XLOC_011860 (gene) - C. hemisphaerica

Overview
NameXLOC_011860
Unique NameXLOC_011860
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000379:106198..109997+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011860 ID=XLOC_011860|Name=XLOC_011860|organism=Clytia hemisphaerica|type=gene|length=3800bp|location=Sequence derived from alignment at sc0000379:106198..109997+ (Clytia hemisphaerica)
CGAGTGTAAGGAACTGTACTAGCCAATCATAGGACCATTTTTCGAGTCTG
TCTATATCAATTTGGATGACAAGGGAGTCACATACTGAATCTACCTCTTT
TAAGATCTTTGTATCATTGGCGAAAAGTAGCAGAGTCGATATCACTTTGT
CAGGCAAATCGTTAATGTATATGACAAAAAGTAGAGTGCCCAAGACACTT
CCTTGTGGTATTCCACTTAATACACTATCCACGTTGGATTTTGATTGGTT
TACTTTGACCAACTGCTTCCTTCCACTCAGAAACGATGATATCCAATTTT
TTAATGAACCAACTATGCCATACCCTTCTAACTTCTTGCAAAGCCTACGA
TGAGGCACGGTATCAAATGCCTTAGCGAAATCAAAATAGATGCAGTNCTT
AACTTTTTGCAAAGCCTACGACGAGGCACGGTATCAAATGCCTTAGCGAA
ATCAAAATAGATGCAGTCTACAGCTTTTCCATCTGATATACTTTCGCAGT
ACCGGTCAACATATTTTAATAGTTGGGTAACAGTGGAACGTCTACTGATG
AAGCCGTACTGCTTATCTGTTAGGAGGTTCGTGATATGTTCTCGTAAGAT
CGACTCCATCAGCTTGCCAACCACGTATGTTAAACTAACTAGTCTGTAGT
TGACGGTTATGAAGTTATGCGCCCCTTTGTTCTTAAAGATTAGTGTGACG
TGAGCAACCTTCCAATCCTCAAGTAGTACCCCTTCAGCCAGTGTCTTTTT
TCATAAACCTTGAAAGGGGCTCGGAAATTTCGTCGACAAGttctttcaac
atttttggGTGTATTTCATCAGGACCAAaagatttgtttacatccagatc
cttgatttttttacttACGATATCTTTAGTTATGATGATGTCCACAATAT
TATTTTCTGTTCTTCGTGGAAATTCTTGAAGATCCTCTTCAGGCTTAACG
GTAAAGACACTGCAGGATTGCTTTTGGAGAATGTTTGCTTTCTCGTGGTC
CTCGTGACGCAGCGATGACTTcgcaaaataataaataatagtCACCGCAT
GGTCAGAGATTCATGGACCAGGTTTTGGAACCGTCGCAATTGTTGTGATG
AATCTCGCTTTCGTCTTCAATGTAATTTTTGATCATGGTTTCTCCCTCGT
CTTCAAGTTGCGTCGTATCGATGTCTTCAGGTGACTCGAGAAGTGAAGAA
ACACATGTCACAGCTTTCATTTTACTTCTTACATGCGACCAAAAGACTTT
TGGTTTCGTTTTTACTATAGTGCATATGTTGCGTTCGTATGTTTGATGTG
CTTGTGACATCATCCGATTTACCCTGTTAGGTGATGTAATATAAGTAAAC
CGATTGCGTCTCCTTTCCTCGGGACGTAAAGCTCGGGCCCATTTTCTGTG
CAGTCGATTTTTCGGTTACTTCTCTTTGCAGATCATTTCCCATTGGTATA
GATCCCTTGCTCTTCCAACTCTGACAATCAAATTCTTTCAACGGAACAAA
TTGATTTCTAAGCtctaataatttatttttaaatgattGCCAAATTTCCT
CAACAGTTTTTTCGTATTGAGTAATCCTTCTTGCCATTGATGTGCCACAA
GAGATTGTTTCATTGAAGCATAATCGCCATCGTCATAGACGTATCACTTT
GAGTTACCTTTGCACTCAGTTTAGCAAGCAAAAGTGAAAACCAAAACACT
ATGATCGCTCTTCCCTAGTGGGCTTCGATATTTGATTCTCCTCGCCCGTG
AAAATTAAATCGATCGTAGAGGGGTCATCGGTTCCTCGACAACGTGTTGG
CTCATCCACGTGTTGATGTAGAAAGGAATCACGGATTGCATCCAAAAACT
GCTCTTCTTTACTCTGCTCGGTATGCGGTGTGGTCCAATTTTCCCAGTTA
ATTGTTGGGAAATTGAAATCACCAACCAAACATTTGTGAGAGTATTTCTT
GTCTGCAGCAATAATCTTCTTTGACTTCACAGATTGCAATGATATGTGGT
TTCTCTTTCTGTGCGTGGATTTgtagtttgtttattttcttaggTGTAAG
TTGGTCTGCGTTGGTGTACATAATTTTTATGTCCTTGACAAGATTCTTTT
TCTATTTAGATTTGTTGGACGCTCTGCGATTTGGTAGAGTGTTGAcggtt
tttttgttgtttttttggttttgttgtatttcgttgtttttgtttttttc
ttctttttgttctttttcgttttttttgacCAGTTACATTTACTGGTGTT
GTTGAAGGTTGGTGGCCTTCACCTTCCTGATGCCGAACCCGTTTTTTGAG
GAACCACGGACTCTAAACACTACATCTGTTTTCCCTTTGTTCTTTTCGTT
CAAGTCTTTTGCTTGTGCAACTAAGTCTTTACATTTTTTcctctgatctg
gagtcaggtCTTCCAGACACTCCTTCCCTTTCTACGTGATTTTACCCTTA
AGAGCGGCGAGGTTCCCAAAGATGTTCTCTTTTCTTTCTCGCTACCCAAT
TTGAACAGTATTGGACGAGTCTTCCCTGTGGATTTCGAGCCGAGTCTAAA
TAATTGTTTAATACCTTTGCCCAGAGGTTTTAAATGAGCGTCTTCACATA
CTCTGCATCATGCTTAGGTGCTTAGGTTCTTTATCAGCTGGTTCTGCAGC
CCCGTGGATAATGATGTTTTTCGATCTTCTTATTTGCTCTCTTTGTTCTG
CATCTTCTTCTTCATGTACTTTCTTAACGGCAGTCTTAATACATTCGGTT
GATGGAGCAGTTTCTCTATCAGCAGTTACTGCAGATGCGTACGATTTTGT
GCATTCTTCTTTCATGGTGGAGAAAATTTGTGTACGCAAATCCTCTAGTT
TTTTATCCAGCATATTCTCAACGTACTCACGGTATGAAATGCGGGATCGT
TAGATAGCTGTTTCTTTAAATCTGACAACTCTTCTTTTTGGGACTCTACG
ATCTCATTCTCTGTGATGGTCTCCTTCAGTTTAGCAAGCTCGGCAGCTGT
TTTTAgtgaatatatattttattattgTCAGTAGTTGTCAGATTTAATGA
AACAGCTATCTAACGATCCTGATAAAGATCTTGATAAAGACAAACCGTCG
AAACCGCCGCAACCGCCTCACACAATTCTGTGTTTATTTTGTTCACTTGT
TCCAATTATAATAACCAATTGTTATATAATAACAATAGCAACAACACTGA
ACTCATCCACCGCAACAGGAAGCGCAATATAATTTGGTTCAATCCACCAT
TTagtaaaaatgtttcaacaaaCATTGGTAAATTATTCCTAAAATTGATT
TCGAAGCACTTCACCAGAGCAAACGACCTCTATAAAGTGTTCAACAAAAA
CAATGTCAAAATTAGTTATTCGTGTACTGAAAACGTCCGCACGATTATTG
CAGCACACAACAAGAAGATATTATCGAAAAGAGAATCCACAACTGAGCTT
TGTAATTGCCGAGATAAGAAGTCATGTCCGCTAGACAACAAGTGCCAAAC
CACATCTGTAATTTACAAATGCGAAGTAACTGCCCCAGATCACGAGAAAA
AAGTTTACATTGGTCTCACTGAGAAGGAGTTCAAACAAAGATATAACGGG
CATAAACTATCCATCACCAATGTCAAATACAAAAACAAAACTACCCTTTC
GACGTACGTCTGGagtttaaaagataaaaatgtcTTGCCAAATCTTAAAT
GGTCTATCATGAAACGGGTAAAATCATATTCTAACACTTCGAAAGTTTGC
CGTTTGTGCTTGCAAGAAAAGTTAGAAATTCTTCGCTACGAAAATAAGCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021160TCONS_00021160Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000379supercontigsc0000379:106198..109997 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.48	0.44	0.33	0.28	0.78	0.78	0.57	0.6	0.29	0.47	0.31	0.32	0.32	0.32	0.32	0.34	0.15	0.32	0.17	0.27	0.28	0.46	0.19	0.15	0.33	0.72	0.32	0.14	0.2	0.25