XLOC_012521 (gene) - C. hemisphaerica

Overview
NameXLOC_012521
Unique NameXLOC_012521
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000411:106340..116418-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012521 ID=XLOC_012521|Name=XLOC_012521|organism=Clytia hemisphaerica|type=gene|length=10079bp|location=Sequence derived from alignment at sc0000411:106340..116418- (Clytia hemisphaerica)
ATGTAAGACATACATGAGTACTAAAAGGATTTTCACTAATTTTTGACATA CCCCCACCTATTTTTCGAAAATGTTATTTTAGTATACATGTACTAAAATT ATTTTGAGCAATTTAACATAGATACCACCCATATTTTGCCTTTTTACGGA TAGTAGGCACAATGCCCCAAGATTACCACTGATCCTTTAAGCTCTTATTT TCTTAGATTCCATTTTAAAACTTGTTTATCAGTTTTAAAAAAGAAAAATA TCTATGTTTTAAAAAGATTTGGAAAAGTAAAAAAGATGAGTTATAACAGC AAAACAAAGCATTTGAGGTAAGTCCTTGTCCATACTCTTAATCAATTTGA AGCAAAGCTTTACTGTCACAAGGTAATACTTCAAGCTTTTGCAAATTGAG TCTTTTACAATTTAAACAAGAAAGTTTTTGAAATAGATTTTTGGAATCAT AGTATAAACTTCTAATATCGTTTTGCTTTTTATTTTTAGTACCTTAAGGG GATTAATTTTCGCGGGGAGTTTTTCCGAAATTTGCGAAAATTAATTCTCG CAAAAATTTTAAAAACCTTTGGATTCTCAAAATTCGCAAAATATAATTCT CCCGAAAAATTTAACATCATAATTTTTGCCTAAATCCCTAGGAAAATGAA AGAAATTCAATCAAAAAGGGGCTGATTCGCGAAATTTTATCCTCGCGAAA ATTTTCATTTTCTGTGCTCGCGAAAATAAGTTCCCATGAGAATTAATCCC CTTAAGGTATCAAATAATCTTAAAAAGATCAATACTTTTTCTTTTATATT AAAGCAAGTTTTTATAGAAGATGGTAGTTTTAAAAAATCTTTTTAATTTT ATGATACATTAAAAAGGTTTGCATGCCTTAAATATACAGTATGTATGATA GTCTTACAGCGACGGTCATCAGCCAATGTCAGACTGAAAAAGCCTTTTGA GTGACTGAAAACCTTTTGTATTTTATTGGTCGTGATGTCCGGATGAAAAG AAGAATAAAAACATTAACTTGATTTGGGAACAAATCTTCTATAAGTCCTG CCTCTTACTCTATTCTTTTTCTAATTGCCTCTTGTGACTTGTGTTTCTAC GATTACTTTTATCAAATCGCTTTCTTCATAACTTTTAAGAGTTTTTTCAA GTTCACTTTTTATTGAATCACTTTCTTTGTAACTTCTAAGAGTGTTTCTA AGTTCACTTTTTATTAAATCACATTCTTTGTAACTTTTAAGAGTTTTTCA AAGATCAGTTTTATCAAATTGCTTTCTTCGTAACCTTTATGATTTTCTCA GATCACTTTATCAAATTGCTTTCTTCTTAACTTTTAAGAGTGTTTCTACT TTTTTTTCTTACTGAGGTTAGTAAATATATCCTGTTAGTTGAAAAATTAT GATAATTTTAGAAAAAATAAGACTGAATGACCGAGAGGATTTTGAGTTTG ACCAATTGGATTTTATTTTAGTCAGACATCATGTCCGAGTGACTAGAAAT ATTTATTTACAGTACTGGTCTTATATCACATTGTCATATTTTGTTTAGAT TGTTGGAAGACAAGTTAAAAGGGAAGGTTGCATCTCTTACAAAAGCTGAT GAAAATCATGAGTTACATTTCAAGAGAACGCTTGGTGATGAAAAGAGTAA ACATGTTGTGAAAGTAAGCAACTAACCTCATCCCTTTTAGAAGTTTCGTG TCCTTTTCAGGTTTCATCGTCATGAAATAATGAACCATTGTTCACTTCTT TGAGAGTTTTGGTTGGGAGTACATTCCACTTGCTTAAAGTTATTATTGTT ATAAATGAAATGTCTTTTTGGGTGTCTTCTAATTAAATTGGAATATTTTG ACAGCATTTACAATAATGATGACATTCAAAAACCATTTTGAAATTCGAAA ATTTTTCCTGAAACCTATGGGAAAATGAAATAGTTTGACAGTTTCACTAA TGAATAAAAAATACAACAAAAATTTTTTTTCTAGCTTGAAGCAGCACTAG GAAGTCTTATAAAAAATGTGGAAAAACTTGCTGAACTTTATCAGAAGAAT GATGATCCATTAAGATCTGGTAAGGGATAGCAGATACAATTGTATTTCTC ATAAAAAGAAAAAGGCACTGAAATTCAAAATGCAAATGAGATGATATAGG ACTGTGGTTAACTTTTTTAATTCCTATTTTGTGGTGATTTATAGCTGCAT TATTTTGTAGGGATGTTAAGAGTAAACAACCTTGAAACTTATATATTTAA ATTTTCTAGACAAAAGTCATCCTTTTCTTTATAAACAACAAATTGATGAA GTTCAGCTCGAAGAAGAGTCCTTCACTAACTCATTGGCTCTTTACACAAA AAAACAGTTCTTTGAGGTAAGATTGTACATATTTCTTTTATTCGATTATA TCATTCAGATACTGACCAGATTCTACTTGGTGCTGCTTGGTGTTATAAAA ATAGTACATGGAGAAAACTAGAAATGTTTTAAAAATCCAGACATTGTCCA GCATTTGATAAAAACATAAAACTTAACTTCAATCTTGAGCTATCATGCTT CATATTTGGCTAAGTAGCTGAAAAGGTTATAGCAGAAAAAATATCTTGAT CAATGTTTTTTTGTTCTTCTTTTGCACAACATCTTTCAAACCAATAAAAT GAACTCACATTATGATAGCTCAAAATTTCCTTAATCTAATTCATGTTAAA AGTTTTCGAAAATTATAACATAATTTCTAGTATGTTAAAGTTGAAAATTA TAACATTGTCAACAAGAGTCAATTCAATTTGTACTTTAATCAGATTAAAT TTTGCCAGATTAAATTTTGCAAGCGAAGAAAATTGTGAAAACAGCTGAAA AATAGCCATTTTGTGCTACAAATGAAGACTTTGAACTGGTTTTCCGCCAA AAATGCGATTAAAAAAATTTTGTGGGTCGGGAATCTCACGCGTTTTCGCG AGTTTTAATTTCACGAAAATGGCAAAAATTCGCGAAACTGTGAAATTTAA TCTCCCAAAAGTTAATCCGATTAAAGTACACTGTTTGAAAAACTCAAATC AATTTTTTTTGTTTTTCTCCAAAAACTAGGCTTAAAGCGTAAGAAATCGA TTACAATTTTTATCAAAACATATTGCCCTTGATTTTAGGGAATAGCAGAA TTGGCAGGTTCTAAAGACCAGACAAAGTATGATTTTTTGGATACTAGCAA ACCAGAAACTCTACTGTTCAAAGGTAATGCGATGGTATATAGGAACTTGT GAGATAAGATGAAATATATTTAATGGACATTAAGTCAATGCAAGACATTG TCAAATGAACTTGACCGAAGCAAAGTTAATTTTTATTGTTAAACATGTTT TGATATATTAATATCATCGTCAGTAATTAATTTAGTGTTTTAAAAATAGA TAAAGATTAGTTTTAATGCATATTATACTTCTTTACTGCTATAACCTATT ATTTTTCTTTGCCTTGAATGAAGTTATTCATATTTTGTAGGAGAAAGAGA TGAGATAAAAGCAAAAGATAAACAAGAGTTAAAGAGACTTCAAATACAGT AATGTATTTTTATGCATCAAATTTCTCAGTTATTGCTGGTTCTTTATGAA AATTATAATCTTCTCCAAAATACAAAAAAAAATAACTTTTTGCAAAATAT TCCAGGAAATTAAGCTTCTTATAATAGGTAATTGTCTTGTATATGTATTG TATTTTATGATCAAGTAAGGGGTTTGTTTTTAGGTATCAAGAAAGTGAAA TCAAGCGGCTCAAAAGTGAAATGACTTTGGAGAACTTGAAGCGAAAAATC AAGATTGCAGAGTCCCAAGTAAAATCACTTAATTTGGGATATTCGACTGT TGACGCAGACATTAACAAGTAAGAACTCTACCCTTCTATTAAACATTTTA TTTGAAATTTTCAGAGAGATTTGTTTTGATATTTTCGCACAAGCTTTTAA ATAAGTTTATTGGCAGGGAAATAATCTTTGATAAATCGTACATTATTTTT GTCTTTTTATACATATACCAGGAACACAAAGTTGACTGTAATGAATGAAA AGAGTAGAAAAGCATTGCAAGATGATTTGGATGAACAAATGATACCTTTA TTGAATGAACTTCAGCAGTTACATGGCATCAAAGTGTTGGAAGGAAATTA TGATTTAAAGATTTTTCGTCAAGATTATTTTCTTTCCAAGCAAAGTGAGG TAATCCATGGATTAGTTTGCAGCATCTTTTTCGATTAAAACCACTACATT TTTGAACCACAAAGGAGAAAAGTGTCACAATCAAAAGTAAACAATTGTTT TGTAATTCTTTCAAATTCTGCTGTCAAAGTTGGTCGAAGAAGACCTCGGT TGGTCAAGAGAAATATGCTGTTAACTTGTTCTGTTTACTTTTAGGTCATA AATCAGCTTTTGTTACAATGTTCCAGAAATTATTTCCTTACAATGATGTA CGAGATTGAATTGAAAGAACATCGTAAAATTTATCATTTGATCGAATCTT CAAGAACATTGTTAGCATCAGAAATAAAGAAAATCTCCTCTAGAATTGTA TCCTTTTCACCATTTATTGATCTTCAAAATGTAAATGCTTTTCATGTTGT CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNTCCATTATTTTGTTGAATTTCGATTTTTTTT GGTATTTCTTTAGTTTTCGCCATTTTGATGCATTTCGACGAGCACAACCA GCCAGAAAAAAATTTGACGTCAAAATGACGTCTTGTATATGTATTGTATT TTATGATCAAGTAAGGGGTTTGTTTTTAGGTATCAAGAAAGTGAAATCAA GCGGCTCCAAAGTGAAATGACTTTGGAGAACTTGAAGCGAAAAATCAAGA TTGCAGAGTCCCAAGTAAAATCACTTAATTTGGGATATTCGACTGTTGAC GCAGACATTAACAAGTAAGAACTCTACCCTTCTATTAAACATTTTATTTG AAATTTTCAGAGAGATTTGTTTTGATAGTTTCGCACAAGCTTTTAAATAA GTTTATTGGCAGAGAAATAATCTTTGATAAATATATTGTACATATTTCTT GCTCTTCTCCTTGAACTTCACCCCTCTATCATTATTTAATTGTCATTATT AATTATTTTTACCAACCTTACCCTCTATATTATTGTTAGAAGATGTGCTA TTTTTTGTCTTTTTATATACCAGGAACAAAAAGTTGACTGTAATGAATGA AAAGAGTAGAAAAGCATTGCAAGATGATTTGGATGAACAAATGATACCTT TATTGAATGAACTTCAGCAGTTACATGGCATCAAAGTGTTGGAAGGAAAT TATGATTTAAAGATTTTTCGTCAAGATTATTTTCTTTCCAAGCAAAGTGA GGTAATCCATGGATTAGTTTGCAGCATCTTTTTCGATTAAAACCACTACA TTTTTGAACCACAAAGGAGAAAAGTGTCACAATCAAAAGTAAACAATTGT TTTGTAATTCTTTCAAATTCTGCTGTCAAAGTTGGTCGAAGAAGACCTCG GTTGGTCAAGAGAAATATGCTGTTAACTTGTTCTGTTTACTTTTAGGTCA TAAATCAGCTTTTGTTACAATGTTCCAGGAATTATTTCCTTACAATGATG TACGAGATTGAATTGAAAGAACATCGTAAAATTTATCATTTGTTCGAATC TTCAAGAACATTGTTAGCATCAGAAATAAAGAAAATCTCCTCTAGAATTG TATCCTTTTCACCATTTATTGATCTTCAAAATGTAAATGCTTTTCATGTT GTCTGTTGTAGGGCCAAATTGAAAAGTGCCGTTTCTGTCACGGAAGGAAA TCAGAGCCTTTTTTGGTCTATTTTTGAAAAATGGTAAACTTAATGAAAAT AGTATTAGTCCTGAATTAAAGCCTTCATNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNTGAAGGTTCTGTCACGGAAGGAACGCAGCAAAGACATTAAA AAAGACAAAAGTATGCTGATTCAGATTCCTGTGAATTTAAAGATAATTTT AAAACCAAAATACCACTAAAAGAAACTTATGTCTATCTGCTTGTCATTGA AAAAGAACTGAGTCAAAAAAATTAATTTCAATGGCTACAGGCCTTTGCAA CTGAGAAAGGTCAGTGTCACGGAAGGAAAAAATTCCTATTTTTCAAAATC AGCAATAGCGTAAGAAATGTTGACTGAAACATCATGTGACACATCATATC ATGAATCATAGCCATTTTTACTATTCAGTTCATTTCAAAACCTTGAAACT GTATTTTTATTGTTCAACCATAATGGTGATAATAATTAGGAAATTTTACA GGAAAGATTTTATTTTTTAAGCAAAAAAACGTAAAAACGCGACCTTGCAA GCCAGTGAGCTACTTCCAAAGGCTCTAATTAGCATATTTCCATGGTGCTG AAGCGATTTAGAGGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACGCTGTAAGCTTAC AGCGCTGTACTGGAGCCTTAGTTTTAAGCTTATTCTGAGCTCCATACAGG GCTGAGCTGGTTCCCAATGGTCATAAACCCTGTAGGACACTCCCCTGCAA TGGACTAGACCCATTGAAGTCCAGCAAAGGGGGCAGAACCGACAAATTTT CACTAAAATAGCTTTAAAACGCTTAAAAAGCTCTATTTAAGCGTTTTTAA GGCTTTTTTAAGCAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAAAATTTAAG GGTTATTTAAAAAAAAAATCACAGTTACTTATTTTGTTTGTAAGATTTTT GATTTTGTGTTTTGGTTGACCACTTTTCAATTTGGCCCAGTAGTACTCTC TTGATTGTGTAAAATGACCGAATCTACCAACTTTTTGCTGAGAAATGCTG CTCTGAAAACTTTTCTCACAATTCTTAACAGAGAGGCCTGATAATGTCTG GATTTATTATGAGAGAGATGATGTTTCGAAATAAATACCATTATAAGTAA AATTAATATAAAAAAGCTATTGGATATTCACTTGTGTGCAAACTTGAGAC ACAAATCGTTTTTTGGCTGTTTCAGAAAGTCTCTATTTAGAAGGTAGTTT TTACATGAGTATTCCTTAACGATAAACTTCAAACAAGGCTTTACTCCGAG ACCCAGTTCTTCAAACTAATAATTTGAACAAGGAAACAATCAGCTCAAAA GATGAATTCATGAATCGTATTTATGATGCATTAGGTATGTCTCTCTAATT TGCATATTCAGGATTTTTATAGAATTCAAAGGCCTTGGCTGGGTAGAGCC CTGTATTTTATTTGACTCCATGACTTTGTTTTTAATGTACAATACAAATA TGGGAAGTGTACCAAAGGATTGATATAAAGTATTTCTTTATCTTAATAAA CCAACACTGTTTGTTTACATTAGTTCCAGTGGAAGAGAGGGATGAGAATG AACTCTACCGGACATACTCAAGTTTGATTGACCGCTCACAAATATTATCA TCTCAATTGAACAACCTTTCCCATAAATGTAAAGACCTTGAAACGCAAAA AGACAAGTATTTTGATACACTGTGAGTATAGAAATGAGACAACTTATCGT TCATTATACTTTTGCTAGACAAAGTCAATAATGAGAATTGTGTTTAGTTT GTTTTCTAGGGGTGTTGGAGGTCATGTTTTATTGCACATCTAAAGGAAAT GAAATATTCCTTTTCTTTCTAGAGAGTCTTCAATCATTACGATACAAAAA CTTGTTGGTTATGAAGAAGCTGGTCTACAATCACAGGTTTTTTTCATTTT TATTTCCGTGGTCCCCAGAGAAAATCCCGTCGTTCAGTTGAATAGTTTGC CTTCACAATTAGTCTACTCGTCTTCAGTTCAAGAATTTAAAGATAATCTT AGCGTAGTTTACTTCCAATAAGTAAAGTTTGGAGACTGATGTTTAAAAAA TTCAGTCTTATGAAGATTTCAAATTTCAGTTGGAATTCCGGGATTAGCTT ATATCATTTGTAGCTTTGAAATTTGAAGTATCACAAAACTCCTCTTATTA ATATATTTCAGATGGAGGATATGGTAGGACATCTTGAGCAAGATTTAACG TTAGCTGAAGTGCAAGTGAATGACATCATAAAAGATGTAATGGCCAAGAA AAAGGTAGGTCCATCAAGGTTAAGTTAGGTAGATCCTGCAAATTCTAAAA ACAAAGTTTCATGTGAAAGTTTTTCATTTTCTTACAGATTTTGTATACAG AATAACTTGTAATTTTAGAGTCCATCAAAATTTCTAAACATTTTGTTCTT CTGGCCTCTCAGGTTTTTGCTATACCAGGATATACGGTTATAGAATGTCT AATTCAACAAGGCCAGTCAGTTGTAACGAATCTATAGATAATTGCAATTC TTTCCAATCCTATTCTCTGAAACAAAGTCATGGTCTTCAATCTTATACAG AGTATTCTACTAATAATCAACTATGAGTGAATATGGAAAACCTTGGCGCT GTATTATATCTTATTCTCTCAGCTTTTGGCGACGGATTCTTTGAAAGAAC TGGAGAGAAGCGTATTCCCGAATTTCTTCAACGACCCCACACGATTGAAA CGAACAATGACTGAGATACAATCTAGAGTACAAGCCTCATAAAATTTTTC GAGCGAGATTATTTTTGTAAATATCGAATATTTATTATTGCAAATGAAAA AAGCATATTTATTCTGATTTCAATACCTTGATGGATTTGACCAACTGCAT TCTACTGGGCTATTCCATTTTACATTCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022331TCONS_00022331Clytia hemisphaericatranscript
TCONS_00022330TCONS_00022330Clytia hemisphaericatranscript
TCONS_00022329TCONS_00022329Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022329-proteinTCONS_00022329-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000411supercontigsc0000411:106340..116418 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
HAUS3HAUS augmin-like complex subunit 3 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
32.09 32.58 11.12 8.81 24.62 19.24 22.21 20.16 17.7 15.78 14.77 12.12 14.33 13.01 12.2 13.57 12.42 16.45 11.12 6.51 11.91 9.74 47.48 43.16 17.82 20.65 9.41 7.78 24.25 27.77