XLOC_011469 (gene) - C. hemisphaerica

Overview
NameXLOC_011469
Unique NameXLOC_011469
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000356:229673..234119+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011469 ID=XLOC_011469|Name=XLOC_011469|organism=Clytia hemisphaerica|type=gene|length=4447bp|location=Sequence derived from alignment at sc0000356:229673..234119+ (Clytia hemisphaerica)
TGCAGAATCACCAGTCGAATGTATATTAGAATGTCAAAAAGTATTGACAT
GTGGGTATTTTGTTGACACGACAAAAACCTGTTTCTGCATGAAGAATGAa
gatcaaaagattttttcaattgaagatgaaaatctAAATGGAACGTTTTA
TCAACAGGACCAACAGGTATGAGACCaagggtacacgtttttttttagat
aGTGTTTTTTACCTGAGGGTGAAGTATGCTTAGGAATTTTCTGAATGTGA
GCGTGAATTTTCATAAAGAAATCAATGTTCATCACGAAGAAAACACGAAG
gaattttcgatatttttcatttattagtcTGAGGGTCTGGGGCGGGTCCA
TCACAATATCTTATGTTTTTACATCATGTTAGCGAAAACATTTTACGTAT
AATAAACGCAACAAGTCATCAAAAATTaagctcattttttatttttcctg
cCATATATATTCCTGTTCATTCGAAAAACCCAAACCTCGAGGTATTCTTG
ATATTTAGTTGATTTTCACCCctgaagacttttaaacgggtatagcctat
ttcattacctaactcaagataattcacgcagaagatgctatatatggtca
attttagaccaaaatctGGCGAAAAGttgaacttgcgcatgaaatatcac
GAGCtaggtaaggaaatcggctataaccgtttaaaagtcttttatatagt
tttttcgaGGGCTTTctaatggtatacttgataatgtctgaaaatgagtt
tgaaattttcaaaaaattttgcccttagggttttgcctgggggaaaaaag
aaatgtcccaaaaaaaggatgttccaccagtgggattttaggggattttt
tcctgaggcatagccatcctatagagaaggtcgggagaaagtttcagctg
gatcttaatcttatttttttcctacaaacagcctgtatttttgtaacact
aCCACactaggggtcaaagtagtaacaATTGGGTATAGAGCCTAAAATGC
CTAaaataaaacctaaaaataagaacaggataagaacaattttaaactaa
aaataccaaaagaaATGGGAACAGCCGAgcatcagcaaaattttactggt
tcttataaaaaagtgtaaaccttgaaataacgttgtgtgccagcttggaa
GGACTTACCAAAGAACAAAAACTTAACTCCGTAAGTAACTGCTGTGAGAT
TTGAGCCTGAAGTTATAACAATCCATATTCTCATTCATTTTCTTTAGGGT
AGTGTTTGCCCAGATATACAAAGAAAGAGTTGTCAAAAAGTGAAAGAAGA
CTGCCCAACAAGCCCATCAGGTTTTTATCACATTGAAATCGATGGTCAAA
TAGTGAAGGCGTTTTGTGACTTAGAAGTTGAAGGAGGTAAGGTTGCGTAC
AATAACGCGTTCTGTATAAGAACGGAGtataataagaacataaggcttgg
aTAAAgaatctaagaacattttaaggataTTTTTTAAGCTTGCATGTTCA
TGCTCAAAATATGCGATTTCTTTCagttaaaaacacaaaaaattattcta
aaaagaGGAAAACATTTTAGGCATACACTAATTTttgtaagcataacgtt
tataagcatcccggggggggggggggggaaaaaaaaagcccggggggggg
gggggaaaaaaaaagcccggggggggggggggaaaaaaaaagcccggggg
gggggggggaaaaaaaaagcccggggggggggggggaaaaaaaaagcccg
ggggggggggggggcctaagtgactcccgggggggggggggcaagctaaa
tgactgacgggtatgtgcgggcaccaagggtgtgtttttcaaggtatccg
aaatgcactgtaaagggTGGGTTTTTTGCCGCCTGCACTGTAAAGGTAcg
aatttctaaattctaacaaaaatgaaattgtccagttaaagtttttttaa
gggaTTCAATCGCCTTTACCTaattttttgcaaatattgGATCAAGTACG
TATTGGATCCATTTTTAGAtgcaaaatctttgtttgaccCATTTCAATCA
CTTCAGGGAAAAAAGCTAGACTGCACTTTAAGGGTATTCAACATGGCGaa
agatgcactgtaagggtttattttttggggaaaaccactgcactgtaagg
gtgcgattttgaACGGCAATTTttagcccgcacataccgtcagtccaaaa
tctgactgcccccccccccgggataagcatacttaggctcaaactcagta
aaaaataagcataatgctaagcatacctccaataagctgaaatgcaaaaa
aacttGTGCAGCAtttctaaaacgctgaccttttatggttacttttaaag
ctgtttttgCTTTCTTAGATCAAAGATTTTCGCCTGCAGTGCCAAATTAC
AAAAGAAAGGACGAAGTCTAAGCATAAATTAAAGGCTGAAAATGAGGTTT
TGCTAAACATACTGAGCCTCGACCCAAtttcccgtatgcttataaacaaa
aagagtgtacctggaggtcctataaattaactccTGTTagttcaaaattt
tggatgctcttataaaaaacgtgtaatgcctaaaaagtgagtGACAGTAC
TGCTGACGGAGCGCcaattccgaaaaaaaaataaagaaaagttgCGTGTC
ATCATAtacatttatttataagaacaaaaatgaATGTTGCCAGAatgata
agaatattttaaggctttgtggactctgaaacacccgatttcaaaggaaa
atggataaaaatattcaaaaaatggcgaaaaaaagaacatgttaatataa
gaacatcccaaggcttcaaaagttttgaatgttctaataaaaaaacgtgt
aagtaaAAATGGTTAAAGCAAATTTTTGCCGAAGTCTATAGAAATAAATC
TTTACCTATAACTTATAAGGAAAAGTTCTTAATTCAAATTGGCCATTTTT
CTGATAAGCATCTTGGTTTTTatgtgaaattttgattttgaaagaaaaga
caTGAAGAACGGGCCTGAGATTTGGCCAGATAAACATGCTTTTCAAGGAA
GAATGAGCTGACTTTCATCTTTATTTATATAAGCAAATTGCTAACGAATT
AGTTACCAGTTTTCCTggtgatttttttgcacaaagatgtgtcaACAGAA
ACCTCCGAATGTAAAAGAGACCGATTATTGGGGACTATTAATGGCTCAGA
TAGATTTGTCTTGAATGTTCTTTTTTGCTCCGAGATGAATTGTGctcttc
tagaaaaaaattgaatatgagtTTTTGGCAATTTACCCCCGAACATTAAG
ATTTTTGACCCCCAAACAGGAGATCTAACCCCTCGAACGAGCATCAGCTG
ACCCCTCGGACATTGAAAATTATCCCCGAACAGAGCAATTTTACCCCAAA
ACAGAGCAGATTTTACCCCCCCCCTGGACAAGGCAATCTTTGTAGATTTT
TAACTACTCCCCGGACGAACAAGTTTACTCCCCGGACGAACAAGTTTACA
CCCCGGAAAAGgcatttttgtagatttttcacgaACCCCCtcccccatgt
acgaacattttcttgaaaagcccatttttggcaaaaaaggcACTTTAAGC
CCATATTAATTTCTttgccaaattattattttttgagaatCTGACTCAAA
AAGTGAAATTCTGTCATGCAAATACTGTAgatattttttaataagaacaa
acttcaTAAGGCTTTTTAAGGGCCAAAATACTGTGGAACAATTTTAATAA
CACCCtggcgaaaaaaataaaaaataaaaaatcatgctTCAATTCATATT
TAGGTGGTTGGCTCGGTATAGCAAATATCACTTTCAACGATGCAAGTATT
ATGCAAATTTATCTTGGCTACGTAAATAACGAAGCACCTGTTTCAGACCT
CCAAAATATAGGGGATGGCAAATTCATGTTGGACGGACAAGTTGTTAAGA
GGTTGTTCACTGAACATGGCTATACAGAAGTTCGAGGtaaatgcttcaaa
aattggCATGGTCGGACACtgcattttattttgtttggaGAAGAAACGGT
CAAATACATGAGGAAGGAAGAAATGACGACGCATGGTTCATGCCAAAAGG
CCCGATATTTGTCGGACGACACATCTTATACGGCTCGAACTGATTGTTCA
ACAATTTGGATTGGCTATGGGCTAAGTCATCCTTATCATTATCATTTGCT
TTGGAAAGCTGCAACCTATCATGTTATGTTGCACAACAGATTTGCATGTG
ATGATAGTCACTTTTCTAACGCATTCACTAATACTGGATATTGGCTCTTC
TTTGTAAGATAATTTCACTTCTTTCGTACGCATATAGGGGCTTTCCATTT
TAACGAGTTTActtttagaccatgttcagactttacggtttcgtatcgtt
tcgaaacgaaacggttccaaAACAAATGTAACTTCagaattcgaaac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020414TCONS_00020414Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020414-proteinTCONS_00020414-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000356supercontigsc0000356:229673..234119 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.09	0.11	0.11	0.13	0.05	0.25	0.35	0.16	0.1	0.15	0.13	3.19	1.56	0	0.03	0	0.04	18.45	18.08	0.23	0.2	0.33	0.7	0.26	0.05	0	0	0	0.11