XLOC_012521 (gene) - C. hemisphaerica

Overview
NameXLOC_012521
Unique NameXLOC_012521
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000411:106340..116418-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012521 ID=XLOC_012521|Name=XLOC_012521|organism=Clytia hemisphaerica|type=gene|length=10079bp|location=Sequence derived from alignment at sc0000411:106340..116418- (Clytia hemisphaerica)
ATGTAAGACATACATGAGTACTAAAAGGATTTTCACTAATTTTTGACATA
CCCCCACCTATTTTTCGAAAATGTTATTTTAGTATACATGTACTAAAATT
ATTTTGAGCAATTTAACATAGATACCACCCATATTTTGCCTTTTTACGGA
TAGTAGGCACAATGCCCCAAGATTACCACTGATCCTTTAAGCTCTTATTT
TCTTAGATTCCATTTTAAAACTTGTTTATCAGTTTTAAAAAAGAAAAATA
TCTATGTTTTAAAAAGATTTGGAAAAGTAAAAAAGATGAGTTATAACAGC
AAAACAAAGCATTTGAGGTAAGTCCTTGTCCATACTCTTAATCAATTTGA
AGCAAAGCTTTACTGTCACAAGGTAATACTTCAAGCTTTTGCAAATTGAG
TCTTTTACAATTTAAACAAGAAAGTTTTTGAAATAGATTTTTGGAATCAT
AGTATAAACTTCTAATATCGTTTTGCTTTTTATTTTTAGTACCTTAAGGG
GATTAATTTTCGCGGGGAGTTTTTCCGAAATTTGCGAAAATTAATTCTCG
CAAAAATTTTAAAAACCTTTGGATTCTCAAAATTCGCAAAATATAATTCT
CCCGAAAAATTTAACATCATAATTTTTGCCTAAATCCCTAGGAAAATGAA
AGAAATTCAATCAAAAAGGGGCTGATTCGCGAAATTTTATCCTCGCGAAA
ATTTTCATTTTCTGTGCTCGCGAAAATAAGTTCCCATGAGAATTAATCCC
CTTAAGGTATCAAATAATCTTAAAAAGATCAATACTTTTTCTTTTATATT
AAAGCAAGTTTTTATAGAAGATGGTAGTTTTAAAAAATCTTTTTAATTTT
ATGATACATTAAAAAGGTTTGCATGCCTTAAATATACAGTATGTATGATA
GTCTTACAGCGACGGTCATCAGCCAATGTCAGACTGAAAAAGCCTTTTGA
GTGACTGAAAACCTTTTGTATTTTATTGGTCGTGATGTCCGGATGAAAAG
AAGAATAAAAACATTAACTTGATTTGGGAACAAATCTTCTATAAGTCCTG
CCTCTTACTCTATTCTTTTTCTAATTGCCTCTTGTGACTTGTGTTTCTAC
GATTACTTTTATCAAATCGCTTTCTTCATAACTTTTAAGAGTTTTTTCAA
GTTCACTTTTTATTGAATCACTTTCTTTGTAACTTCTAAGAGTGTTTCTA
AGTTCACTTTTTATTAAATCACATTCTTTGTAACTTTTAAGAGTTTTTCA
AAGATCAGTTTTATCAAATTGCTTTCTTCGTAACCTTTATGATTTTCTCA
GATCACTTTATCAAATTGCTTTCTTCTTAACTTTTAAGAGTGTTTCTACT
TTTTTTTCTTACTGAGGTTAGTAAATATATCCTGTTAGTTGAAAAATTAT
GATAATTTTAGAAAAAATAAGACTGAATGACCGAGAGGATTTTGAGTTTG
ACCAATTGGATTTTATTTTAGTCAGACATCATGTCCGAGTGACTAGAAAT
ATTTATTTACAGTACTGGTCTTATATCACATTGTCATATTTTGTTTAGAT
TGTTGGAAGACAAGTTAAAAGGGAAGGTTGCATCTCTTACAAAAGCTGAT
GAAAATCATGAGTTACATTTCAAGAGAACGCTTGGTGATGAAAAGAGTAA
ACATGTTGTGAAAGTAAGCAACTAACCTCATCCCTTTTAGAAGTTTCGTG
TCCTTTTCAGGTTTCATCGTCATGAAATAATGAACCATTGTTCACTTCTT
TGAGAGTTTTGGTTGGGAGTACATTCCACTTGCTTAAAGTTATTATTGTT
ATAAATGAAATGTCTTTTTGGGTGTCTTCTAATTAAATTGGAATATTTTG
ACAGCATTTACAATAATGATGACATTCAAAAACCATTTTGAAATTCGAAA
ATTTTTCCTGAAACCTATGGGAAAATGAAATAGTTTGACAGTTTCACTAA
TGAATAAAAAATACAACAAAAATTTTTTTTCTAGCTTGAAGCAGCACTAG
GAAGTCTTATAAAAAATGTGGAAAAACTTGCTGAACTTTATCAGAAGAAT
GATGATCCATTAAGATCTGGTAAGGGATAGCAGATACAATTGTATTTCTC
ATAAAAAGAAAAAGGCACTGAAATTCAAAATGCAAATGAGATGATATAGG
ACTGTGGTTAACTTTTTTAATTCCTATTTTGTGGTGATTTATAGCTGCAT
TATTTTGTAGGGATGTTAAGAGTAAACAACCTTGAAACTTATATATTTAA
ATTTTCTAGACAAAAGTCATCCTTTTCTTTATAAACAACAAATTGATGAA
GTTCAGCTCGAAGAAGAGTCCTTCACTAACTCATTGGCTCTTTACACAAA
AAAACAGTTCTTTGAGGTAAGATTGTACATATTTCTTTTATTCGATTATA
TCATTCAGATACTGACCAGATTCTACTTGGTGCTGCTTGGTGTTATAAAA
ATAGTACATGGAGAAAACTAGAAATGTTTTAAAAATCCAGACATTGTCCA
GCATTTGATAAAAACATAAAACTTAACTTCAATCTTGAGCTATCATGCTT
CATATTTGGCTAAGTAGCTGAAAAGGTTATAGCAGAAAAAATATCTTGAT
CAATGTTTTTTTGTTCTTCTTTTGCACAACATCTTTCAAACCAATAAAAT
GAACTCACATTATGATAGCTCAAAATTTCCTTAATCTAATTCATGTTAAA
AGTTTTCGAAAATTATAACATAATTTCTAGTATGTTAAAGTTGAAAATTA
TAACATTGTCAACAAGAGTCAATTCAATTTGTACTTTAATCAGATTAAAT
TTTGCCAGATTAAATTTTGCAAGCGAAGAAAATTGTGAAAACAGCTGAAA
AATAGCCATTTTGTGCTACAAATGAAGACTTTGAACTGGTTTTCCGCCAA
AAATGCGATTAAAAAAATTTTGTGGGTCGGGAATCTCACGCGTTTTCGCG
AGTTTTAATTTCACGAAAATGGCAAAAATTCGCGAAACTGTGAAATTTAA
TCTCCCAAAAGTTAATCCGATTAAAGTACACTGTTTGAAAAACTCAAATC
AATTTTTTTTGTTTTTCTCCAAAAACTAGGCTTAAAGCGTAAGAAATCGA
TTACAATTTTTATCAAAACATATTGCCCTTGATTTTAGGGAATAGCAGAA
TTGGCAGGTTCTAAAGACCAGACAAAGTATGATTTTTTGGATACTAGCAA
ACCAGAAACTCTACTGTTCAAAGGTAATGCGATGGTATATAGGAACTTGT
GAGATAAGATGAAATATATTTAATGGACATTAAGTCAATGCAAGACATTG
TCAAATGAACTTGACCGAAGCAAAGTTAATTTTTATTGTTAAACATGTTT
TGATATATTAATATCATCGTCAGTAATTAATTTAGTGTTTTAAAAATAGA
TAAAGATTAGTTTTAATGCATATTATACTTCTTTACTGCTATAACCTATT
ATTTTTCTTTGCCTTGAATGAAGTTATTCATATTTTGTAGGAGAAAGAGA
TGAGATAAAAGCAAAAGATAAACAAGAGTTAAAGAGACTTCAAATACAGT
AATGTATTTTTATGCATCAAATTTCTCAGTTATTGCTGGTTCTTTATGAA
AATTATAATCTTCTCCAAAATACAAAAAAAAATAACTTTTTGCAAAATAT
TCCAGGAAATTAAGCTTCTTATAATAGGTAATTGTCTTGTATATGTATTG
TATTTTATGATCAAGTAAGGGGTTTGTTTTTAGGTATCAAGAAAGTGAAA
TCAAGCGGCTCAAAAGTGAAATGACTTTGGAGAACTTGAAGCGAAAAATC
AAGATTGCAGAGTCCCAAGTAAAATCACTTAATTTGGGATATTCGACTGT
TGACGCAGACATTAACAAGTAAGAACTCTACCCTTCTATTAAACATTTTA
TTTGAAATTTTCAGAGAGATTTGTTTTGATATTTTCGCACAAGCTTTTAA
ATAAGTTTATTGGCAGGGAAATAATCTTTGATAAATCGTACATTATTTTT
GTCTTTTTATACATATACCAGGAACACAAAGTTGACTGTAATGAATGAAA
AGAGTAGAAAAGCATTGCAAGATGATTTGGATGAACAAATGATACCTTTA
TTGAATGAACTTCAGCAGTTACATGGCATCAAAGTGTTGGAAGGAAATTA
TGATTTAAAGATTTTTCGTCAAGATTATTTTCTTTCCAAGCAAAGTGAGG
TAATCCATGGATTAGTTTGCAGCATCTTTTTCGATTAAAACCACTACATT
TTTGAACCACAAAGGAGAAAAGTGTCACAATCAAAAGTAAACAATTGTTT
TGTAATTCTTTCAAATTCTGCTGTCAAAGTTGGTCGAAGAAGACCTCGGT
TGGTCAAGAGAAATATGCTGTTAACTTGTTCTGTTTACTTTTAGGTCATA
AATCAGCTTTTGTTACAATGTTCCAGAAATTATTTCCTTACAATGATGTA
CGAGATTGAATTGAAAGAACATCGTAAAATTTATCATTTGATCGAATCTT
CAAGAACATTGTTAGCATCAGAAATAAAGAAAATCTCCTCTAGAATTGTA
TCCTTTTCACCATTTATTGATCTTCAAAATGTAAATGCTTTTCATGTTGT
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTCCATTATTTTGTTGAATTTCGATTTTTTTT
GGTATTTCTTTAGTTTTCGCCATTTTGATGCATTTCGACGAGCACAACCA
GCCAGAAAAAAATTTGACGTCAAAATGACGTCTTGTATATGTATTGTATT
TTATGATCAAGTAAGGGGTTTGTTTTTAGGTATCAAGAAAGTGAAATCAA
GCGGCTCCAAAGTGAAATGACTTTGGAGAACTTGAAGCGAAAAATCAAGA
TTGCAGAGTCCCAAGTAAAATCACTTAATTTGGGATATTCGACTGTTGAC
GCAGACATTAACAAGTAAGAACTCTACCCTTCTATTAAACATTTTATTTG
AAATTTTCAGAGAGATTTGTTTTGATAGTTTCGCACAAGCTTTTAAATAA
GTTTATTGGCAGAGAAATAATCTTTGATAAATATATTGTACATATTTCTT
GCTCTTCTCCTTGAACTTCACCCCTCTATCATTATTTAATTGTCATTATT
AATTATTTTTACCAACCTTACCCTCTATATTATTGTTAGAAGATGTGCTA
TTTTTTGTCTTTTTATATACCAGGAACAAAAAGTTGACTGTAATGAATGA
AAAGAGTAGAAAAGCATTGCAAGATGATTTGGATGAACAAATGATACCTT
TATTGAATGAACTTCAGCAGTTACATGGCATCAAAGTGTTGGAAGGAAAT
TATGATTTAAAGATTTTTCGTCAAGATTATTTTCTTTCCAAGCAAAGTGA
GGTAATCCATGGATTAGTTTGCAGCATCTTTTTCGATTAAAACCACTACA
TTTTTGAACCACAAAGGAGAAAAGTGTCACAATCAAAAGTAAACAATTGT
TTTGTAATTCTTTCAAATTCTGCTGTCAAAGTTGGTCGAAGAAGACCTCG
GTTGGTCAAGAGAAATATGCTGTTAACTTGTTCTGTTTACTTTTAGGTCA
TAAATCAGCTTTTGTTACAATGTTCCAGGAATTATTTCCTTACAATGATG
TACGAGATTGAATTGAAAGAACATCGTAAAATTTATCATTTGTTCGAATC
TTCAAGAACATTGTTAGCATCAGAAATAAAGAAAATCTCCTCTAGAATTG
TATCCTTTTCACCATTTATTGATCTTCAAAATGTAAATGCTTTTCATGTT
GTCTGTTGTAGGGCCAAATTGAAAAGTGCCGTTTCTGTCACGGAAGGAAA
TCAGAGCCTTTTTTGGTCTATTTTTGAAAAATGGTAAACTTAATGAAAAT
AGTATTAGTCCTGAATTAAAGCCTTCATNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTGAAGGTTCTGTCACGGAAGGAACGCAGCAAAGACATTAAA
AAAGACAAAAGTATGCTGATTCAGATTCCTGTGAATTTAAAGATAATTTT
AAAACCAAAATACCACTAAAAGAAACTTATGTCTATCTGCTTGTCATTGA
AAAAGAACTGAGTCAAAAAAATTAATTTCAATGGCTACAGGCCTTTGCAA
CTGAGAAAGGTCAGTGTCACGGAAGGAAAAAATTCCTATTTTTCAAAATC
AGCAATAGCGTAAGAAATGTTGACTGAAACATCATGTGACACATCATATC
ATGAATCATAGCCATTTTTACTATTCAGTTCATTTCAAAACCTTGAAACT
GTATTTTTATTGTTCAACCATAATGGTGATAATAATTAGGAAATTTTACA
GGAAAGATTTTATTTTTTAAGCAAAAAAACGTAAAAACGCGACCTTGCAA
GCCAGTGAGCTACTTCCAAAGGCTCTAATTAGCATATTTCCATGGTGCTG
AAGCGATTTAGAGGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACGCTGTAAGCTTAC
AGCGCTGTACTGGAGCCTTAGTTTTAAGCTTATTCTGAGCTCCATACAGG
GCTGAGCTGGTTCCCAATGGTCATAAACCCTGTAGGACACTCCCCTGCAA
TGGACTAGACCCATTGAAGTCCAGCAAAGGGGGCAGAACCGACAAATTTT
CACTAAAATAGCTTTAAAACGCTTAAAAAGCTCTATTTAAGCGTTTTTAA
GGCTTTTTTAAGCAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAAAATTTAAG
GGTTATTTAAAAAAAAAATCACAGTTACTTATTTTGTTTGTAAGATTTTT
GATTTTGTGTTTTGGTTGACCACTTTTCAATTTGGCCCAGTAGTACTCTC
TTGATTGTGTAAAATGACCGAATCTACCAACTTTTTGCTGAGAAATGCTG
CTCTGAAAACTTTTCTCACAATTCTTAACAGAGAGGCCTGATAATGTCTG
GATTTATTATGAGAGAGATGATGTTTCGAAATAAATACCATTATAAGTAA
AATTAATATAAAAAAGCTATTGGATATTCACTTGTGTGCAAACTTGAGAC
ACAAATCGTTTTTTGGCTGTTTCAGAAAGTCTCTATTTAGAAGGTAGTTT
TTACATGAGTATTCCTTAACGATAAACTTCAAACAAGGCTTTACTCCGAG
ACCCAGTTCTTCAAACTAATAATTTGAACAAGGAAACAATCAGCTCAAAA
GATGAATTCATGAATCGTATTTATGATGCATTAGGTATGTCTCTCTAATT
TGCATATTCAGGATTTTTATAGAATTCAAAGGCCTTGGCTGGGTAGAGCC
CTGTATTTTATTTGACTCCATGACTTTGTTTTTAATGTACAATACAAATA
TGGGAAGTGTACCAAAGGATTGATATAAAGTATTTCTTTATCTTAATAAA
CCAACACTGTTTGTTTACATTAGTTCCAGTGGAAGAGAGGGATGAGAATG
AACTCTACCGGACATACTCAAGTTTGATTGACCGCTCACAAATATTATCA
TCTCAATTGAACAACCTTTCCCATAAATGTAAAGACCTTGAAACGCAAAA
AGACAAGTATTTTGATACACTGTGAGTATAGAAATGAGACAACTTATCGT
TCATTATACTTTTGCTAGACAAAGTCAATAATGAGAATTGTGTTTAGTTT
GTTTTCTAGGGGTGTTGGAGGTCATGTTTTATTGCACATCTAAAGGAAAT
GAAATATTCCTTTTCTTTCTAGAGAGTCTTCAATCATTACGATACAAAAA
CTTGTTGGTTATGAAGAAGCTGGTCTACAATCACAGGTTTTTTTCATTTT
TATTTCCGTGGTCCCCAGAGAAAATCCCGTCGTTCAGTTGAATAGTTTGC
CTTCACAATTAGTCTACTCGTCTTCAGTTCAAGAATTTAAAGATAATCTT
AGCGTAGTTTACTTCCAATAAGTAAAGTTTGGAGACTGATGTTTAAAAAA
TTCAGTCTTATGAAGATTTCAAATTTCAGTTGGAATTCCGGGATTAGCTT
ATATCATTTGTAGCTTTGAAATTTGAAGTATCACAAAACTCCTCTTATTA
ATATATTTCAGATGGAGGATATGGTAGGACATCTTGAGCAAGATTTAACG
TTAGCTGAAGTGCAAGTGAATGACATCATAAAAGATGTAATGGCCAAGAA
AAAGGTAGGTCCATCAAGGTTAAGTTAGGTAGATCCTGCAAATTCTAAAA
ACAAAGTTTCATGTGAAAGTTTTTCATTTTCTTACAGATTTTGTATACAG
AATAACTTGTAATTTTAGAGTCCATCAAAATTTCTAAACATTTTGTTCTT
CTGGCCTCTCAGGTTTTTGCTATACCAGGATATACGGTTATAGAATGTCT
AATTCAACAAGGCCAGTCAGTTGTAACGAATCTATAGATAATTGCAATTC
TTTCCAATCCTATTCTCTGAAACAAAGTCATGGTCTTCAATCTTATACAG
AGTATTCTACTAATAATCAACTATGAGTGAATATGGAAAACCTTGGCGCT
GTATTATATCTTATTCTCTCAGCTTTTGGCGACGGATTCTTTGAAAGAAC
TGGAGAGAAGCGTATTCCCGAATTTCTTCAACGACCCCACACGATTGAAA
CGAACAATGACTGAGATACAATCTAGAGTACAAGCCTCATAAAATTTTTC
GAGCGAGATTATTTTTGTAAATATCGAATATTTATTATTGCAAATGAAAA
AAGCATATTTATTCTGATTTCAATACCTTGATGGATTTGACCAACTGCAT
TCTACTGGGCTATTCCATTTTACATTCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022331TCONS_00022331Clytia hemisphaericatranscript
TCONS_00022330TCONS_00022330Clytia hemisphaericatranscript
TCONS_00022329TCONS_00022329Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022329-proteinTCONS_00022329-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000411supercontigsc0000411:106340..116418 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
HAUS3HAUS augmin-like complex subunit 3 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
32.09	32.58	11.12	8.81	24.62	19.24	22.21	20.16	17.7	15.78	14.77	12.12	14.33	13.01	12.2	13.57	12.42	16.45	11.12	6.51	11.91	9.74	47.48	43.16	17.82	20.65	9.41	7.78	24.25	27.77