XLOC_010665 (gene) - C. hemisphaerica

Overview
NameXLOC_010665
Unique NameXLOC_010665
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000317:364078..372432+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010665 ID=XLOC_010665|Name=XLOC_010665|organism=Clytia hemisphaerica|type=gene|length=8355bp|location=Sequence derived from alignment at sc0000317:364078..372432+ (Clytia hemisphaerica)
TTGGTTGTGCAGTCAATATCAAGGCCCTCAGACCGCATTCTCCAGTTTCT
TGCCCGGGGTGCACGGGCTTGGTCATGTGgatttgttttaaaaacaaacg
aTGTTCCATCAATAAACATACCTATCTATTCTCTTAAAAATTCTTTGCTT
TTGCACGTGTTCTCACGAGCAAACTTGAGACATTTGCGCAAGTCCGTGGC
CTTTTTTCCGCAACTGTGAATACTTATAACCGGCTTTGTTCAGCCAGGAC
TCTTCTAACAGTATCAGGCGACAAATACATCCTCCGGCCTCCACTTGTAG
TCACTTTACAGTGAATGTTTCAATATCTCGTCAAAGCTGGGGCACCTTCC
GGAGAATCTGACGTCTATCATGGGCGGTAACTTTGGACGGTCTTCCTTTA
TTTTCATGGCGCTTGTCGGTTTGGACCTCCAACGAGCGATTAACATGGCG
ATATATTGTAGCGCGGTTATACTTGGGGAATTGTTTTCTGGTCTGCGGTA
TTAAAAGTTTTGGCTCTTGGTATAAAAGTCTCATATAAAGTGATTCCCTT
TCAGTTACTTTGTTAGTTGTGTTGatactcttttttttcttttttttctt
tttttgtgaaaaaaataaaacattataACAAATGAATTATTTTAACAAAc
attataccttatcggggaaaaaatgtcggagttttatttagtcgggtttt
tttttcgtcggggaaagatttcgtcacctagaggcattttggTCACTTTT
CCcctaccaaaatttcaaattcgtcactttcaccggactaaattgtccaa
aagaaatggtttccttcactgcTAGAATTCGATTAAGGCAACAATTAAAG
CGtgtataatattttgaaaaatagagtAATTGAACACGGTTATCGCAACC
ATATATCTTAAAGTTACCCAATCACGTAAGAATACAAAGATCTATTTTGC
AACCAGAAACTCtgtttattttgttgatttgaattatttttcagatAGTT
TTTGCAATTATTTTAGTTATTGCTGCATGCATACCAATATATTTGTTTTG
tataatttcagaaattttataaataaattatttgtatattttgaaatatt
tttgtataatGATGACATAAAAAATTGTAAACTTctcattaaattcaaaa
ttcttttcaaattacTTTTGAAATCAATTATTGTACCTTAAAGTCGAGAT
TGTATCACCTTTTAAAGCTAAACATGTAGATGTTCCAGATGGTAATAAAG
TTAacgtctcaaaagtatgtggacacttcacttttttgacaatttcttaG
CATCATTGCGTTCTAAATTCGTGTATTtcttttgctctaaaagagttgaC
AATTTGAGAGAAATGCACTGTATAGTAAtgaatttcaccaatttttcgtt
gcactgtaagggtgcaattttaaaagtcaTTTCGCCGCACATTCCATCAT
TTATATTAGTAAACCCCCGGGATTCCAGCACGAAATCTAACACAAAACAA
TAAATACACCGACCTGATATAAGGATATAAGACATGTTTCTGatatcatg
gaggtataaagaaagacaggagaagtatgctattgtaaccaagctcgccc
tacgattaaaaaagttacgatgtatgcatgctcNAATACAGAGTGATATT
ATAATCCAGATAAGAATGTTACTATAAGTCTTGTTTAATAGTGTTGATAA
TTTcaagatatgctttcatttcaatttccaaactattttctcaaaaaaat
ttaattttattatcaggtaggtccaaacaGCCCTGATAACGATGatagaa
ttttgtaaaaattgaaagattttctttgcatttttaaattaaagttaCCC
AATCAAAGAAGTTTTTTCGGACAAAATTTGGTTAGCGAGCAGATTTATCG
GAACGTTCGGCTAAAGATAAAACAGGACAACTTAACCGCTAATAATAATG
AAGACTTACCAGGAAGACACATCGCCCGGTTGGCCTTCATCTCATCGTTT
ATTCTGTATATTTCCAGTCCTAATTTCTCTTCGACTCTTCCGTGGCTGTG
AAATGTTATATAACGAGGATCTGTGTTCTCTTTCACAGCAAACGCATGAA
CCGTGTAGTTGGAATGTGATTCCATGAGACcaaatttctagaaaaatgAT
AAGTTTTTGCTTTTTGGTAATTTAGCACAGTTAGGATTTTTTCTCCAAGA
TTTCAGGAAAAAGGTGGGAGTGGAAAATGCTTACAATCTTTAAATTCCGA
CTCGAACAAGTCTTTGATCGGATCACCGAATATCTGGCTTTGTTCCCCAA
AGCCTGGTGTTGCGAAGTGGGTAAAGTTGTAaccgtttttatttttcttc
gcaaacaGTGTGATGCTGTGCATCTCTTGGTTCTGATGGAGTCCTGTAGA
ACAATTAAACTATACTATATAACATATCTcggattttcgcgaaaatttaa
atttactttaccGAGAAATCTTGAAGTAATGATCAAAAGGAGAATAGATA
ATAAAGTAGTACATTTGTCTGCCAATCATGCTTAACATACGTTATTCGGG
TCATTCCCGGTGGTACACAATCAATTGGTCGCTTCTTTTTCTTGACGAAC
CGGTGATGACCATTCTTACACAGACACCCTATGGTTGTTGAATGTGGCCA
ATACGTCGTACGTAGGACATTTCTAAGAGTATGAAAGGGAAGTTTTagag
gaaaaaaaatttaaacaaaatatttgtATGCAGCTATTTTCAAAACTTAT
TGGTATTCATTTTcatatttcatttaattttcgagaaaaagaGGCCCCAC
Agagtacaaaatgaaaaattatcaatgtaattgtaaaaatattcaaacat
tttcatcttcNaaatgaaaaattatcaatataattgtaaaaatattcgaa
cattttcatcttcattcagcATGTTTCCTACTGTCTATTGCTTGTTGATA
TTTATTGTATTTCCCTTTTAGAGAATTGTGTAAAACTTACTACTGTGTCG
GAGGAGGTACGTCGGTGTTTGAATGCATTTCTCAccttttttgccctttt
tgttGAGACAGTCTTGAACAAAGTATCTTAGATCCGTCCTGTCCATGGGT
ACCTGTTACTCACATGTTAGCTCTACCAATGAAGCCAGTGCCTTCTCTTC
TTCATGATCAAGAACGGTCGGACGTCCGTCGTCTTCTGAAACTGTTGCGG
TGAGCTCGCCTTTCGTGTTTGATTTTTCGGTCATTGTACCGACTTTCCTG
CTTCTAAAAATTAATTGACAATTTTGACATACCGATGCAATCATCAAAGA
CTCTGCGTGTAAATGCATGGAATGATTTCATATCATTCAAGGTTACCATT
CAATCTTCTGACGATTGGTTGATTGAATTAGTCCATTGGTTGAaccttga
aaaataattttagtttatTAGTTTCTTTAGCTTTGTCTATAAAGCCTTTA
TAGCATAAAGATTTAGTCTTTGCAGTGATAGTTTACAGTACCTCGTCCGT
AAAAGTAATGACGAAAAACAACTAAATTTATTGCATCCTCTGGCATTTTA
ACTAGAAATCCTGTCATGAAAAGTTATCCCATCAGGTTCCTTTATCAACG
GCAGGGGCATGTTTTGCTGATTTTCTacattgttgttattttctaaTTGC
TGGTCCTCAAAATcaagatgttctccatcatttATAAACATCTAAAGCTT
CCTCATCTTTATCAACTATCTCCTCATGTTTATCAACTATCTCCTCATCT
TTATCAACTATCTCCTCATCGACATCTAAGTTTATTCTTTCTAATATATC
Gtgtgtttcattttattttaagagagggttaacagtttttttttgctcat
ctATTCTCGACTATTCTTCTATGAATACATGATGACATGGCTTGATGTAT
TGAGATAAATTTTTTGTGTCTGCTGTCTTGTGTTGTTACAAATGAGGGTG
TAATCGTGGAAAGATGATGCGTAGAACAACAATCTTAGCAAAATATCATG
AGACACCTTGCAAATATAGCAAATTTAAGATTCCTCCTTCCCTAAAAACA
ATGTTGAGTGCAGTAACAGCTTGATTCCATAAACAACATTGACTGACTTT
CCTCCGTTACCAGACTCTCTTCCTTTGGTTGTGCAGTCAATATCAAAGCC
CTCAGACCGCATTCTCCAGTTTCTTGCCCCGGATGCACGGGCTTGGTCAT
GTGgatttgttttaaaaacaaacgaTGTTCCATCAATAAACATACCTATC
TATTCTCTTAAAAATTCTTTGCTTTTGCGTATGTTTTCACGAGCAAACTT
GAGACGTTTGTGCAAGTCCGTGGCTCTTATCAAGCCTTTTTCCCGCGACT
GTAAATACTTATAACCGGCTTTGTTTAGGACTCTTCTAACAGTATCATGC
GACAAATGCATAACTCCGGCTTCCACTTGTAGTCGCTTTACAGTGAATGT
TCCAATATCTCGTCAAAGCTGGGGCACCTTCCGGAGAATCTGACGTCTAT
CATTGGCGGTAACTTTGGACGGTCTTCCTTTATTTTCATGGCGCTTGTCG
GTTTGTTCCTCCAACGAGCGATTAACATGGCGATATATTGTAGCGTATAC
AATGGGGAAATTGTTTTCTGATCTGCGGTATTGAAAGTTTTGACTCTTGG
TACAAAAGTCTCATATAAAGTGATTCCCTTTCAGTTATTTTGTTACTTGT
GTTAATatactctttttttttctaatgtGAAAAGAATATAACATTATAAC
Aaatgtaatcgtcagccgtgcaaaattactcgaatctgattggtttagag
gagtgcgattaatcgttaattgcactattaccactttttgcactcttcgg
ctaaaaaaaactatgatttactaatgattatttactgacaaTTACCNagg
ggacacttttgtccccttattcttttctctttttttactatataataaaa
aaaaagactttttttttcttcaatataaaaaagaacaaaggaattttacg
ttacaatagcttcttttaattgaaaacaaaaaaattacactgaaatgttt
tctttttaaacaaaagaaaaaaagagggaaaaatataaaagttagaaaaa
gattctttttcaaaactatgatttactaatgattatttactgacgattac
ctcggaatcgtatgttttgtcgtgcaatNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtaatttgcact
cgtccttcggactcgtgcaaattactattttctcctttgttactcgtgat
taatcgttaattgcactccaaaccatacgattactagtacaaattatCAT
AACAAACattttaccttatcggggaaaaaaatgttggAGATTAATTTAgt
cggttttttttttcgtcggggaaaaatttctatcttcgtcacttttcccc
gaccaaaatttcaaattcgtcacttttctccgattaaaatttcaaattcg
tcacttccaccggactaaattgtccaaaagaaatggtttccttcactagc
tcgaaatcggatcttgtaattcgacgtttaaagcactaatttcggtaaat
aaaggtgtaaaaaaattagatttaaattttggtTGCGCTATGAAATTTTg
ggtaaatgttttggtcggtgaaaaatttcgtcactttccaCCGACATTTT
TTTCACCGATAAgatatactttaggcgtacaaactttcgcgagcagaaac
tttcgcgaggacgaaaaatcgcgaaattcatgacatttactttcgcgaat
ttaacggaaaaatatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNaaatatttttcgcgagcataaactttcgcgaatcaagacg
taaaattgagaatttccacatgaaaaaatagcttagagacacaaatactt
cttgggttggcttgaagcttgaaacatttgtcctttgacttattagtctt
ttagcaggctaaaaagtgccataaaagttatacattttattcaaagttcg
aagttttacagattttctattttgtcaagaatttttcgcgagcataaact
ttcgcgaatggcctttcctagaatttttaaagacatttactttcgcgaaa
agggccaaaattcgcgaaaatcgcgaaagtttctgctcgcgaaagtttct
acgcctaaagtacaaCTAAGAAAATGATAACTCAGTATTAAAGTTTAAAA
TCAAATGACAAAAGATGTGTATTGTGTCGCgttataattttttcaaagta
tcgTTTACGATAGACTGgtgtcgtttataatgcgtgtaatacagtagtat
gattaggcgttatatgataatacgattattgttacgggatatagttatct
acataaaagattttttgttcctTGCCATGAAGCAGTGTTGTAAGCCTCTG
ATTGGTCCGTTTTACAGTTTATTAACAANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTGGAGAAATGTTTGGAGAAATGTTTGGAGAAATGTCCTC
TCTGCTTCTGATTTGAGACTTGTCTCAAAACATAATCTTAAAGAATTACG
GAAACCGCAAAGGCGTTTACTCATTCGTTGGGGCAGCactaaacaaaaag
ttaaaaaaaactaataacgTATTCTCTGACCTTTTCTTCTCACAATTTCC
ATCATCTGCTTGTTTAGTGATTCAATAGTTTTGTTTATATAGTTCGGGCT
CAAGTTCATTATGGCGTTCTTTACTCGTGTactaaattcttcaaaagttt
cTTTTACAATCCTTTTCGCAAGTGCTTCCTCTTTTAAATTTGTCGCCAAG
ATCTTAAAGCATTTTTCAATAACGTTTACATCAGGTGACCGTGCAGGTAT
TGGAAATAACTCTGAACCGATATGAGCAAAGGCTTTTCCGGCTGCCTTTG
AGGTCTGCACGGGACAATTGTCCTGTAATATAAGTTTCGATTTATTAGAA
CAGCGCGATAAGGCTTCTGGGAATTTTCTCCGTATCATCCGTGAGAGCTT
AGCCCCGTTGAGCTTTCCCTCATATTGTTCACATAATACGACACCTGAGT
TGTGCGATATGCCAACCATAAAGGCGACTGACTTTCCTCCGTTACCCGAC
TTCCTTCCTTTAATTGTGCAGTCAATATCAAGGCCCTCAGACCGTTTTCT
CCAGTTTCTTGCCCCGGGTGCACGGGCTTGGTCATGTggatttgttttaa
aaagaaatgatgTTCCATCGATAAACATGCCTATCTCTTCCCTCCAAAAT
TCTTTGCTCTTGCGCATGTTCTGACGAGCAAACTTAAGGCGTTTGCGCAA
GTCNN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019025TCONS_00019025Clytia hemisphaericatranscript
TCONS_00019026TCONS_00019026Clytia hemisphaericatranscript
TCONS_00019027TCONS_00019027Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00019027-proteinTCONS_00019027-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000317supercontigsc0000317:364078..372432 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.63	2.32	0.8	0.71	452.03	290.65	245.44	265.7	35.42	60.83	72.77	37.64	31.3	39.83	14.03	20.44	19.99	14.84	2.35	10.15	6.49	6.19	5.75	7.29	122.37	133.84	3.5	2.65	3.04	3.62