XLOC_011442 (gene) - C. hemisphaerica

Overview
NameXLOC_011442
Unique NameXLOC_011442
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000355:229716..238850+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011442 ID=XLOC_011442|Name=XLOC_011442|organism=Clytia hemisphaerica|type=gene|length=9135bp|location=Sequence derived from alignment at sc0000355:229716..238850+ (Clytia hemisphaerica)
TTATAGGAAGATTATCAAGATTGAAACTTTATAAATTCAAATTATACAAA GATAAACAGAAAAACTATGGATTATCCTGATCCTGAAGATTTTTTAGACC AGGATGATTACGATTTGTATGAGAATCGTTTTCAAGATGAATTTGAAATG ATGGaggaatttgaaaatgaaaatacaacaaagaaaaagaatggTAAGTC AAATATACACCCTTTTTACGGTAGACGTGCTTACCATTTGATTacttaat tatccccctaaaacAAGATTCAATCTTTTTGACACTTAGTTTGGGGTTTA GGGTCGTGATAAACAGACAAAAATTGCCTGTGTGGCAATTGGTagctaca gtcgaaaaggttATTATGGCCGACCAACCTTCATTGAAACTGGCTGATGT AAGAATTTATTCTTATAACTAACAGAGTGTGTGTCTTACAAACCGTACTG AGTATGACCTTCAAACTCACTTTTTGAGAAACAACCATTTTAAGAGGCCC CCAAGCGGTTATCATAAGGGCTGTTTGGGACTTTTtctagcgtgattacg tgatttggaaattattttttcgtgaTTGCGAGATCAGAAGGCAAATCGTG ATTgtcatttgaaagattttttagccGTGATGcatgatttggactttttc aaaaggATGTGTGATTatccatttttttttgctgatttttgcgaTCGTGA gatttaaaaagacaaaaaattgcattATACAGTGACCAGActtaccgctg gggggcctcttttAGAAAGctcttggaaattttttctacATTCAATGTca tgaaaaaaaacatcaaaaaaagaataagtaactcgatttttttaatgttt cttcAAACAGATAAGGTTGATTTCACTGTTGAAAACAAGACAACCAAAAC TGCAAATGAACTTGACCGATCACTTTTGAAAGGCAGTTTGAAGAGAACTT CCACCTTCTTGGAATCAGATGATGATGAATTAATGTACAGTGATGAAgaa gataagaaaaaagaatCATCAAACGGGGCCAGCatcaaagaaaataattc aCCAATGAAAGGTatttattaaattaaaaatcctatttctttcaaaaata agtACCATTTGAATTTTGCCTAACAGATGAtcatttaatattttcaaatt gataTATGCCTCTTTGTTAATGGAAAAAGGTCTCTGTTACCACAATTTAC AGGGTATTGTTGAAAGCTACTAATTATGATTTTGGTATATATTTTTATCA AGAACCATTTAAAAATATTCTATTTTAATAATTGGAGAGGTAGAAATTTT AACAGAAAAGAGAATGGCGGAAGCACGTAAACATGATGGAAAGCTCTCTT TTATAACACAACCAAATGTTTGATATTAAGATTTAAGATACTGCTGTCAA TCAGGGTTAACTTTCATAGCAACCAGATTgcacatttttggacctacccc ggtggggtggaggtcctataagttaacctgtgtttgttcgtccgtccgtc cgttcgttcgttcgtttgtttgtctgttaccaacttttctcaggattgaa tcataggaatcttttgatttttggtataaaggtgcaaaatgatggtggcc aaaatgtgacggagctcgattttcaaaaaaacaaattttgggcaaatttg ggccaaaaaacggctaaaatacGGGTTTTtcagactttgtgaaaaattgg atcattaattttttctgattttttgcatgaaagtaggtctagatatgaaa ttttggttgcttggcaatgttcttagtcaaattactcaatttttttatga gatatatgtttttttttgctcatgagggcttacttttgaagaatatctGT GTTAGCCATGCAATTTTGGTTGCtttgcgtgtttttatagaaaaactggc cgaattcgatatttttttataagcacattataaATTACTTAGGTAtaagc ttttctcgagattggctctttcattctttatgattttttgcacaaagatg cataactataaaccctcgaatgtgatggagcttgatttttcgaaaaaaga tttttgggtaaatttcagctaaaaaacggctaaaaaaagggttttttgca tgaaattaggtaaaagatggctcaagcagatttttgtaaaaaaatatttt ttcagctcaaaaaacgcatttttatctataagaatcactattaataagca tacatcaatgttcttagccaaattactcaatttttttatgagatatatgt tttttttgctcacgaagtcttgaatatgaaagaatatttcaagagcatga aattttggtttccaagcgttttttttataagaaacaaacgactaatttta atagatcgtcactatttgtgttctgaatgattgtttaatggtcaagctca cgtagatatcaattatatatgtgttaaatgcataaccaggtaggtccata aaagtatcacttgttcatcCTAGAATTATaatttatatttgtaagtcaga ATACTGCAACGTGACATTTTTACATTACATTTTAAGCCAGCTAGCATGAT TTAAACTAAAGCTTGCAGATCAGAAGAGTTCCCTGGTAGGAGGCTATGAA AGTTACTCCTCCCTGACGAAAGCAACTCTAAATGGATGGTGCCACTTTTA AGCACTTGGTTATACATTTCTTCTCCTTACCTTTTGATTATtagaaaaat gtacaaaaaagttgaaatttgatGAACCATCACCACCATCAGAAACAATA ACACCTCAAAGTCAAGCTTCAAAAGAATTATCAGAATTGAGACAAAGATT ACAAGGCAATATAGAGGATGATGCAGATGATTTTGATGAACAGCAATACA ATAATACAAGACAACGTGTTTTTCGTAGACCTTTACTTGGGTATGACATG GTGAATGTAACAAATACAGAAGGTGATCGGGTTTTCTTGAAATTGTCACC TGATACTGAACACGAAAAGTCAAAGGTATgccttatttttattttttcag tttgCAACAGCGTTCAGTGTTTTGCCATTCCAGACAGTTTTCCCTCATTA CAAAGTACAAAATGAGGCTCTGTTTAAAAATGctgcaaaattttaaagaa tctTGGCTAATTTCTAGTGTAAATTTGTGTACAGCTCTTTGCTTTTAGCA CTGTAGTTGCTAAATTTAAAATAACAACATTCTCATTTCAATGCCTTTGC GTTTACAGCCTTTTGGGTTTGTTGATGATTAGGATTGCTAAGCGGTAAGA CTGTATAGTTTGTGTAATTTTAGTTAAAATGTTggtaaaattttaagaat aaatgttcatttttatttcaggtCACATTTCGTGATACAGATGGTCGGTT GAATTTGCTCTCCGTTCCATTTGAAGATCTGCTCTCAGAAGTCAATGAAA AGGTTGACATTTTACCTTTATAGCATCTGAGAAAGCCTTCAAAATCCtga attttaacattttgatttgatgatttcactgaagattggtgCCAGAGCAC CAATGAAACTCTTGAGTTTGATGGATATTgagtcaactctttattataga TCAGTTCATgatttgattaatttttaatATAGATTTTTCCTGCAAAGTTT AACTTTCTgttgtatttttaaattttagagaCATCAGAATTTAATCCAGC GCCGTGCCATTAACAGGTAACATTGATTTTCATATGTTGACAAATAATTA TACAATTATGATTATCTGTCGAGGATTAAAGAGTATTTTTGGGAAAAGTT TTTGTGTGCATTTTTGGGCCCTGACAACAACGAGCAATCAAATTCACCAA GTTCACCATATATTGCGAGGTTCACTTCGTTCAATGTTATGAAattcatt ttactttttagttCTGATCGTCGTGTTCCTGACATAAGAGGGACAAAAGA CCTGGCTTTATGGGTGGATAAATATTCCCCTCATAAATACACTGAACTTC TAAGTGATGATGTAAGTATCGTtctgattttttaaataattatacTTAAT TAAGAAACACCATTTAACGAATCTACTACCATTTGCTTACCCAAGAAAAT TAACACTTTATCCCCTTTCCGTGCAGCACAAGCACAGATTTTTAGAAATT CCATTgtttattctgctttgtcagcatagaggcATGCCTCCTTTCTTAGA CAATTGACCTGTATAAGACTATATCGAAAATAGAATAACAATGGaaataa atctttaaaaaatgatgGACTTCATTCAGACTTAAGTGTGCCTTGTCGAC TTGTTATAGCTAATGATTTGTTTTTACTCAAATCTTTTAGTTAGTAAACT AAACATGTCAAAGaggaattttgattttaaccatTCACAAAGAAATTCAC AAGCTAAGATTTTCACCTCCGGCCTATTGCTTGTTTTGGAAACTTGACTG GAAATGTTTGGtttcaaaattattaaaaattggTCTTTACACAATCGAAA CCTACAATATCacttttgaatattgaattttcaaaattaatccCTCAATA AAACATTTTAGAGGCGGAAAATATGAGGTGGTTCGGTGAACACAAGATAT CTTTTAGCCAAATATTTTAAAGGATCTGATTATCTCACAAAAGCACTTCT CAGTCTGCTCCTGTAAAGAATCCTTCATTATAACACCCATGCGCAATTTG TCGTTCTCTAAACCATGTGTAGTTAATCTTTGTAATGAACAAAGAGGATC AAAACATGGGGTGGACAAACTATCCGGTTTGGGGCTGTGGATTGCGTAAc ctgtcgttctttttgtctattttttgcaaatgtaggattctttagaCTAA ACTCCCTCTCTATTGTTTAGGGAACAAACCGACTTTTATTGAAATGGTTG AAGCTCTGGGATAACGTTGTTTTTCACGAAGGGAAAGCAATCAATACAAA ACGTTTCACcaataacaacaacaataacaaatttcaaaataaagatggTG GATTCAagaaacaagatggcggcaagTTTAAACGGAGAGATTTCACTAAA TCAACGTTTGCAAGTAGACAAGCTATTTTGGAAGAGGAGCTGGTATTAAT TTTATTCCTTGCCTtccttttacacgttttttttagaaCAAACTAATAAA Ccagaatattaagaacaagttaaggttttgtttcataggaaaatggacaa aaatactcttaaaatggtggaaataaTTACATGTtagaacattttgaaaa ctcaaaacatccaaaggcttcaaagattttggatcttataaaaaaacgtg tttcacCATCTAGAGCCTTATTTAGAGTCTGGCATTCTTTGCATCATCCT TCAAATATTTGCCAGTTCTTGTGAATCAATTAAATGGCTTTCCTCGAAAA TTTTATAACATCACTTAAAATAGAATGAGACTTTTTAATTGTGACCCATG CAAATGATTTTTATCTTAATGCCAACTGCCGAATTTTCTTCATTAACTGC TCTTTTCCTTACTACCTCGTATAAAGCCTTTGTCTCTTCTTAACCTAAGT GTTTCTATTATAACCAGTAGAAAACCAAAatgattttcctatttttcttt tccattttaggTTCATGATAAAAAGGGAAGACCGAAAATGAAGGTACATT CCATTTTTCGGGTCAGGGTTgtttagcattctagctcattttctgaaaaa tttgctttgaccacccctgatataATACCATATTTATACATATATAGGTG TATCTTTTATAGAACTAAAgttattttttcggaaaatttttctaaaagct tatttgcttcaaaaacttgaaaatagtgctttttgaccaattttccatcc caatttttcatagaaaacagccataacttttgatgcattaatttagaaaa attttccgaaaaatttaaaacagttcaattctttgcggacagtttgaaaa aacttcgaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTCGAG GATTAAAGAGTATTTTTGGGAAAAGTTTTTGTGTGCATTTTTGGGCCCTG ACAACAACGAGCAATCGAATTCACCAAGTTCACCATATATTGCGAAGTTC ACTTCGTTCAATGTTATGAAattcattttactttttagttCTGATCGTCG TGTTCCTGACATAAGAGGCACAAAAGACCTGGCTTTATGGGTGGATAAAT ATTCGCCTCATAAATACACTGAACTTCTAAGTGATGATGTAAGTATCGTt ctgattttttaaataattatacTTAATTAAGAAACACCATTTAACGAATC TACTACCATTTGCTTACCCAAGAAAATTAACACTTTATCCCCTTTCCGTG CAGCACAAGCACAGATTTTTAGAAATTCCATTgtttattctgctttgtca gcatagaggcATGCCTCCTTTCTTAGACAATTGACCTGTATAAGACTATA TCGAAAATAGAATAACTATGGaaataaatctttaaaaaatgatgGACTTC ATTTAGACTTAAGTGTGCCTTGTCGACTTGTTATAGCTAATGATTTGTTT TTACTCAAATCTTTTAGTTAGTAAACTAAACATGTCAAAGaggaattttg attttaaccatTCACAAAGAAATTCACAAGCTAAGATTTTCACCTCCGGC CTATTGCTTGTTTTGGAAACTTGACTGGAAATGTTTGGtttcaaaattat taaaaattggTCTTTACACAATCGAAACCTACAATATCacttttgaatat tgaattttcaaaattaatccCTCAATAAAACATTTTAGAGGCGGAAAATA TGAGGTGGTTCGGTGAACACAAGATATCTTTTAGCCAAATATTTTAAAGG ATCTGATTATCTCACAAAAGCACTTCTCAGTCTGCTCCTGTAAAGAATCC TTCATTATAACACCCATGCGCAATTTGTCGTTCTCTAAACCATGNagtaa tttataaaggcaattctttgttaaaagtgttaaagaacctgaaatataac ttttatgttcaaatactaaaatcaaattttccgactatggtcagagcctt tAAGGTAGATACTTCGATTATAAAGAAGCGATCGTGGCGCACGCTCAAAG TTTGATATTGATCATATGAGCCTTCCCCATTGGGGGATGGGTCATACTCC TTACAAAGTAGGAATTAGGAATGTACCGATAGTAAAGCAATTTGATGATA CTTTTCGGCACTGGGCACCGGACAGTTCGGTGCATCGGCAGGATCGTCCT AATAACTGTGATTATTTACACCGATAGTAAAGCAATTgaacatttttctt tcagattGCTTTGCTCTGTGGAAACCCAGGGCTTGGTAAGACGACATTAG CGCATGTCATTTCGAAACATGCTGGATATAACGTCATTGAAATGAATGCC AGGTATGTAGCAGTGTCTTGTGTTCATTGTTTGGATACGAACGGCATAAG TTAAGAAGTTTAAAAAAGCTCTGATGGTCAACTAAAAagttctattgttt tttttacatacaaaacaatgcaatgggcttaaaaatatgctcaactgagg atattgatttttcgaagtatcgaaccccctggatatcctactttattagt aaaaaccccctggatatccactcttaaaaatatgctcaaccccctggata tcctctcttataaagatgcttacccctggatatcgtatttttttacttga aaagacactttacccctggatatccgctcccttttagatatttaaccccc tggatatccatttttgaacaaaaatctttaaccccctggatatttatctg gcacccagatggtgaaattttcatccgacacgctaaagctctgaaggtcg ggaaaattttcaacatctggaaggacTGCGTCAAAGAATTTTGTaacggg aggtctggtaacccagccctcgttttcggggattggcgggtccaaccgaa atatttataggtttacgtacaagggctgttgaacccgactgggggtgagg cacatcaaaggccgactatcattcctctccgatgggaaattggcccgctc ctttagagctttagcgtgggcggccgccaatccgccatcggaatatcaga taacctggatatccgatatcctcaacaggggggcacggactatttctagA AAAGCCCAATCCACCATCTGTGAGTTTGGAAACAGCTTGAAGTTTTACTT TATATCCGATCCTTGCTTTGACCCTTTTGAATCTAGGGCACCGCAAGGTC ACCTTGCTAACGGCCCTATGTGGCCGTTCGAGTCAAATAAGAAACAAAAT CAGACCCTAAACTTCTTTCATTGGATGTTTGAAATACTTAACTCTataca gaaaaatatttccatttttttgaatgtCCATTTTCAGTGACGATCGTTCA ACAGAGATATTTCGCAATCGAATCGAATCATCGGTTCAAATGAAAGCTAC AGTCACTAGTCACAAGAAACCAAATTGTTTGATCATTGATGAAATTGATG GAGCTCCCGCTGTATGTTCTTttgattatctttccaacaatctCTTTCTC TATCATGCCTTTTTTCTAATCTTCTCTTTTAATTTATCATGGTGTGATAG AATTTGTCAAGGCTTTATAACTAGGTTTATCCCATCATTTTGACTTTTAG GCAGAATCACCCTAAGAGATAACTTAGTAgagagattatgtatcggagat attctacggctacggttgcggggctgcccgtgcgggtcgtcaccaaaggc gacatgtcgttgtctactttgctctgtacgggaaaaacaccaaaacaccg tataagcaaagtcgacataatgccgtacgtcaaatatcgaacttgctttc acccgccattacttgctttactcgccatttccctcgccacttTAACCGTA GCTGTAGAGATTTCCAGATACATAATACACTTCATTTTAGGCTGCAATCA ATATTCTAACAGAACTCTGCAAGACAACTGATAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020366TCONS_00020366Clytia hemisphaericatranscript
TCONS_00020367TCONS_00020367Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020366-proteinTCONS_00020366-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000355supercontigsc0000355:229716..238850 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.58 19.21 8.58 6.44 14.82 11.31 11.64 11.87 9.7 11.52 7.42 4.98 4.39 4.69 8.14 9.66 10.86 12.82 1.54 2.68 7.46 6.82 16.52 17.5 15.22 14.23 3.87 2.54 10.65 12.11