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Sequence
The following sequences are available for this feature:
gene from alignment at sc0000385:79443..90530+ Legend: gene Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011949 ID=XLOC_011949|Name=XLOC_011949|organism=Clytia hemisphaerica|type=gene|length=11088bp|location=Sequence derived from alignment at sc0000385:79443..90530+ (Clytia hemisphaerica)
gcccaccatcaagcataattcaattgtcaatgaaactgatttttgaagcc
ggaactttctatttctttcccCCAGTGAAATGTTTGTGAATATTTTGATA
TTCTATACCAACATATAATTAACAGAGAATAAAACTTAAAATGCCAAAAA
GGAAACAAGAAAGCAGAAAAGTTCGACCTGAAATATTGCCGTCCAAAGAC
GAAAATGAGGTATTGTACCTTTTTTTACTATCTACGATGGCCCCGAGGTT
TCTCCACTTCTAGAAAAAGACAAttcaagaagagaagtaaaaattgaaga
agggaagtaaaaattttaagaagagaagtaatttttttgtattacttcac
tgaaaattttacttttcttcttgatttttttacttctctttcaAGCNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCTCGCC
AATGTAGAAATTTAATCACAATTTCGATACTTAAAGACATTTTACTtccc
tttttaaaatttttacttcccttCTCGAAATATTTACTTCccttgtttaa
atttttacttctcttcttgaaactttcagaactttttttaGAAGTGGAGA
AACCTCGGGGCCATCGTAACTATCCTTTTTCTCCAGTTTGCTATATTAAA
CACCTTACATGATTAATTCCCTTTGTTAATGTTTTTGGAGGAGAATCGaa
tgaatctaaaaaaaaagcAATGTGGAGATGGAATTTCTCCCAATTCATTC
CCTCTGTGCAGTCAGTAAACAAGAATTTACTTCACTGAGTGGCGATTGAG
TCTTCTGGTTCCACATGGACCCAtagctcaatggtagagcaaatgcccgc
aaatggcatggttgtgagtttgaGTCTCACCAGAACCGTTGGTTTTCCAG
TGGTTCTGGTGGCTAGTTAGAAGACAATATGAGAGTGACTGTATTcactt
tattgaaaaaaaagtttttctcgtTATTGCTCTATCTAAATTTTCATGTa
gcttttattattttcttctttgtaTTTTATTCACAGTTTCTATTGGACAA
GTTGCAGAATGAAGAAGATGATATGAGTGACAGTGACGAGAGTGTTTATT
CAGGTTTGGAAGAAGAAGCGGACACTGATTCTGAAGAAGGAGATGAAGTC
AAAGAAATCAATAGtgaaggagaagaagaaaatgaagaatcgACTGATGC
TGATGACGAGGTATATCATGTAACACTGATTCTCAAATAAGATTTTAGCC
TTATATCTTAATCTTCAGTCTTCAAATCCTCGAAAGAGAATTTATAATCA
AGGCATTGTGACTTGCCATGACACTCAAAAGGTTTAGCCTTGCGCTagca
tcgctctcccagtgtTTTCCGggtgtcatggtatacgccatggcttggca
gctccCGTCTATCAAGTTGCAGTGTCTGTAAGCGCCGTGATTATTATttt
taggacccattccgaATGTATATCTCATCTTTACATGCTTTTTAGGATGA
CTCagaagaagaggaagaagaagaagaagaagaagaatcaaGCGATGAAG
ATGAGcttcaaatcaaacaaactaAATCATCCTCTGATACGAATGAAGAT
CATGCTGAAAATGAGAAAGGTGGTGATGTTGTGAAAGAGGTCCGCAAGAA
AGCAGTGTTTGAAGATGTTGACACGTCTGACGAAGAGGTTTGAATATAAC
TTTGTCTGTAATCGCTTTAATGAGATAAAGTCTCACGATATGAAATTTTA
CAAATCAAGTTTAGTTGCTACGGGAGTTCCAAAAGGCCTCATTTGccaaa
tattcaaaattcaGTCAGCATGGACATTTTTACAGTAAAAAGGCACAACA
ATTGTGAAAATATCATAGCTGAGCCAAAAGTGCCATTCGTGAAATCAAGC
AAGGACCAAGCAAATCTTAGATGATGATCTCGACTGTGATTTTATCTcat
tattgaagtattttttaGACTCATCTTTAAAGTAggtctgaaattatttt
taaagtatCATGGCCTCAGTTATTGCTTCGTCATATTTCATTTTAAGTTT
CCATATTTCATATACTTTATTACATTAATGAAGCATAACTCTGtagattt
aatttaattttaatgcACTAttaattcatcattttttaccCTCCCACAGG
ACATTCGAAACACGGTTGGTAACATCCCTATGGAGTGGTACAAAGACTAT
TTGCACATCGGTTATGATCTCGATGGGAATAAAATCGGTAAAAAAGAACA
AGGCGATCAATTGGATAACTTTCTCACCAAAATGGAAGATCCTGATTATT
GGAGGACAGTTCGTGATAAAGTCAACATGGAAGACATCAAACTGACTGAT
GAAGAGATCGAGATCATTCAAAGGATTGAAGGAGGACAATATGCTGATAA
AGATTTTGATCCTTATGAACCTTACGTTGATCATTTCACCAGTGAAACTA
TGATTCATCCCATCAAAGATAACCCGTCAACTAAGAGGAGTTTCACACCT
TCCATTTGGGAACATAAAAAGGTAATATCAAGTGTTTTGATAGCTCAACT
GTTACATGAACCATTaagaagaaaacaaatattACATCTGAATTATGAAA
CTTGGAGTTCTACAAAAATGAAATAgttgttttctttttgatgaTCAAAA
ATAGGCTACTAATGTCTAATGTATTCAGAACACTGAGGATTTTAATTACG
AAAAATAACGGAAAGTAGATTATCTTAAATAGATTTTCTTCACATTGCAA
ATATTTTCTTGACTAATATTTTCATTGTCAGGTCATGAAAATCGTGAGAG
CGATTCGTAACGGTTGGATAAAACCGAAAGTGAAGTCGGATGGACAACCC
AAATATTATTTGATATGGGGAAAAGATGACAGGGTAAGCTGTAATTGTAT
ATATACTGTAGAGTCTCTCAAAATGTCTTCTTAATAACTCGAACAAAGTC
GTGTTCCCCGTGTGTGTTCGTTCGAGATATAGTGACTCAACTGCATAACG
TGCGTTggaaaaaaagctaaaacacAGGGAAATTCTAGGCTAGATGCTAC
TTTATTTTCTATCGGAATGTTTGGTTTGTTTTCGTTTTATTTACTTGTAT
CGTTGTTAAAACATTTGACTTCCCCAGGTTCCAAATACACAAAAAAATGA
GCCCCTCTCTTTCGTTAGTGTGATTTATTGTACACTATACATTATTGTTT
CGTACAAGAAAATTTATGTTTTCACTTTTCAGCCAAATGATCATCCGATG
AGATGGGCCGCTCCAAAGCTAAAACTTCCTGGTAAAATTAAAGAACATCA
TTGCCTTTAGTGTCATACTTTTGATACGAATGTAGATTATaatttaaata
acattttaatggtcattctgtatatatttttcgaCCTGCTTGGTACAGGT
CTTCGTCAGGTCTAAACAATACAAACGGTTGAAGGCGCTACCTTgacttt
ttttgacgtcaaaaaagtcaatgtagtgtcttctccCTAATGTGCGAGAG
CATTGGCTTCCAAAACCTAGATGTCCCATACTGACCATCGTCTAAATTAA
GACCATGGTCACTATGTGGCGCCGTCTGACGGAATTGGATTTCCAATGCT
TCTCGCACTTTTCTATCAAATTTGTTCTCTTCAGTCTTTAAAGAACATCA
TTTAATGGGGTCacaaaattagagaaattttgtGTCCCTCCTTTCTATAC
TAAAAGCAAGAATACCTTTCATTTTACTATTCTTTCGAAATGTGATATTA
GAAATGTGCTCCacataaaatgacaaaaagtgcgcaaaacaattttcttg
ttttaaagTATAGAATTTGATTTATGCAGGACACGAAGAATCTTATAACC
CTCCACCAGAATATCTTCCCACTGAAGAAGAGGTAACTACTTAAAAAGTA
TTATTTAAGGAGCCTTTCCCGGTCAAGTTAATATAATTTGGACAACATTT
ATTCATTCTCCTTTCAATCTCATATTGCAGAAAGCAGCATGGGAAGCGTT
GGATCCCGAGGATCGGCCACAAAATTATTTGTCACAGAAATTCGATGCTC
TACGGAAAGTTCCCGGATATTCCAATTTCATTCAAGAGCGTTTCGAGCGT
TGTTTGGACTTGTATCTTTGTCCTCGTCAAAGGAAAGTCAGAGTAAGGAT
GAACGTTGTTTATCGAATTGTGGGATGGAAGCCGTCAACTGATTTCCACC
TGtgaaaatattgtatttttggTGATGTAATGGGtcattccattaaattt
ccatacagggggttggACACAtcttggaaatgtgtggatactGCCTGGAA
AATGGCAAGAACGGCAAAAAAcccttggaaaatttcttttcagacTTTGA
AATGAAAGTGGACGAACTTAATCAGTCTTTTAAgccctggaaattttaaa
ataaatttttcaccccctgaaaaaatgaaaaaacactctttgacaccccc
tggaaattctgctCAAATTACCCCCTGAATGTTTGTTCACCCcctctgta
tggatataaaatggaatggccgaatattttgcaaaaagaaattttcgtaG
TTGATTATTTTATCAGTCAAGCACAAACTAATCAACACTTTTCTTCATAG
TTGAACATCAATCCGGAAGACTTGATTCCCAAACTACCAAGACCTAAAGA
CCTTCAACCTTTCCCAACCACTGAGGGAGTAGTAAGTCAATAGCTTATTT
GATTCCCAAACTACCGAGACCTAAAGACCTTCAACCTTTCCCAACCACTG
AGGGAGTAGTAAGTCAATAGCTTATTTTATTTCCAAACTACCGAGACCTA
AAGAACTTCAACCTTTCCCAACCACTGAGGGAGTAGTAAGTCAATAGCTT
ATTTGATTCCCAAACTACCGAGACCTAAAGACCTTCAACCTTTCCCAACC
ACTGAGGGAGTAGTAAGTCAATAGGTTATTTGATTCCCAAACTACCGAGA
CCTAAAGACCTTCAACCTTTCCCAACCACTGAGGGAGTAGTAAGTCAATA
GGTTATTTGATTCCCAAACTACCGAAACCTAAAAACCTTCAACCTTTCCC
AAGCACTGAGGGAGTAGTAAGTCAATAGCTTTTGATTTATGGTTAACTCC
CTCTAATTTGAAcctcttttattcgaatcaTTCTGTAAATCGAACTATCT
catcccctcagctggaaagtgaTACAAAATATACTCTCCGTAATCCGAAT
CTTTGTTCATTtctctttcttcttttagaGGTACAAAGGTCACACAGACG
TCGTGAGATGTATATCAGTCGATCCAACCGGTCAATGGTTAGCTTCAGGT
AAAATGTATTTTGGTGCCAAGGTTGTTAATCCTCATTGAAGAATACATTA
AACATCTTTCCATGCAATGTTTTTAAGGAATGTTATACTTAGTCTTCAAT
AAAAATgttaactattttcaaaagaatggaatctattgtttatatttttt
gggGGATTTTTCATGGGGACACCTATTATGTCGTGAAATCTTAGATATCG
AACGGGTCCTTGTTTTACAcgccttttttcttttttatgtgTATAGTTAG
GCTGTGTTTATATCCAGAAGAATTCAGTTTACATTCAATATTTCACATGG
ACGGGTCTGTAACACATGTTactcaaaaatgttttcaactttgtaaaata
ttaaaaataccgtatcatgctttatttttctgataaactCAATCTCAATT
CTTGTTTTTTCTGTAGGAAGTTCTGACAATACCATACGTTTCTGGGAGGT
GATTACAGGACGTTGTATGAAGACTTTGAACGTTGAGGGAACAGTGAACA
GTTTGGAATGGAATCCACAAGACACTATACCCATTCTTGTAGCTGCCGTG
TAAGTTTAATATTGCATTGAACCCCATTCATACTTAACACCTCAAAAACT
TGAGTGGTGAAAACGCTCGGCAGATTAAAATTATCAGTGCACGAAACTCT
TCCGTCTCCATGAGGTACAAAAAGAAGCTCTTCCGTCtcagaattaaaaa
ttttactaaatttgaagaattgaatTTTACCTAATTTACTGTTTAAAAAA
ATCCGTTACCATCTGAGACAAGAAACTTTGCTTTGACCCCTAAATGATAC
TCTCTTTCAGTGATACAGATATGTTTATAATCAATCCTGGATTGGGTGAT
AAATTGTtatgcaaaaatattgataaCAAAATGAACACAACGAGTGAAGA
TTTCCAACAAAGCGAACTTGCAACGTGGTCAAAATGCAATAAGAAAGACA
ATGAACTTGGTTTCCGGTTAAAGATCTCACACTCGAAGGTGACTTTATTA
TTGTAGTATTAGAGGAGAATTTTTGTTTCTTGATCGTATTGTTCATTGAC
GCAGTTACCCCGAGCAAATATACTATCTTTATCAACAGTTCTTCGTTACG
TTTTAACTCGACGATTAATGCAACCTATTTCTCAATTTCTCAGCCAGTCA
AACAAGTTACTTGGCACGGTAAAGGAGACTACATTGCTGCTGTGATTCCA
GACGGTATGTGATTTACCTGTCAGTACTCAAAATGGTGCATCcttcaata
tttcattttaccAGGTACTCTTTGTTGAAATGACTAAAAATTGTGCTTCT
CTAATCCATAGGTGAAAGCAAGTCAGTGGCCATTCATCAATTATCAAAAG
GAAAATCACAGGTATTTTGTACTTTTGGCCGTGTAATAAATACACTTCTC
GTGCATTAATTTGTATTAATTTTCCTTTTGCTCAAGATAGCCTGATTTTA
ATATTTAGTAACCTAGAAagtgttttaaaaagttttcctacatagtaggg
ggccaagcctggggccccgtgacatcttttctacgacctggccattttta
gtctattccaaaaaacagtatattacaagatatttttgagagggaggacg
cggactagacccgggaaaactttttatgaccaaaatagtgacgccatagg
caaaactgcaagggaaaataaggggtaggaaaatagctgattttcgaaag
tcaaaataaacgaaaatgattggtaccatcagAAAGAACATGAAAacctg
agcaaaaaaaatgtattacaacaactctctgactaaaacacacaaagaaa
tacagccgcttgaagttaaaaaacataccgacgtcagtacgatcaagaca
agatttgacgtcaaatcacagtagagctgacagttagttggtcttaaagc
agtgctgacgagtcctaataaggacgaaatgcatatgctgctctgccacc
caaatctcctgagtgaatatagttggacagaaattcgtatttcttcacat
atataccCATCTAAAGTTTCATTCGACTTCTTATTACCCTAGACTACGTC
GTATCTCCTTTCGTTTGGAGCGTAAAACTGGCCTTTAGCCTGGAACTTTC
TATAGCGTAGACTGTAAACTCAATTGGAGAGTTTTTAACAGGAAAACGGC
CATCATCACTTGATTTCATTTGatcattttactttttctacAGTGTCCAT
TCAAGAAATCTAAAGGACAAATCCAATGCGTCCGATTTCATCCCACAAGA
CCTTTCTTCTTTGTCGCTGTAAGTTTACATATTTgtcaagaaaaaaatga
ctctTAATTCACATTTCCTCTTCAATAAAtactcaaaatatttctttgaa
aatttccagCTAATGTCTTGATTAATAACTTTGGGTAACATCCAGAGGgt
tctttgattatttttctcTAACTACCTTATCGGAATTTTCAGTCCTTTAA
TTGGCATTATTTTATCCCTGCCAAAAGAACAATACGAACAATGCGGAACC
CGTTACACTTCTTATTTACAGACGCAGCGATACATCCGTGTATACAACCT
TCAGAAACAAGAATTAACAAAGAAATTAGTATCAGGAATCAAATGGATTT
CGTGTCTCGATATACATCCTACAGGTAACTTTCAATCCTGTAAAAGCAGG
GCTGAAGTCTTTGATAAGTCAATTTATTCTCTAACTTTGTCAAAACCTCT
GAACCATTAAAAGCACACATTTTGTTAATCTGCTGACTAAATGACATCCA
CGCAGAGgctatttagaaaaaaaagaccTTTTTAAATTTACAAGCATTAG
ATCGAAAGCCATGAAATTTCATGCCATATTACCTTTCCTATGACACCCCA
Ctggaaaataaagcaaaaatttcgtccccggtgggaaaatatccttgaat
ttcagccctactggggaattgactttgatttcagccctactggggaattg
actttgatttcacccTTTCACCCCCACTCgaaatttcatgtttaaaaatt
gcactccaaaaccttggaacaatagaatttctataccCATTGGGATTTCT
actcaataggaatttttatccccactgaggaaaaaaagctccaccggggc
tgtgagatacGCCTACTGTTTCCATCTCATATTTGGTTTGGGAGATATGC
tgcacatttttttttctttttttctattgttgatatttttttgcacaCGG
TACAAGAGACTTAAAtgtctcttctgattggctaattggctaattaaaaa
agaacaacagGGACGATTGGGCCTTTGAAGGCTTAATTTTATGCAATTCA
TGTAAAGGCCTGTTTCCCTTTTATTTTCAGGATGTTGTATCTTCTTAATC
TTTCTTCTTCAACGACAAGTTTTTCGTTTTATTTTCGTTAAGAGTGGGCC
ACATCCCCTTTAAGTATTACTCACCCAAAAGTCTGGAAGTCTCGGCTCAG
TCAACCTACCAGTATTGATTCGAACCATGTTCATGAGGTAAGGTCATTTT
TCTAACTATACACAGTAGTAGCTCTACATAACATAAGATTTTCTATTCGA
TTACAGGCGACAATCTTATCATTGGAGGTTATGATAAACGATTATGCTGG
TTCGACATGGATCTCTCTACTAAACCTTACAAAACTCTAAGGTACCTGtc
ttttcattgttattttttgaACGCAATGACGTTAAGTCTGAATACCCCTC
CAGTTTCTGAAAATGTTCATTTAATCTTATAAACTGTGACTAAtcataat
tgataattttcacCATATGGTAATAAAATCCTGTACTTCCTACAAACGGA
TACTACATTGAGATATTTCTGAATATTTTcatgtaaattttattttcaag
acaTCACAAGCGAGCGATTCGACAAGTGACATATCATAAACAATATCCTC
TCTTCGCCTCTTCATCTGAcgacggcactgtcatcattagCCATGGAAAA
GTATTCAGGTAACATTAGCCTACTTGCTGTTGTATTTTTTTATGATCATC
ACGTATTTTGTGGAATatctttttcatgatttttagaatCCATACTAAAA
GGATTTCACAATGGCCAGAATTTTAGGTCTATGCTTCCTGTTCTAGTTTA
GGGTCGTTATATATTTATATATCACCTGAGATATATGATAGTATGCTGAA
TAAAATTCAGTCAATTCTTTCCTCATTTTTATAGCGATTTGATGCAGAAC
CCTTTGATCGTACCATTGAAAATTTTACGGGGCCATCAAGTCACCAATGA
TCTAGGTAGGTTCCTTAAAGAATTGTAATACATTATACTGTCCAGATTCT
GATACTTATAGTTTAGTTTTAATCAAACAAACCTAATATTTGATATTAAT
ATTAAAGACTTGGGAATAGATTTTCAATGTTACGTAACCTTACAAGTCCT
GTAAGTGAAAGCTCAATACAAGTTTTAACCATTGACTTCCAAACCCGAAG
Ggttagactcgagactcctggatggaaaatgaagccacttgtttcccatc
cagaacgcccacgcgtagtttttacacaagcGCTGGATTTTAAATTAATA
tcgcaagatttaaaaaaatgctgtcttcaaaaacaaagaaatcgctaGAT
Acgatccgtcgtcatgattgcggcgcgttttaggtgcgttctggatggga
aataagtggcttcactttttcttgcctgggaaaggttagagattctactc
tagcccttcgtgCTTTAAACGCAATGGTTTTAACCATGAAAATTGATGGC
ACAAACGTTTCATATGGTCATCACACCatcagaattttgaattttgaaat
gatgTTCTAGAAACTGCCACGAAAATTTAGGGAATGAACTTTTGGGAATT
TATCATAATTACCTGAAAGACGGTTACAtaatatttaaaacatttttctc
attttttcaacGAAATCTGAACAATGATagacaaaattttgaatctGATA
GAAATTTGGACAGAAGCAAAAGTCGGCCTTAAAAAaggagatgccttgga
gtttttacaagatacttcactagttggtcatttaaagtgatagagatgac
gcgttctttagaaaaagtaataagattcttttattacatcttaacgacca
accaaatcaaataagagcttgtaaaaactccagcttgtcccttaAAAAAG
TGGAAATCTGTGGAATtgatacaattttcaaaataaattttcggaGCTTG
AAAAAGGGACTCTGACCAGCTTTATGTACCTGTACCTCAACTAAACTTCT
CAATCATTTTTCAGGCGTTGTTGATTGCCAGTTCCATCCACATCAACCGT
GGGTGTTCTCAGCCGGTGCCGATAAAACCATACGGCTGTTCACTTGAGTG
GCTTTTGTACTTTTTATAGGTTTTTTTTCCGTTGGAAGATATTTTGTATC
TAAATTCAATAAGACATTGTGTATTTTATCTTTTGTCTGTTGCAGAGAAT
TGCTTCATTGTCATAAATCTTGTAATCtttaaatggag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000385 | supercontig | sc0000385:79443..90530 + |
Orthologs
The following orthologs are found for this feature:
| Ortholog Name | Description | Organism |
|---|
| BOP1 | ribosome biogenesis protein BOP1 | Homo Sapiens |
|
