XLOC_010510 (gene) - C. hemisphaerica

Overview
NameXLOC_010510
Unique NameXLOC_010510
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000306:96802..100271+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010510 ID=XLOC_010510|Name=XLOC_010510|organism=Clytia hemisphaerica|type=gene|length=3470bp|location=Sequence derived from alignment at sc0000306:96802..100271+ (Clytia hemisphaerica)
CGGGGGTCCAATGTATGTCATCCACGATGACTTGACtataaaaatgttga
aagaTTAGGGCAATGTTGCTATTTTGTTTTCAGTTTCCTATAGAGAAACA
ATagaaacacaaaaataaaaaaggtataCTTGCAAAGACAGAGATTGACT
ATGGAAGGCGATAAAGAATTAAGGAAATCCATTCAAGCTAATTTGGGCCG
CTGGATCAAAAAGTTGAGTTGTGATGGTGATGCTGTTGAGAAATTaagat
ataaaatgaaatttgtgaAACAGTTGAAGGAAATGCCGATcgctatcaaa
acaaaagaagcaaATGATCAACATTATGAGGTAAATGCGATGTTTTGTAA
AAGTTTTCTCCTTCACACGGTTTCCTGTTAAAAGGATTNatcaattactt
aggtattagattgattggctctttcattttctacgattttttgcataaag
attcataattataaaccctcaaatgtgacgggcCCGATTTTTGGAGAGAN
tggacctaccccggtggaggtcctataaattaacctttgtccgtctgtcc
gtccgtctgtccgtccgtccgttagttaccagcttttctcaagattggct
cattagttttttctgacttttttcacaatgatgcaaaatggcaatgccca
aaatgtgacggagtccgattttcgaaaaaaaaatttttgNGGGgtatatt
tcagctaaaaaaacgtgacctaacttataaacgtgttaaatgcataatcc
aggtaggtccatcaaagtatcacttgttttggtcatttttcatgaTAACT
GATTAGTGGCAACTGGAAAGGGAAAGTCACTTGGAATAACAACCTTGGAC
AATCAGTATTTTGAAGGTTGAGGAGTGCCAAACATTAATCAAGGATCTTG
TCTATGAAAATATCCTTGCTTCATTCAGATTTCTAcacattttttcatgt
tttaaacTTCTGTAAAACTTTATCTTAAAGGTGGATACAGATTTTTATCT
CACTATCCTTGGAGACAGGTTGAAANagggtaccatcataggtataagat
ggctcaagcagatttttgcaaaaaaattttgttggctcaaaaaacgcatg
tttatctataagaatcaatattaataagcatacatcgatgttcttagtca
aGNAATACAGTAGTTGCTATTTCCCATCCGAGTCGAGTACATTAGAGGAG
GCTGAAGACTGCATGTTAGAGATGATTTGTGATAGAGCACGTGTTACCGA
TGGATTGAAAATAATGGATTTGGGATGTGGTTGGGGTGTGACTGGATTAT
ACATTGTGGAGAAATTCCGGAATTGTGATGTCACATGTATTTCCAATTCG
TCAACTCAAGCTGCATTGATCAACAAAAGGGCTGCTGAGAGAGGGTATGA
ATGTGGTTTTGTATTATTTAgagaagatttttttaaagacttccagttga
tacatttttatttgTTCTATATTTTGTCTAANaattcgatatttttttat
aagcacattatcaattacttaggtattggcttttctcgagattggctctt
tcattctttatgatttttacacatagatgcataactataaacccttgaat
gtgacaggacccgattttctaaaaaaaatgtttttgggcaaatttgggtN
TAAGTTTTCTCCTTCACACGGTTTCCTGTTAAAAggattaatttttttgg
tcatttttcatgaTAATTTATAAGTGGTTAACTGGAAAGGGATAGTCACT
TGGAATAACAACTGATGATTTCTTTTCCAAACTTTTGAGAATGTAAAACC
TTGGGTTGGAAAATCAGTATTTTAATGGTTGAAGAGTGCCAAACATTAAT
CAAGGATCTTGTCTATGAAAATATCCTTGCTTCATTCAGATTTCTAcaca
ttttttcatgttttaaacTTCTGTAAAACTTTATCTTTAAAGGTGGATAC
AGATTTTTATCTCACTATCCTTGGAGACAGGTTGAAATACAGTAGTTGCT
ATTTCCCATCCGAGTCGAGTACATTAGAGGAGGCTGAAGACTGCATGTTA
GAGATGATTTGTGATAGAGCACGTGTTACCGATGGATTGAAAATAATGGA
TTTGGGATGTGGTTGGGGTGTGACTGGATTATACATTGTGGAGAAATTCC
GGAATTGTGATGTCACATGTATTTCCAATTCGTCAACTCAAGCTGCACTG
ATCAACAAAAGGGCTGCTGAGAGAGGGTATGAATGTGGTTTTGTATTATT
TAGAGAAGATCTTTTAAAAGACTTCCAgttgatacatttttatttgTTCT
ATATTTTGTCTCAATGAttagtattttttcattaaattttgtcaTCCTTC
ATTAAAATCTAGCTCAAAATGACATCAGTCCCATCTGAAAAGCCAGAGAG
GATAGGAGAATTATAACAatacttttaaaaagtatttcttttaaacagGT
ATTCTAACAGATTGAGATGTATCACAGCTGATGCTAACGTCTTCACCACA
GAGGAAAGGTTTGACCGTATCATCTCTGTTGAAATGTTTGAGCACATGAA
GAATTATGATAACCTGATGTCTCGTGTATCTTCATGGTTGAAACCTGCTG
GTTACCTATTCACACATATTTTGTGTCACCGTGAATATTGTTATCACTTC
AAAGAGAGCAAGGATGAGGCTACTGGCTGGATGGCTAAACATTTTTTCAG
CGGTGGCACCATGCCTTCCAGCGATCTATTTCTGTATTTCCAGAAAGATT
TGAGTGTAGTTGACCACTGGAATGTCAATGGCATCCATTACTCAAGAACC
CTGGAGGCTTGGCTAGACCGGTTAGACGCCAACCGTGACCGTGTTTATGA
GATCTTGCACCGCCAACATGGAGATGAAACAGATAAGCAGATTTTTAACT
GGCGCATGTTTTTCATTTATTGTTCAGAAGTTTTCAAATATGATGGTGGC
AATGAATGGTTGGTGTCTCACCATTTGTTTCAAAAGAACCAACATTGCAA
ATTGTAGGCTCTGGTGATGTCGACAGAACTGATGTCTAAGTTAGATTAGA
TTATTGGTTGGAAGGCTTAAGAAAtggttttaattttattcaCTGTGTAG
GAAGATTTTCAGAATAAATTGAGAAACACGGCTGACTTAACCCGTGATAT
ATTCAaccaatagatcttatcggagtttttgatttttctaaaaaagcgat
gcattgttgGATTGTTTCAGGAGTattaaaatagaaatctcttaggaatt
cctcaagggaattctattgtagtactcccgaaacaatcccacaatgcatc
gtttttttagaaaaatcgaaaattccgataagatctattcatCAAATATA
TTGTAGATAATATGTAGACCAGCTTACTTTGATTGATATAATCAAAAAGT
TATAATATGATTTATACGTATTTTTGACTCTTTCTTTGATTTGAGTGCAA
ACTTTATTAATCATAACATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018767TCONS_00018767Clytia hemisphaericatranscript
TCONS_00018768TCONS_00018768Clytia hemisphaericatranscript
TCONS_00018769TCONS_00018769Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018768-proteinTCONS_00018768-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000306supercontigsc0000306:96802..100271 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
57.36	57.65	30.65	31.72	175.32	149.94	83.98	101.71	72.49	84.04	47.38	41.63	23.88	19.09	14.41	16.05	32.15	30.31	10.21	14.97	32.83	32.48	39.91	40.89	33.13	46.22	45.56	35.2	42.32	38.07