATATTTTGCACGTACAAAAATACTACAACCTACCTGATGTAGCCCT CAAACTTAAGCATTTCATACATTTTCTGTTACGTTAACCATGTTATGGTT GGCATTCTCGAATCTAAAAATTCTAAAATCTTAATGAAAGAATTTGAGGA AAAAGAAAATGAAGACTTCTGCGAAGAAAAGAATATCGACTTTAAAATCT CATTTCAGCGAAGAAAATACATTCTGAAAATATTTTTGCCCTAGATAGGG TATCTTTTCCCGAATCAAAAACATATTTTCGGAAAATTTTTGTAAAAACT ACTTCTCTCAAAATCTCAAGAAAAGTGATTTTTGGCAAATGTTTCATGCA CATTTTTTAAAGAAAAATAGTCTGTCCATACACCAATTAAGAAAACCATT CCGGAAAAAAAAATTCTACTTTCAAAAAAATTTACTTTTAGAGCCTTCAA TATAAGATGGGTTTGTGTAGAATTCTGAATTTTTCAAGGCTACCTGACTG AAATTTTATTTATCATCACAGGTTTCTGTAGAAATGATAACTAAACAATG CTTCGAACCTGCCAATNATCATGGCAGGTTTCTGTAGAAATGATAACTAA ACAATGCTTCGAACCTGCCAATCAAATGGTCAAATGTGACCCTCGACATG GAAAATACATGGCTTGTTGTTTGCTCTATCGTGGTGATGTTGTCCCCAAA GACGTGAATTCTGCTATCAGTTTCATGAAGACCAAACGTAGCATTCAATT TGTTGATTGGTGTCCAACTGGATTCAAAGTTGGAATCAATTACCAGCCAC CAACTGTTGTCCCAGGGGGTGATTTGGTCAGAACTCAACGCGCTGTATGT ATGTTATCTAATACAACAGCTATTGTTGAGGCCTGGGCTCGACGTTGATC ATAAGTTTGATTTAATGTATGCCAAACGTGCTTTTGTACATTGGTTCGTG GGAGAAGGTATTTCATTCTTTCGTTTCTTATCATTGGGTGAAATACACGT TTTTTTATAAGAACAAACTATATAAAAACATAAGACTTCGATGACCAAAA TATTAAAAACAAGTTAAGAACATCCGAAAGGCTTAAAAATTTTTGAATGT TTTAATAAAAAAACGTGTAAGCTTCAAAAGTTTTGGAGTAATTGGGATTT GGACTGACTCTTCTGAAGTTTATTTCTGCACATTTATTTTGCTTGGCTTC TCGCCAAAATTATCAAATTCATTCCTCATTTGACCTGCATTTGATCTTAT TTTCAGCTAAAATAACCTTAATAATTATCATTTCAATCAGTCATTTACAA AGAAAAATTCGCTCAAGCTTTAGAAACTTAAATTGACAAAAAATTATTAA ACGGTTTGCAAGTCCGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNGGGGGGGGGGGGTATTTGGGCAAAAATGGGTG CTGAGTATGTGCGGACATTAAGGGTCGGGTTTTCCACCTTTCAAAGTCTC TCTAAGGGTTGGAAAATAAATCAGAAAGTTTTAAATTAGTCTCTCTAAGC GTCGGAGAATTCACGAATTTTAGGAAAATATTTTGATTTCGAGAGAAAAA TTGTAAAAAGTCTCTCTAAAGGTAAAACATTTTTCAAATATCGAAGAAAG TTTTTCAAAAAAGTCTCTCTAAGGGTCGGTTTTCGGAGGTCCCGTCCGCA CATACCCCTCATTCGCCAACCCAAGTACCCCCCTCCAAGGTTGCAAGTAG AGTAATAAATGTTAAATGTGCTGATTTAGTAATTTAAGAAACTCGAGCCT AAAATTGTTTAAGTTTTTTCCTGGTATTCGGCTAAATTTAAGTCAAACAT TCTTAAAGAGGGGCTGTTTAAAAAAGTCTGAATAAAAATCCTGTCAAAAT ACAGCTTCAGTGATTTGTGAAAAACAAGAAAAAACTAGTTCATTTTCGCA ATTGACAGAAATACTTGCAATAGAAATCTTGAAATATTTTACTGAATGTT TTTTTCTTTCCATGGTATTTCTCAATTTCTTAAGATTTTTATTGCTTCTT TTTGAGTAAGAAATGTTCTTTTGACTATTTTCCTGGACATTCAGAGTACT TTACCGTTCGGACTTGTTTGCAATAGATATTTAATAAATTGACGAGGAGA GAAGTCTGGCAGAGGGGTTTAGTTTTGTTTTTGATAGGCTGTTGAATGAA AAATTAACGCTGACAAATTCTTGATTTTAGGCCGGGAATAAAGCATGAAT ATGAATTCAGCAACGGAACCTAAAAATGCCATTTATAGAGTATTTTTAAC TGTAAATTGCCAATTAGCCCCCTATAAGTCTCAATAATTTCACATAAATG TCATTTTATGCTTCAGGTGTCTATTTCTTGGTAAATTTAGATTTAATTTT TATCCTAAGGATTTATCGTTAAAATGTTTAAGGGTGATTTCCCCAAAAAA GCGTTAAGAATATCTTTGATGAAATGAAGAATAAAACATTTTTATAAAAA AGTGGTCAGTCTGTGAAACGAACTTTTAGACTTTTTCGCCGAGCTTATAT AAAACCCCTGCTGTAGCAGACGGTTTTTTTCCAGGATTGTTGGTTAAACA TTTTCAAAGTAGATTCCTTCCTTCCAAGGAGCTGAAGTCAATTCAAAAAA ACCCCTGTGTCACAGACCCGCTGGTAGAAAAATTGGCAAAAATTTAGTCC CAGTGGGGAAAATACCCTAGAATTTCAGCACCACTGAGAAATTGACTTTG ATTTCTTCCCCATTCGAAATCCATTGCTTAGAAATTGCACTCAAAAACCA TCCCCATTGGATTTTTTAATCCTTGGAACAATAGAATTTTTATCCCCATT GAGATTTCAATCGAAAATTTTATCCCCGTTGCAAGAAAAAGTTTCACCGG GGCTGTGAGACAGGGGTGTTCAAAGGAAACCCTGTAATACGTAATACATG AACAAAAAGGAAAAACATCGCGTGCTGGCTTGATTTAAAGGTGAACACGC GATGTGATATGTGCGAGGGTTCTGCTTTTAAGTTGTTTTTGTAGACATTA CGACTTACCTGTTATCTTCTAAGCCGTTGTCAAATCTCGAAAACGAGATA TCATATAGATTTTTCCTTGTGCAGTATTACCCATTTAGTTTAAAGCCCCG AAGGGACAAGAGTAGAAACTTTTGGATGGGAAATAAAGCTACTTAATTTC CCATCTAGAACATTAGCACGTGATTTTTACACAAACACTGGCGGATTAAA AGTAAAGTCTATTGCTAGATTTCAAAAAAATGCAGTCCTCAAAAACATAG GAACATCTAGATACAATCCATCATCATGAGTGTGGCGCGTTCTAGGCACG TTCTGGATGGGAAATAAGTGGCTTCACTTTTCCTTTCCTGATAATGGTTA AAGGCTCTACTCTAGGCCTTCGCGCTTTAAACTCAATGGTATTACCTCCA ATACTGAAAATTATTTTACCAATCTTCTCCCACGATATACACTTTCTTGT ATATGATGCTCGGCTGTTAATACATTTTTGAGTTTCAAGTTTTTCTTATT CTGTTCTTATTTATAGTTTGAAATTAATGTATTTTAGGCTTTGCAACCAA TTTTGAACACTCAATTGCTTGAAATTGCATGAATTTCAGTCTCAGCATTG TTCTTAAATCGTTCTTATTTTTTGGCGATTTTGAGTCAAATTATTCTTGT AAAAATGTTCTTATAAAGTAAAAGGAGTGTATCATGCATCCTTTAACTTT TGTAAAATTGAAAAATATCAGAGTGCAATAACGGGTGTAAGTAATAAGCA AGAGGGATTTTTCAAATTTATTTGGCAAAATCTGTGTACGCGGGACGTAA ATTTGTATATGTTCAGAAAAATGTCCCCAAAAGTGCTACCTCCAACCGAA AAATGTCAACTTTGCTCTAAATAGAAGAATAGCTGTTTAACCAGCCAAAA GAAGCATTTACCTCGTAAATTTTATTGAAAATTAATTTTAGTAAAACTTT GGTTACTGTTTTTGTCGTTTTTTTCTTAATATACATTTAAAAAAAAAAAG TAAAAGTGTTACTAAAATTATATCGAGTTGGATGGAATTGCGGAAACGAG TACCCCCTGAACCAGCCTTAACCATAGATTTATAAAGCCCGAAGGGCTAG ATGGAGTGCTTTAAGCTCTTCCAAGCAAAAAAAAAAAAATGAATATCGCA GAAAATATTGCTGTTATTGTTTTCAAAAACCCACAAAGCTTTCTGATTGG TCAAGCGCTGAAATTCTATCGTAATGTCACGTGACTTAGGTAGGATTTTC TACCTAACCTCGGCACACTTTTCAGCAAAAGCACGATATCTAGCCCTTTG GGCTTTATAAATCTATGGCCTGAACCCCAACTTTTCATAGTATCGGATGA TTCGGGGACTGTCAAGCTTTAATGATTATTTTTTCCCTAAAGGAATGGAA GAAGGTGAATTTTCAGAGGCTCGTGAAGATTTGGCTGCTCTTGAAAAAGA TTACGAAGAAGTTGGATTGGATTCGTATGATCAAGAAGAAGAAGATGATA ATGAGTACTAAAAAAACTTTTCATACAAAACATTTTAAAATTCATTTGGA TTAACGAGACTAGGCACTAGAGTTTCCATACAAAACATTGTAAACTTCGC TTGGATTGACGAGACTAAATTCTGTATTGGCTAACGAAGTATAAATACTA TGCTTTTATGGAATATATTGTAAATTTAGCTTCAGTAAGTCTGGCAATAG TACATAACATGTAAGAAAGAATCATTTTTCCTGAAGAAATTTCATTCGCC TCCGCAAAAGCTCTGATTTAACGGCCCAAGACCTGAATTACCGGCCCAAG ACCTGCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018735TCONS_00018735Clytia hemisphaericatranscript
TCONS_00018734TCONS_00018734Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018734-proteinTCONS_00018734-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000305supercontigsc0000305:40495..47051 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.37 0.13 0.17 0.18 0.14 0.18 0.04 0.08 0.43 0.39 0.48 0.16 0.18 0.16 0.04 0.08 0.81 1.3 0.04 0.11 1.1 0.96 0.36 0.82 5.31 3.28 0.14 0 0.04 0.11