XLOC_011704 (gene) - C. hemisphaerica

Overview
NameXLOC_011704
Unique NameXLOC_011704
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000373:44657..53027+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011704 ID=XLOC_011704|Name=XLOC_011704|organism=Clytia hemisphaerica|type=gene|length=8371bp|location=Sequence derived from alignment at sc0000373:44657..53027+ (Clytia hemisphaerica)
ATACTGATAAATAACTCAGATGACAAATAACAACCTCAGCGTTCGAGATC CAAATTCTTCCATATGAAGAGGGCCGCTGGGGCCGCTGACTTGAAAAAGG CAAATTCAAAAGTGGCTTGTGTAATTGCTAGTTGAAACTGGGTTTCCAAG CTGCAATCTATACTTCAAGATATTCTGTTTATGATATAGAAATGAGGCGC TCGTCTATACTGACAAAGCAgaaagaacaaaagaatttccTGAAATTTGA TCTCATGTGGTGCGTTTAAAATAGATTGAATAATGTCCTTTCAGttcttt tgtttgattgtttgattgatttgacATTTCAGGTACAGCCAGATGGTGAT TGGTAAGTAAAATCGAGTaactgaaaaagattttatccaTTTCTATATCT TGGGGCTTAGTATCTCACATTGAAACATCCTTTACGCTCGCTTAAAACGG TAAAATTAATTAAGATTCaggttttttggagaaaaaGTCGTTGCACTGTC AGTCTTCTGCAAAAtgaaaaacccactttcccgtggaaataattgacgtt ttttatttttttctggacCCTTTGGACATAGGTACCCGTCGTTTACCGCA AAAGTTCCAAATTTCGGGGTAATAAAGGGACCAAATGACGTggcagaaat ttgaaaaattttaaactgtgatatctcgagtttgaaaggGAGTTAGAAGG TCGTTGACcactcattggatcgagaattttatgaattttaagatGGGAGA ACAGCaggaaaacagaaaaaatgctcttgaaaattctgaaatatgACGAA CTATAACCCGTCGAAGAGTGCAATTTAACTCTGTGTTTTCAGCACCTTga cgttttgatttttaaaccaTTTTAAGTGTTAATCTTTCGTTTTTCGGCTT ATAAATCCAATTTTCGACCATTTACCATTaaaagggcttatgatgcgttc agcttcACCCGTTTAGGTGGGTGccacgccgggtgacggctatatatata tttttttttccttatatGACAGCTATCTCTAGGAGCATTGTGTGCGTTCA GCAATACTTAACCGACGTTTGTGACGACGTGAACCCTCTAGTATAACCTA AATTAAATTATAGAGATGCttgaaaagatatttattttctaACATCTTTT AAAGTACCTTGTAGGCTCGCATATAGAAATACAAAATTAAGACAATTCAc tctttaatttttcattcccATCTCATTTTCTCTGATTTCAGTTTGTACAA TTCGGTTATCGCTCAAATGTTTGGCTCATCCACCAAAGTAAGTTATTGTT ACTGTTCTCATCAAGAGAAGTTAAGTGTCTCCAACGTTTTTACCTCATGA GACGAATTTTAACAATGTCAATAATTTTGAACTTCTAAATATCGAGGATA CTGTTGTAGTATTATTAATCACTGTTTGATTTTCCAACAGAATCTATCAG ATTCCTCTATACCACACTGTGTAACCAAATTCTAATGTTTTCTTCGTCTT ATTTGTTCGTTCAAGGATGCATTAAAAGAGCTACGGCAAAAGACGGCAGA TTATATGCGGACAAATGAAGACGACTTTCTTCCTTTCACTTCCAACACGA AAACCGGTGACATGCTTAGCACAGGTGAGTTTTCAATGGTTGTTGACTGt tagaaagttttttgaaattactTACCTATCAAAGGTTCCAAtaccaataa aatattttgaagaatcaaactggttcttatttttatatttaaagctttta aaaagGAAACGGTGAAAATCACGATTAAAAGCTTTCGCAACGCTCTCTTT TCGGTACTTCTAAAATAGAGTGCACCACCAGAAACGACAGCCGATTTCAA ACCACTATAAATCTTTTTcgacattttgaataattttgtttttgttacaG AGGAGTATGGGAAGTACTGTGATGACATAGAGAATACTACCACGTGGGGT GGTCAACTAGAGGTATGTTATTTCATTGTAAAGCTCATaccgaggggggg gggctactcGATTTCGAAATGACGGTATGTGCCGcacaaaatctgctttt caaaatcgtacccttacagtgcagttcaatatggctgaacaGGTACCCTT TCATTGCATTTTCTCATGATTTaaccaacccttatagtgcactatatttt tcagctgtaaatctgcgtgaaaaaagaagcttgggaaattttctatttca aagaaaaactgagaaaattatttttgtcagctgtaattgtcagacaatag aaactttttcaaacaaacgagaagtaaaaacctttctttatatcagttat tttgaatttgttttaagaTTCGACTCATTCAGTGctatctcacagaaaca cacccttacagtgcattttgggatgctggaAAACCCGGCACATGACGTaa gccagatcatatgagtgcccccctccCCCTGGGGCTCATATATCTGAGGT TATCTTTTTACTGCTGGCCAGAGTAACTGACATTGCTTCTCAAAGAATCA ATATATTACTTACTAAGCTCGAAAAGGTTTCGAAAAAGAAATGTCCTCCT CTTTACAGATTCGTGCGATATCGAACGTGTATCAACAAAGAGTGGAGATT TATCAAGACAACGCTCCCAGGCTAGTGATCGGTGAAGAACATGTAGCCTC TACTCCTCTTCGATTATCGTAAGTTGCCTTTTTGATGTAAACTCTGATTT TAATTGTCGCCAAAAACCAAAGGCCCCACACTGATAAAGTTTATAAAGCC TCTGACATTGCAATTTAATCTTTGACCTAGAAAGCGTTATGCTTAATATC TGGAATATGCTCAGTCAGAGGCGTAGCCACGGGTTTTCGTTTCGGGGGGT gagattggaaaatttttgacctttttaggGGAAATTTTTGGAGAAGATTT TTCTCGTAACTTATGCGCCGCGGGCGTCAATTACTGCTCTAAGAAATCTC AAGTTGCTTAAAAAAGAGGCATCTGAAGGTAAATGTTAGCGAGAGTAAGA TCACAAAAAGTGCGGAAAACTTAAAATTTCATGTCGCAGAGAGTTTTCTT TGTAAtcttggcgccgcaggcaaaaagcTAACCAGGCGGACCACAGGGAg gcttcttttttatttaagatTTGGAATCCTAAAAGTGAACATATGCTGGG ATTTGTCCACTGTTTTCTATTTATAGTAATAgaaattctgttttttttct ttggttGTTTCCAATAAGAAGAATGACGTAATCTTAACTTGTGCAGAATT CTCTCTTTCACCTTTGCAGGCAACTTGAATGAATGCAACTTGAAATACAT AATTTACTATCGCTATTTATAGAAATTTTCGTAGAATTGACAGTTAGTGT GACAGATGTCGTttgtttttgtcaataatttatATACCCCTTACCTGTTG TTATTTCCTGTCCATTTTTAAGTTCCAGAAAACtaatacaattttttaaa tcgcaAACATCCTCTTGTGAGTAAAAATAATAACCCACGTGATTTtcttt tggacccacgaacccacgaacccacgagatattttgacccacgaacccac gaacccacgagacaTTCTAACCCACGaacacccacgagggcacgaaccca cgaacccacgaacccacgacacgcacgtaacccacgtaatttagcagact ctaaTATAGTACCATGAATGACATTTCTATGAATTTTATCGATATAGAAA ATTTAACTTAACTGGATTAACTGGATTAACTGGATTTATGAATTTCGAAG TCACATCAGAAAATGTCGATCAAATTTCAAACACTTTGTCTTGATAACAC GAAGTAGAAGCATTGTGTAAAGATGATATCGATGCAATGGCTTTTCTCAG TGTTGTTGTTTTGACCTTATCATTATTACTAAAGTTTGCTTCTACAACGG TGTACTCTATCGAACACTGTCAACAAAGGTGCAACTCTGGCTGGAGAAAA CATCGAATCTTTACTACCCGACGCCGAAGTTGCTTTAGCTGGATCCATCA TTAATTACAGTAAATGGTCTCTCATCGAACGTGAATGGGAAATAGAATAC GGAGATGTTGATATCCCTGCAGAGACTGTACACCCTGGGTACGAGGAAGC TTTTGTTACGGAGAAGGATTCGGCTTTCTTCAAGCTTCATCATGGTGTTT CTGGCAAACTGTCATGGGAGGTCAGAACCTTTAATGAATCATACATAATT CATTTTATGTATGATATCCCCTATAATTTGGGGTTCAAGGAGCATAACCA ACTGGCTATTGCTCTCTGCTCATCAAACGACAGCCTTTGCCGGGAATTTT CCCGATCGGATTTGAAATCGAAGACGTACTCTTTCTCCAAACGTCGGCTT TACAGATATACCATCGAAGATGTGTCTGTTTGTAACCAGGATTTATGCGT CTTCGCTAAGATGGGTACTGGACACAAAGCCACAGCCAAAATCAGAGTCT TCNTTTCGCTAAGATGGGTACTGGGCATAAAGCCACCGCCAAAATCAGAT TCCCAGATTCCAAAATCAGTCTTCCCAGCGCGAGAAGAACATGCCGCtac gaaaatgaagaaaaaattgcAACATGATTCCTTTGGAAATCAAGAATATG ATAATTTTTTGGAAGACGAAAAAGATTCGTCCAACCGAACGTCCAGAGCT GCTTATCTCCAATTATATTCATTCTTCATGATTGTTGTTGTCACCCTCGC ATATGTTGGGCTGGTGTAACTTGACGATCTTATCGGATGTTATTTCTAAC CTGAAgaacctttttttcaaatttagcaGACACAAACTTGAACAGTGAAA AATGGCACTTTGAAAAACCTTTGTGACTGATTGAAAACTAGCCATTACAA CAGCATAATGAAAAATATACAGTCAAGCTTGGAAAACAatcttaagtttt ttttaatttctgttATTATGATTTTATTACcaccttttttgaattttatt ttccgAAGTATCGCGCACATTTTTTNTTTTTAAGTTTTGTTTAATTTCTG TTATTATGATTTTATTACcaccttttttgaattttattttccgAAGTATC GCGCACATTTTTTTCTATATCAAAGTTTTGTACTTTTTTCTACGGTAGTT ATTAATGGGAATTGCTGATGATTGGTGATTCTGGTTTTAGATGTAATAGA CAGACCCTTTATACAACCCTTGAAAGACCCTTCATTCTTGAATATAATAT GAATATTTTATGAAAACTAGAAACCCTTGAAAATATATTCCAAGACCCCT CTTAACCATTGACATCCTTGCTATATAGGGCTCTTTGTATAAAAgttaac attttattttgtgTCTATTTCTGAAAATAAACCTTTATGTTTGTTTCAAA TGTTATTCAAAAAAGATGAAATTGACCATTTTCATTCCACGTACAAACAA CCGattgaatttttataaaagtaaGTTTTACTGAAATATGTCGCCTGGCA ACTAAACTGACTTGAAAGAAATATTGACTGGTTTAGTCCCTTTTTCATTT AGTATTCAACTccagtatttttcaaaaatttattgattgatCAAAGTTTC TGTAACTCGTCATTTTCgatgttttttgtaaaagaaaccTCTTTACAATG AAGTTGGCACTGAAAATTGCGTTTTGTGTTACCATTTTCTGCCTAAGTTT CACCTTTTCGCATGTTTTCCAATTAAAACAGTGCAATAATTTTGATGCAG AATTTTCCAAAGTCACTTATGGTCAACGGCTTTTAGGTGAAATTCTCTTG ACTTTGAGTTCACTTTCATTGCGTGGCTGTCTCACTGAATGTATGTACCA TCTTGGATGTCTATCCGTTAATTACATGAGAGAGGATTCTACTTGTGAAA TCTTGGGGAACACCATCCAAAGAAACATTGAAGAACACGTGACCGTCTTA ACCAATCAGACGGGTTGGAATCATTTCGAAACAAATTATGACCGAAAAGC TGTAAGTTATCAATATCATTCATTCACTTTTGAACCTTTAGTGGTCCGAA TTTCAAAACTTGAGCTTTCAAAAGCCTCAATTTGAGCTTTCAAAAGCCTC CATTCGAACGGTGTACTAAAGTCTTTTGTTGGACCTGAATCGAGGTTTTG CAGTTGACTTTTCGTAGATTAAACATCATTATATAAACTCTttattctat tttgttttttagaTTGGGATCACTTGTTCCCGAAGTAATCCATGCCCATC GGATAAACGTTGTGTTGATAATTGTGATGGCTTGGCTTCTTGCGTCCCTC TTACAGTCGGTAAGACATCGGAGTATCCAATAAGCGACCATTCTGAAAAC TAATCTTCCTTCCTTCTCTTCACTATTTAGGCGCCATTGCTTTNGCCATT CTGAAAACTTCTTCCTGCCTTCTCTTCACTATTTAAGCGCCATTGCTTTT TTATCATCTTAAGTGGATTAACTTTTGCGTATACATTTTTCACGAATTGA GAATCTAAAGTTTACGCCTGGCCAAAATCTCGTGAATTGGCTTCTTTTTC ACGCAATTTAATTCTATTGGGGTTATCATGGGCCACAATTCGGATTTTTT ATCTCCACTTTCTAGAAAAAGTTAGATGCCTTCAATAGCtcgtttgaaag atatttttaagtCTTCTCTTTTGCCACTAACTTGATTAACGGAAGTGTTG CAAATGGTATAAGTTTTAAGTCGATTCACACGATGGCTCGAGTTATACCA CAAGTTATACCTCCTGTCACGAATCCTCCAAATATCATTTGGtccaaaaa tcttttctaaacttttgaaatttgcccACTTTTTCTTTGATCATTTTTGA GAACACAAAAATTGTTGTCTGTATTTTAGAAGCGTTGCACAGTCACGTCC AAACCGCAACTAGTTCATCATTTTCGGATACCGCCAGAGGCCCGGCATCT GCTTTCGACGGAAATGAAGGAACTATGTTCCATACCGCCCACCTCATGAC AGGACACTGGGTTAAGGTCCGTTCACATTTTACTTTTGTTCACTTCTCTG GATTTTTTAAAACACCTTAAAAGCTGGAAATTATTATTAGAAGATTTCTG TTGTTTTTATCAATGAGGtgttatcagatagaataaCATCTTACTTTGGC TGTTTCATCGTCTATTCAGAttcattttgttaaaagtgattattggtcgt aaaaatagtttctcaaaatatgaagcGTGGATAAAAATCTATTTATAAGG GTATTTTTTCACTGCATTTAGTCTCAGTTCAGAAaggtttaattttgaaa aatgtttggaATTTACAAATCTATTTCAGTTTACAATCTTCAATTTTCAC TTCAAAGACTATAATCTGAATTCCAATCTACATGGAAGGAATAactaatt taggtgaaaacttGACAGCTAGATTTCTTTCCTAACAAGTgcgttttcaa aaagttttcaccaCTGAAGAATCTATGAAAGTAGCTGATTTCgaatacaa aatttttatttttactgatGGGACATAAATTtccatttgaaaataattaa attatgttcataattttcgagaattcaaaagaatctaATCAAGCATGTGA AAATATGTAATTAATATACGATATGAcaacaaagaaatgaaattattatt acaCACGTATACGTAATATTCCTTCGCTTTCCAAAAGTGAAGAAATTAAC AGTTTTGTGGTGAAGAAAACGAGAGAACGCGTTCAAATATTGTATTCTGt caattttgttcatttttatcTATTCAGGCGGAATTCAACAATCGTGTGTT TATCGACTATGTTGTGTTTGTGAATCGTAACAGCTACCCTACTCTCTCAT ACCGAAGTGATCTAATTGATCTGAAGACCATCCTAACCGTCAACGGGCAG ACGACCATGACATGGTTTGCGAATACAGGGGACATGGGGGAACGCAGAAT CTTTTCATGTATGAGACAGGCTGATGGAATTTACGCTGAGCAACCACAAG TGGTCGGTCACAACGCGTTAAACTTCCAAGAAATTTGGATTTATGGCGCA GTTTTGTGATTCcgtttgatttgatttgttttattacttttatttttcaa gcgagaaaattttttagaaaagtaaaacttcaaataatTCAAAGCGTCAG CCTAGgcttaggtcccaggcaaaaaattAGGCCCCCCTAAagattcatga aatttttgataGCCCCCAAGGCTTTCGACCTTCGacacttttaaaaattt gtttcacGAAAGAAGGTTAAAACAATGTAAATTGTGTTTGCCTCACCAAA AATAAGTCTTATTAATAATTTAAGTTTCATTCAACAATATTAGGAGAAAT TTTGGATATTGTCGCAATTAGGCCTTACGTAAAAGTGTCGTCATTTGAAC AATATTCACTTTGGTTTTAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020869TCONS_00020869Clytia hemisphaericatranscript
TCONS_00020870TCONS_00020870Clytia hemisphaericatranscript
TCONS_00020871TCONS_00020871Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020869-proteinTCONS_00020869-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000373supercontigsc0000373:44657..53027 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.17 2.8 2.68 1.59 4.15 3.79 3.46 3.73 1.98 2.47 1.81 2.93 5.28 6.94 3.26 2.18 2.95 2.88 14.52 11.6 7.87 7.63 4.58 10.3 6.97 11.36 2.29 1.6 0.95 0.74