XLOC_011505 (gene) - C. hemisphaerica

Overview
NameXLOC_011505
Unique NameXLOC_011505
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000357:24290..30869+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011505 ID=XLOC_011505|Name=XLOC_011505|organism=Clytia hemisphaerica|type=gene|length=6580bp|location=Sequence derived from alignment at sc0000357:24290..30869+ (Clytia hemisphaerica)
CGGTACGCTAAAAACTTatataaatattattttttgttttcagataAATA CTGAAAACTTGATGCTGAAGTTCATCAACACATTGACTGGTCATTATGGT CTCACTGAAGGTTGCAGTTTTAGCATTGTGCTATTTGGCTTTATCTTCAG CTAAAAGCATCAATCTTGAAAGTAAGTTTTTTCTCGAAGAAATTCGAGAG AACTTTTTCCATATTCCAAGTATATATCAATGTAGGTGGTCAATAAAAAA GGACcatcaaatttttgtattaaatCTCTTGATTTCCTCAATCAGGGCAT ACTTGATTTTAGTTGCCTCCTCCCGGACCTGTGCTCCGTGTAGTTGGAAG CTTCCGAAGGTACAAGATACCGAAataccttcatttttttcatgGCGAAC TGGCCAGAAATTTCTCTACTATCGGAAGTTTGGCATTTCAATACTAGAAT ACCAGTCGCTAGTTGCCTCTTACGAACTCGTGCTCATTGTAGATAGCCTT ATTTCCTATGAATTTCTGGAAGTCTGCTATTCAAAACTATCATCGACAAT TAATTTTGTTTTCAGAGGCAGAAGATGGTTACTTATTTGAAGGTGACATG GTGATGTCCAAACAAGACATCGAGCAAAGTTTAGCAGGTGGTCCATCCAA AGAAAGCGAGAATTTGTTTGGGTTATCGAAGAGTCAATACAAAAGATGGC CAAATGGTGTTGTCCCCTATACTCTGGATTCCTCCATCAGTAAGTATATT TATACAGGGGGTCAAGCACAAGACACTATGCCGGTTTGTACCGTGGTGGT GGGTCATGTGAATTGGATGAAATCACTTAGTAGTACTCAGGTGTAACCGC AAAAAAGGTTGGTCCCTTGCTAACCAATTTTGGTACTAACTGcgtgaaaa atgaaattctgagaggacattttcaaaaaacatcgtattttacaaaaaaa aatttctaggtaggaagttgaatttttttcaaaattttcaaaatgccttt ttttttaatcttaaaaaCGATTTGTAGGTTGTCATAGAAATTTGATTCTA AAATgaattctaaaatatttcaaatgttgtaatttcctattgaaaaatgg aaaattggaaCATTTAAGATATTAGATTTTGTTTTATccgattttattgc tttttggacctacccctgtggaggtcctataaattacctctgttcgtccg tccgttcgttcgtccgttcgttagctaccaacttttctcgagattggctc attagttttttctgattttttgcacaaagatgtgtagttataaaccctcg aatatGACGGAgaccgattttcgaaaaaaaaatttgggggcaaatttggg ccaaaaaacggctaaaaaacgggttttttgggttctaggaaaattgcccc cgagaaaattgccccccggaaaactgcccccggaaaactgccccccggaa aattgccccctaggaaaactgCCCCCTAGNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNggggggcaattttctggggggcaa ttttcctagggggcaattttccggggggccgtTTTCCGgtgggcaatttt ccggggggcaattttctggggggcaattttcctagggggcaattttccgg ggggccgtTTTCCGgtgggcaattttccggggggcagttttccggggggc agttttctcgggggcaattttcctgacaccgttttttggactttgtgaaa tatagGATCATtgtttctttctgattttttgcatggaagtaggtaaaaga tggctcaagcagatttttgttaaaaaagaatttttcagctcaaaaaacgc atttttatctataagaatcactattaataagcatacatcaatgttcttag ccaaattactcaatttttttatgagatagatgttttttttgctcacgaag tcttgaatatgaaagaatatttcaagagcatgaaattttaatagatcgta actatttgtgttctaaatgattgtttaatggtcacgttcatgtagatatc aattatatatgtgttaaatgcataaccaggtaggtccataaaagtatcac ttgtatGATGGTCAAAAAGCCGTTTTGAAGAATGATGTAAATTTGACCCA AAattcagttagtactaactgtacTGAGTGTACAAAtgcatggtttcagc ccacttttcaggtgcccccattgagcatggtgcccccagcaatttagccc cttgagaaattgctttgagttaggtacccccattcagccaaaaaaatttt tttgaattgacactttttgttcttttgtcattcctaaaatctTAATGATA GCGTGGAAAGCGCTCACGCATGAACGCCTGCTAATAagctttgttgttat gctataaagatggcggctgtaaatcagaacaaccacattagaaaaatata gcaaaagatggcgtgatgggaaacgaaagagaaattggatgggaaactag gtgctggggtaaaaaaattcaataattttaaatattttgaaatattcgat ttggaaaatataaccagcccccagagcctccatcaagacagctagatacc cttaatgaataggtaaccccaaagaattgcaaggcattagccccctctac taacctggcctaggtgcccttcagatttctggggggggcTGACACCATGA AATGGTGGTGGTGTTACTAACTTCTTGCGAAAAAGCAGTTAGTAGGCATA GTCTAATttatacccagctggcacacaacgtttatctaacgttatatgga cgtttaGACCGCGTTGTGTGCTACCATGGTTTTATATCTTTTGATTAATA ATTATTAAAGGAAAATTTGTCTATTTGGAGCTTTAAGCGAATGACCCTAG GTATCCACAAATCTCTTCTATGTATTGACTAGTCTCTGCCTGCCAAGCCT TTTTTATACTTCCCTTACCGCACTTcttattaattttttctctcttcaCT CAGGCAACACATTATGGAGAAAAAGTTCAGTTCGTAAAGCCATGAAACAG TGGGAAGAAAAGACATGCGTTCGATTTGTTGAAAGAACTGACCAAAAAGA CTACGTTGAATTCTTCGCTGATTTTGGAAAGTAAGCACGAATTTTTGTCT TAACAGTACATACTTTCTTGCAAATAAAAACTACGCTGACTTTTTTAgca aagttattttataaatctaaaacaGCACTCCCGAACATTGACATTTGTTG GTAGATTGgtccattccattttatatccatgcaGGGGGGGGGTGGACAAA CACTTCTATGGAGTAAtcggagaaaaatttccaggaggtgttttttcatt tttccaagggggtaaaaaatttCTAGGGGgtgaaagactgattttagttc atcaACACTCACCTTAATGTATGAGCAGAATTTTCCAAgagtatttttgc aaattttgctttTCTCCAGGGGGTAttgacacattttcaataattttttt tgacttgaaaaggttcgtccaccccctgtatggttttttaatggaacagc ccattatcttagtcttctttattttttgcggtttgtttgattgacgtttt tcatttttaataaaaCCCTAGTCTAgagattaaaggttttatttttacct gtgtttccgtttcatatcggATACATGTTTCATATCAATTATCagggaca gtgtctgcctattgttatattatgctgatataaacaaaaaatgtttttct ttccctctttctgatcaatcttgccCCACATccttgtcaatccaatgtga aaaagcttgtaaattaaaattgatgagtaagggaaacgatatcactctta tttcgaaacaaaacctttaaatcaaaCCAGAAGTATATGTGAATCTCCTT CGGTTCAAGCAACTGAATCAAAATTCCATTTGATTCTTTTCTTCTACTCC AGATGTTATTCATACGTTGGACGAACAGGTGGTAAGCAGAGAATCTCTCT TGGTTTCGGATGCTTTGGTGTTGGAACTGCTATCCATGAAATTGGTAAGA AAAATTCACCACAGAtatcttttaaggtgtttttaaAGCATCAGGTTCAG CTTCTACATGTTTTGAATTTGCTTTCATAAGCCCTGTATTGTCATTCTAC TCTCGCTTGAGTCTGGAATGTACCGAGAAACTTATCTTTTAAGGAGAATA ATTATCTCGCGGAAATTACTTTCGCAAATTTCCCTAAAATATAATTATTT CATCTACTAAATCTAACTACCATTAGCTCCGTAATTTTAAGGATATGTGT CACTTTTATTATCTCCTTTATTTTCAGGACACATGTTAGGAATGTGGCAT GAACAATCAAGACCAGATCGTGATGATTACGTCGAAATCATTTGGGATAA TATCACTGAAGGTATCAACGACTTTTTCTTCCCTTCCTTCCTTATTTCCA TTCTTAACTACCCGTTTGCCTCGAATTCGAAGTAATACGACATTATTATG GCGTTCTATAGCCTGGTATACGTTTGCTATCTCACTTTGAAATAGTACTT GATTCCTCTCTGAGACAGCCTAGAAAAAAGGATCTTTTGGGTTCCccttt gtctgtacacagactcagtatctacggctaatttcaaaattcattaacGT AGAGGGTCCGTTGTAATTGTCTTTTCTCTATTGAGGTTTTTCAAACTGAC TGCTGTGATAGAGTGTTGACGAAGAGGGTAAACGATGaggtgttgctatt tataaatcatacttcatcgcagaggtttcCGCATGGGAAATTTTTTATTA AACAGATAGtgtgcacagagtgtactacgaagcgataaacgctAGATata ctctggtacagagtaggtCCCCCTAGACCGGTTGCAAATTTGcttatttt actttatttttgttaCAGATAATAAACACAACTTCAAGAAATATTCTACT TACACCATCGATTCACGTGGTTCACCATACGATTATGATTCCATTATGCA TTATGAATGGAACGCCTTCTCAAAATTCCCTGGATTAAGGACAACCATTC GATCGAAAAATGGCGCCAAATTTGGACAAAGAAGTCATATCAGTGTTCAA GACGCCATTCAAATAAATCGATATTATGAATGTGATAAGAAACAATAGAT TCGTGAGCTTTTCGAACATAACACTCTTGGGTTAAATTTTGTATGGTTAT ACTCTGCTTGAGAAAGAAAATCCTTTTATAAGTTCAGAAGGTCTTtagtt ttcattttagtttcaGTGACAGGCTTCAATACATTCAATCCAAGCTGTTA AATTGACGTTGCTTTGACATTTTGTGGCGGTTAGGATGAACAATCAACTC TCaactctccctaattcgaacctctattattcgagtctctctgtaattcg aactaaaacattggtccTATCAGCTGGGGAGTGGTATAAATTACtatctc taattcgaaaaaaacTTTGGTACCtttaagttcgaattagagagagtcaa ctgttcATTTTTCGTTCACCTCCGGAAATTATCAAAACTCAAGTTAGGCT AGCGGAGTAAAACATCAAGTGCATGCGTATGACATAGAGATGAATAAATG AGGGGATATTTTTCCATTCAAGTTGTTTGTTCTTCCGATTTCCTGACTTA GCGAGCTTGCTGCTTTTCCTTATGGTGCAACAAATACTATAAATAACTAT CGATcgtattgataaacatcttaaGAGGgt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020465TCONS_00020465Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020465-proteinTCONS_00020465-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000357supercontigsc0000357:24290..30869 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.11 0.06 0.03 0.09 0.42 0.48 0.29 0.31 0.22 0.27 0.17 0.09 49.32 48.13 12.93 25.84 1.04 0.57 188.21 218.14 13.16 9.79 65.07 89.9 52.65 53.26 0.04 0.17 0.13 0.1