XLOC_013100 (gene) - C. hemisphaerica

Overview
NameXLOC_013100
Unique NameXLOC_013100
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000450:171785..179436+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013100 ID=XLOC_013100|Name=XLOC_013100|organism=Clytia hemisphaerica|type=gene|length=7652bp|location=Sequence derived from alignment at sc0000450:171785..179436+ (Clytia hemisphaerica)
CACATCTTTATAACATGAAGATTTACCTACCGCGTTTTGTCACTGATTTT CGTAGAAGTGAGTTGAATCTTTCAAATTGTATTACCTCGTACCGTAAACT CTCTGATAATCACGGACGTGTATCATAAATTTCATGTGCTATAACGAAAC TTTCGAAAAACTTTATGCAAAATAGTGCCAGGGTGAGATAAAATACTCTT CTTGGGGATAAGCAATAAGGTTAAACAGTACCCCAGTACCCTATTAAACT TATAAAGAGTCAATATAACAACTGGACACGGACACTTGAGTGTCCAGTTG CTTTATTGTTGTTAATTCATTTTTCTCTCTTTGTATTTTACACGtccttt tttttacaagaacatccaaaaaattttgaagccttcttaactttttttag ttttaagcctgaaaacgttcttaatatgttcttattttcaccattttttg agcatctTTGTCCATTTACCCAAGAAATTGGGTATTGGAGTCctcaaagt cttaaaatgttctcaacttattcttaactttttggccaccgaagccttac gttcttatataatttgttcttataaaaaacgtgtagtattgTTTAACAAA GATATCATACTTTTGCttcattcttcatttttctttcatttacaGCTACT CCCGATGCGAACGATGAGTCTTCGAAAGGGGAGCGTCCAAAAACCATCAC TTTCCGTACAGACAGTATCGAAAGTCCACCTTATTCACCTCTTGAGCCGA AAAGTCTCAACCTGAACGCGTTACAAAATATGGACTTGACGCGACCGGAT TTGAAAGTAACCACACCAAAAGGTTACACACCAACCTTGACCACTCGCCC TGTCGTTGCCACAATCTCAAGTCTTGTTAACAGCACAGTGAAATCGCCTT CGCCTGCCGAACGAAAACGTACTCCCACTCCAACCCATTCAAAATCAACG AAAAAGGAGAAGAAAGAATCGAAGAAAACTGAATCTCCTCAATCCTTACT CTCTCCGCCAACTAGTACCAAAAGTAAAAGCCCTTCTCCTAAGCTATCCA AGAAATCGAAACCAGCTCCTCCATCGCCCGCCGCGCTTGCTGCAAAAGAG AAGGAACGTGAACAGAAAGAAAAGGAGAAGAAGGAGAAAGAACAAAGAGA TAGAGAAAGGCGGGAAAAGGAGAAACGAGAAAAAGAGCAGAGAGATCGTG AAAGACGAGAACAAAAAGAGCGCGAAAAACaggaaagagaaagagaaaaa caagaGTTGAAAGAACAAAAGGAACGCGAAAAGCAAGAACGAGAACGCGA AAAANAAACAAGAGTTAAAAGAACAAAAGGAACGCGAAAGGCAAGAACGA GAACGCgaaaaacaagaacaaaaagagcgcgaaaaaaaagaaaggGAGCG TGAGAAAGAGCGACAGAAACAAAGAGAACTTGAATTGAAAAAGGAGAAGG AAATACAAGAGGAGGAAGAGAGGCTGGCGCAATTCGAAAGAGAACGTGAA CAATCCGACCCTTTCGATGATGACCCGCCCTCTTCGCCTAATCGCACTTA TCTTTTACACGCCCCACGGGAAGATTCACCCACTTCCACCCTCTTCAGTC CGCCTCGCGTTCGAATAGCATCATATCAATCGGACAAAAAGAAACCTAAG GACAAAGAgaagagagagaaaaaagacTCTAGTAAAGAAGACAAGAAATc caaacacaagaaaaaatctTCTACGCTCAGTAGTCCAGCTTCGTCCATGG GCTCACTAAAATCTCCGCCTTCCGCCAAATCTGATTTATTATCTCCGCCC AAGCTTTCACAACCCATAATAAAACATGAGAAATCTTCTAATAAAACTGT TATGTTCCCACCAGATAGTTCACCTGATATTACAGACTCTCCCGCAAAGC ACACTTTCGCGTCGCCTGAGGAACGGAAATCTATCAAACAGGAAGAGGAT GAAAGTCCGTTGAAAATAAGCCCGATCTCTTTAAGTAAACACGTGAAGAA AGAAGCGAAAACAGACGTTTCTGAGAATGAAATCGACGTCACCTCCTTTT CACAAGGAGAAGAAGCAGTGCCTAGTTATAGTGAATCCTTTCAACCAAAT ATGTTCTTCCCAACCAAATTCAAAgacgaaaagaagaaaaagaagaaaaa gaaatctgAGAAAGATCGAGACGAAAAAATGAGAAAGGTTTGTGTCCCAC TGATCTATTAGACGGGGTTTTCTTATCCTTCTTCGGGGAAAAAAGCTTCC TGCAAAGTGAATTTGTTTAATTCTTCCTGAGATGCGTGAAATTATTGTCG GCATCGTTTTCAATTTTATTAGGTTCACAAAAAGGTTTCTCTCTTTAAGG TGAATTTTCTTGagttctaaaaattttgaaagaaataatcTTTTACCATT Gggaagaagaaagataaacttaaattttgatggatcatttattaaattcg actcattagatcaaaagttatgctccaTCGAATAAAAAGTTGCTtccaga aagtgctcgaaatcgTTGATTAAACAAATTAAACAGAATCATGATAACAT AATAcattagtatatttttgagtcattaaaaatgataattagctgtcaaA ATAACCTTTTGCTATATAAAGGAGAGtcgaatttcaataaaaaaagaaaa gtaaaaaaaagttgagatTTTTCAGATACACTCATTATTTTAACTCAACT CAACTCAACTCATCGGAAAATGCAGCAAAATCTAGTAAGATTCatgaaaa tacatcaaatatgggtttcgaggtaaaTCCAGCCTTACATTGACCCAGTC TAGAAGCCAAAATCTGAGTAAAAGTTCGGTAAAAGCatattaaaatgatt ttggtgACGATTTCAGACCCTTTCGAGGCTTCAGTTTCAAAATCTATGGA TTTAATTACTAAGAATTGCTCTTAATTATGTGAAGGATCTTGCatttgcc aattttaaaataagattttaataGGTCTATTTTCAACGATTTCGAGCACt gtctgaaagtaactttttattcaattgagcataacttttgatctaatgag tCCGATATCAGTTTTGATACAAGCGTGAAAACGTTCAAAAATGCTAATTA GGTATGATgttgaaataataattttttttaacattaattTTTCGAATCTC GAGAAGAGTGAATTCAGGTGAATTGGGAGTGTATTTTTGAGCGAAAATTT ACTAAATAACTTGACCAAATGTAAGAAAAcgaaataccttaagggaagaa attttcgcggaaacaaaatttcgcggttttcgcggattttgcctaaaacc gtgaaattaagttcccgcgaaattttacaaaatcgtcaatccgcgaaatt aaactcccgcgaaatttaatttatttcacgcattcccccaaattcgtact atttcaagcccaaaaacaggttttttgcttatttaataacgcttttggcc aaaaatatcctgcaaccgggaaattaaatttccgcgaatttttcgaaaat cgatgaaccgcgaaattaaattcccgcgaaaaaaaataatttgaccaacc gcgaaattaaattcccgcgaaaatttcttcccttaaggtatccaATCCCC TCTACACGCACAATCTCCTCTTACGTTTAAACGCGTTAACGTCAATAATT CCAATTTGTTTAGcatgtagactggagtcgtttataatgcatgtaataca gtagtatagtcATTGTGTGATAATACGATTAccgttacgggatttagttt gtataaaattgtCTCCTCCATTCTCCATTGGGCtttcccagaaaaaaaat ttacccccactgttgaggatattaatttttcgaagtatcgaaccccctgg atatcccactttattagtaaagacccctggatatccactcttaaaaatat gctcaaccccctggatatcctctcttataaagatgattacccctggatat cgtatttttttacttaaaaagacactttaccccctggatatccgctccct tgtagaaaTTTAATCCCCTGGATATCCNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN GGATATCCGATATCcccaacaggggggggggggcacggactatttctgga aaagcccattactttttgctttatttctactatgtctgatttagtcgtct agcttgatAGACTATTTAGCATACTTTGGACCACAACTTTCAATAATCGt tttttcttccatttgttAGAAAGAAGACAGAGAGAAGAAGAAGGATCGTA AACGAAAACTGGAAGAATCTCCAACGCCTTCATCATCCTCTACCTCCACA ATGATTCCAAAACTCACTTTGAAAATGGGAAGTGAAAAGATCAGTGACGA CCCTCCACCTGCAAAAATGTAAGCTGTTAATGTGTTCTGCTTTTACTCTT TACTGACAATAATTGGCTACAAGCTCAGTAGATTTTTGCTCTGACATCTT TGTTTGAAAAGTTTTACTACAAACTATTTTCCAGAGATATCATGTCTATG TTCGAAGTTTGCGATAAATGTCCAATCATTAagtaaagggacataaaagt agtaaaatgtaaacattgcgcgaaccacgtgtcattaaaaagaaaaatta aaatcacgtgtccaaaacaaacttgtaaaacaattgaaacaatcaaaatc agccatatttgttttgattttgtatcccgctgcatacggtttgtttacaa atttcgtttgtacttttatgtccctttaacttTAAAAGATCTAAAAACAA AAGATATTTGACAACTAAGCAACATTGCCtggtgaaaaacatttttcgga ccatcaaatctgagtttgactcgaaaagaaatttgaatctAGGAGATCAT AAATAAACAACGTTCGTTGTAAATCTTTTCTATCAGACCAAAGAAGCGAG CGGGATCGCCGCCACTCAGCTTGAAAACAGTGCTGAAGCCTTCCACGTCA CAAATcgttaaaaagaagaaagagaagaagaaagataaacacaaagaaaa atcacGTGACTTTGATGACGAGGATGATAATGTATCTAATAGTGGTTTCT ACGTCGAATCGCAAACCGATACCGCGGTAAGTGATAGCATATGGAGGCGC TTAAATATTACAAGTCTCTATTAAAGTCTATTCCATAAAATTGGTACACC GTACTTTGTTGGGCATTGCTCTTTCTTAAGGGAAAAATATACAATTAAAA GTTAtacctcgttggaaagatagttTTAAGcggattgggctcttccagaa aaaatccgttcatggggggggtggaggatatattatttttttcatgaatt atccctggacattttgatttttaaccccctggacacgggttatacccctg gacaaacatcaaatcaaccccgtggacacaaaaaattacccctggacatt ggaatttaccccctggacattgcaatttttggtattttttcaatacccct ggacaattcatcctccaccccccatgaacagattttttctggaagagccc attgatGGAATCTTGTAGGTAGATGTAGAAAGGTTTTAAATGGATTCTCA TTCTAttctcatcttcagcatagttACGATAACAAGATTTATTACTGTCC TGGTTGTGGCAAACCCGATGATGGAAGTCCAATGATTGGGTGTGACAAAT GCGATGATTGGTACCACTGGTAAGACAccttctaaaaatgaattcttaAA ATACACAAATTTCCTATCAGCAGATTCGTGTGAAGAAGTCACGAAAAAAC ATCGAATAAAActctgattggctgagacatgccaagattacctcatactt cggacatttgaaaaaaagtatGTTTATGAATACAATACCTTATcggaatt tttctaaaacagtgatgcattgtgggattgtttcgggagtattacaatgg AATTCCCTCGaagaattcctaagagatttctattctAATACCTCCAAAAA CAATCCCaaaatgcatcgcttttttagaaaaatcaaaaactccgataggA TCAATTTATAGCCAATCAGAGCTTTGatcgacgttttttcgtgactttta cATGATTCTGCTTATAGAAAATTCGTCTGTTAAGATTTAAAGAACCTGTC TGCGGTAAAGTCAGGCTGGTCTAAGGTTTTTAGCGAACTGGAAAAGAGGG CAGTTGAAATATTAGATCCGACCGAAATTTCGGTAGTACCTTGTTGTACC TAACGTGCTTACTTTGATAGACCAGCCCCCCAGTGGTAAGTGGGATCACG ATATCGcgcaatttctttttcttcaattaCGATCACGCAAATCATCAAAA TACTTGAATAATCatgcatccctttgaaaaagtccaaatcacgcatcacg gctcaaaaatcttttaaatcacGATCACATTTTGACttctgatcacgcaa tcacgaaagtaaaattccaaatcacgtaatcacgttagaaaaaagtccct atcacgccATTGCGAAAACCGCTTGGGGGCGGAGGCTCATAGAAGCCAAC CTTCATGATTTTAAACCTTATTTAAAACAAGCTCAATGTAATAAAAAGGA TACTGTTGCAGTTGGTCCCAGGTTGAAAATACAGTATACTCAGGAGTTCa acatagggtgaaaaatttgCTCGAGATAGAGAATATCTGAGATAAAGGAA GGGAAGAGTTCTAGCatgtggagtctctataactcgaatagaCAAAGAAG TCTTGTAGCCCCTTCAGTCAACATAACAAACCATGTGCGTTTCTTGCACG TGTTTGAGTTATAGAAATTCCACTGTATTGTGaaaccatagtccgtataa aaaatcccggtctggaagccttttttTCCATTGTGtcttacttgaaattt tttgctcactttttgatcatgtgattaaactttaaaccaatcccaagaga aGGAAtcggtaacgtgatcaaaaactgagcaaatcgactTTCGTCCTTTG ATAGTAACAAAAGGTTAAAACAAcaagcttccagaccagtgaCTATTGTA CGTTAAACCTGTTTCATTTTTCAGGCCATGTGTAAATATTGTTGAAGAGC CAGCGGAAGATGAGAAATGGTTTTGTCCGAACTGTCCGGGAGGtgttaca aagaaaaagaagaagaaaaagaaacgaGATGGCGATtgaatactttaatc ggattaaatttcgcgagcgaaaaaatcgcaaaattctCTGGATTTCATTT CGCGTGGACTTGTgtggacttaatttcgcgaataagcttgaaaacagctg aaaatatcaTGTTTCTCTACAAATGGAGACTGAAAATCTTGTGGTGGATT TACGtgttttcgcgagttttaatttcgcgaaaatggcaaaaactcgcgaa atcgcgaaatttaatctcgcgaaagttaatccgattaaagtacaCGTGtg cattatttttttattattttttgcgaATCGTAAAATTGTTTATATTATAT ACTGCTGTAAATATTCTCCTCTTTTTATCGGTGAAAAAATTCTTATCGAT GAATGATtcgaaaataacattttttattgtAATAACCTAACGAAAGCCTG GC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00023296TCONS_00023296Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00023296-proteinTCONS_00023296-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000450supercontigsc0000450:171785..179436 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
21 19.55 11.51 10.41 45.06 34.75 31.29 33.31 13.97 19.15 14.22 10.24 10.91 11.73 9.51 13.47 15.33 15.15 10.96 10.03 12.93 14.25 23.77 21.43 26.96 26.06 8.72 7.18 18.2 20.56