XLOC_012525 (gene) - C. hemisphaerica

Overview
NameXLOC_012525
Unique NameXLOC_012525
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000411:195127..199391-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012525 ID=XLOC_012525|Name=XLOC_012525|organism=Clytia hemisphaerica|type=gene|length=4265bp|location=Sequence derived from alignment at sc0000411:195127..199391- (Clytia hemisphaerica)
GTTCGAGATGCCTTGGAGTTTTTACAAGATACTTCACTAATTGGTCATTT
AAAGTGATAGAGATGACGCGTTCTTTAGAAAAAGTAATAAGATTCTTCTA
TTACATCTTAACGACCAACCAAATCAAATAAGAGCTTGTTTCAAGAGATA
CCCTTTTTCCCAATCCAAGGGATTTGAGGAATTGCATAACTTGGGAGAGC
ACTCATATAATTGATGATTGTAATATTATGTTTCAAAAAAAAGTTATCAA
AACTGGATGCTTTATGGATCCATAAATTTCTATAATAATTAAATTGATGA
ATATTATAATATCTGATGATAAACGAGTAAATATAAATAACAAATTGAAA
ATAAGGAGATACATATCAAAGTCACACAATAAAAAGGAAACTTTAATAGC
GAACGGCAGGATGTATGTAGAGTTCGAAACTAGTGATTGGGTTGATATTC
ACAGAATTAAGATAACAATTATGAAAAAATTGTTAAAGTGTAAATTTAAT
GTTAAAGCCGCCTAAAATTTCGTAGAAATGTAATTTTGAATGCTAAAAAC
CTCAAGGTATTCGTTGATACTTGTGTGACCGAGTGAAACAGATAATACAG
TTTGATTAAGAATACAGACACCATCGTTGAGTGGTTAAAAAAGAAGATAT
GATAGGTATGGTTAAAGACATTCTTAAAAAATTGAAAATCCAATAAAATA
AAACTTAATTAAAAAGTTAATGATGTGGTAAAACATCGCCAAACAAACAT
AAATATATCGATAAAAATTGTTATTGTAACTGTTGTCTTTTTAAGGACTT
AATTTTTTTTTTCATAAAACGAAAATTAGGCATTGAAATCGTTTGCTTGT
AGTTAATTTTTCTAGAAATAAATAATCTTTGTTATATCTATATAAAAATT
TAAAAAATTCTCTTTGTCTCTTTTTATTAAAATTCATCTAAATTTAGAAC
ATCTTATTTTGGTAAAAAAATATTTAAAGATGCATTGGAGGTGCCTGCTC
TCCAAAGTGATATGGTACATATTGTGTGTAAGCAAGTTGAAAAAAAATAA
GACAATTTAAAAAACCTTCGTACGTGTGAATCGAAATTGCCATCAAATTT
GTCGAAAACACATTCAAGTAAAAAATGCCATCCACTCTAAACTACAACAT
ACATCATAGTAGAACTAGTCTTAAAATAATAAAAAAATCTTCTAATTTAT
ACCCTTTCTAAATAGAACCATTTAAAAGGCTTCTTGAGAAAAATAAAATG
AATCTATAACATTTGGAGGCCAGGTCAGAAAACTTTACAGCTTTGCGCTG
TATAAACGAACTACCTTTAGCTCCATTGTAAAAATTGCCATTCTGAAATA
ATTTTTTTCTTGCTTTGTTGAGCTTAAAAGTACAATCTGCTTTTAAATCA
GGGCAACAAACTTATCGCAGGTTTCTAAATATAGTGATTCACNATAGCGA
ACGGCAGGATGTATGTAGAGTTCGAAACTAGTGCTTGGGTTGATATTCAC
AGAATTAAGATAGCAATTATGAAAAAATTGTTAAAGTGTAAGTTTAATAA
AATTTCGTAAAAATTTAATTTTGAATGCTAAAAACCTCAAGGTATTCGTT
GATACTTGTGTGACAGAGTGAAACAGATAATACAGTTTGATTAAGAATAC
AGACACCATCGTTGAGTGGTTAAAAAGAAGATATGATAGGTATGGTTAAA
GACATTCTTAAAAAATTGAAAATCCATTAAAATAAAACTTAATTAAAAAG
TTAATGATGTGGTAAAACATGGCCAAACAAACATAAATATATCGATAAAA
ATTGTTATTGTAACTGTTGTCTTTTTAAGGACTTAATTTTTTTTTTCATA
AAACGAAAATTAGGCATTGAAATCGTTTGCTTGTAGTTAATTTTTCTAGA
AATAAATAATCTTTGTTATATCTATATAAAAATTTAAAAAATTCTCTTTG
TCTCTTTTTATTAAAATTCATCTAAATTTAGAACATCTTATTTTGGTAAA
AAAATATTTAAAGATGCATTGGAGGTGCCTGCTCTCCAAAGTGATATGGT
ACATATTGTGTGTAAGCAAGTTGAAAAAAAATAAGACAATTTAAAAAACC
TTCGTACGTGTGAATCGAAATTGCCATCAAATTTGTCGAAAACACATTCA
AGTAAAAAATGCCATCCACTCTAAACTACAACATACATCATAGTAGAACT
AGTCTTGAAATAATAAAAAAATCTTCTAATTTATACCCTTTCTAAATAGA
ACCATTTAAAAGTTTCTTGAGAAAAATAAAATGAATCTATAACATTTGGA
GGCCAGGTCAGAAAACTTTACAGCTTTGCGCTGTTTAGAAACGAACTACC
TTTAGCTCCATTGGAAAAATTGCCATTCTGAAATTATTTTTTTCTTGCTT
TGTTGAGCTTAAAAGTACAATCTGCTTTTAAATCAGGGCAACAAACTTAT
CGCAGGTTTCTAAATATAGTGATTCACCCGCTCAAAGACAAAGCCGTATA
TAATCTGCAACGAGAAATACCCCTAGAATTCTGCAATACCAAACCATTCT
CATGCAAACCAACGTGTAAAATTGCTCAGCAGCATTTCTACAAACAGGGT
GAATTTGATTATTCAAGATGGAGTAACTGCACTGAAACAGTAAGATGTCA
AAAGATGACTTTCAATCATATCGACTTTCCCACAAACCCACACTCCGTTC
ACTCAGAATCACTGTCAGCGGTAAAATCGGAGAAGAATTTTTTTGTTTTA
ATCTCCTCCTCGGTGAGTTCAGTGGGCGGTTTCTCGTCAATCGGCGGTTT
ATTGCTAGACACGTGCTTTATGGATTTTCGCTTAAGATCTATGTGTTTCT
GTGAGTCCTTCTTCTCTGAGTCCTTCTTCTTCTGATTGTCTTGAATTTTA
CGCATCAGTGAGCTGGGTGCTAACAGAGCAGGTGCAGCGAATTTATTCCT
GCGCGCTTCCAATCGTTTACGCTGATCGAGGGTGATGTCGATGGATTTGG
CCGTTCCAGAAAACTCTTGATCTTTCTCATTGGCCACTTCTTGTTGAGAG
ACGGCTGCGAGACCTCGATCACGTGTGCCATTATTCAATCTGACAGGCGA
TAATTTCCGATCCTTCGATTTGTCAAACGAATCGCGATCTTCATCTTTCT
TTCGGCCAGAACCGGAAGAGAGGCCACGATCTTTCAAGGAGGAGACTCCT
CTTTCTCGAGCTTTCTTCCACGAGGAGGTCTCATTTTCATCACGATGACG
GTCTCTGGAGGAGGATGAGCCATAAGAATGGCGGCTGCGTTTTGACGAAG
AAGAGGAGCGATGGGAGGAGGAGCGGCGGTGGTGGTGGTCATCGCTTTGG
CGACGTCGCTTTTCCGATCGGCTGTGCGAATAATCGTTGTCATCAGAATC
AACATCTCGCTTTCGTTTCTGTGACAACAAGCGCTGGTATTGGTAGTTGG
CATCATCTGAATCACTATCGTCATCCTCGTCACTGGAGTATTCCACGCAT
CCATCTTTCTTCAATTTATCCAACATGTCGATGATAGAGGTGGCCAGTTT
GATGTTCCCTTTCTCGATCAGATGCAAATGGTCGGTGAAATAAAGCGATT
CATCCAGCTGACCATCCTCCACGACCCAATCATCATCCTGCTTCATGTAA
TAAACTCCCTCAAAGTCTCTACGACACATCTTTTTCACTATCTTGTTCAC
TTTCTTGATCTTATCACGTCGATAAGAGGACTGGTGTAAATCCCTTGGTA
ACAAACCAGTCACTACCACTTTCAGGTCCGGAACTTTCTCTTGAAACGTG
ACGGCGATGGAGAGAATACCATTGGCGATGCAGGTGGGCGTATCACGGTC
GATGTTGTTGGTACCGCAATGCAAAACAACGAACTTGGTGTTGGGTGAGA
TGTCGAGGTTTTCAGCGCGCCACAACACGTGCTGCGTTCGATCGCCTCCG
ATACCGAGGTTGAGGGCGTGCAACGGAGCGAAAAACTTTCTCCAAATATC
ACTGTACCGAGAAAGACCAGCAACGATAGAGTCTCCACATAAAATGTATT
CTAGATTGGATCGTTTGGCCATGGATTCATGTTTCTCATGCATGTTATAC
CATCCAGCTTTGTTGTCTCTACCGACAGGTCGTGTTGCAGGCGATGTGTT
ATAGCCTGAGAGGTCGAGTTTGGATGAGAAGGAGCCATTGTTGCTGTCGT
ATGATCGGTTTGACGGTGATTTGATGGGCGTTGAATACGAAGACATCTTT
GATGAATAGACCGCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022339TCONS_00022339Clytia hemisphaericatranscript
TCONS_00022338TCONS_00022338Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000411supercontigsc0000411:195127..199391 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.38	0.07	0	3.45	2.86	0.4	0.85	2.27	3.8	4.46	0.79	0.44	0.44	1.92	1.43	0.37	2.16	1.47	0.86	0.36	1.67	5.13	1.89	0	0	0.36	0.57	1.98	3.08