XLOC_013196 (gene) - C. hemisphaerica

Overview


Name	XLOC_013196
Unique Name	XLOC_013196
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000454:175170..181960-

gene from alignment at sc0000454:175170..181960-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_013196 ID=XLOC_013196|Name=XLOC_013196|organism=Clytia hemisphaerica|type=gene|length=6791bp|location=Sequence derived from alignment at sc0000454:175170..181960- (Clytia hemisphaerica)
ATAGATTCGTACTCTAGAATCCAGTCGTATTGAATTAAAATATATCAATT
TATCATCCGTATTTGATTGGTGAAAAAAAAAATTGTATTTCCAAAAATAA
ACACTTTCAACTAAAGAAAAGAGAAATAATATTTTCATCTGAAGAAGTTC
AGATTAAAAGTTTTTACGGTCATATTCTCATGATATAATATACAGTCACT
ACAAAGGTAAAAAAGAAATGGCAGAAGCATTTGATCAAATTCCACAAGCT
GATCGCGGATACGATTTCGACCTAGTAAAGAAAGAACAAGGAATTAATTT
CCAATGCTCCATTTGTCATTTAATCTTGCGTGATCCTTACACGACACCGT
GTCATCACGCTTTCTGTCACGTTTGTATCACGCAATGGGGAAATGAATTA
ACAAATGCCAAAAGGTAAAAAGTTAAATTTTTGATATTAATTTTTTTTTC
TAACGCTATTTTGTTCATTCTGATGTAATTTACGCGAACAGTGTACTCTT
AGGTGCCAAATAAACGGGCACCCCGCTTGTTAATTTTTCGGACCTTATTA
GAACCCCCCGTTTATTAATTTTCANGCAGAAGCATTTGATCAAATTCCAC
AAGCTGATCGCGGATACGATTTCGACCTAGTAAAGAAAGAACAAGGAATT
AATTTCCAATGCTCCATTTGTCATTTAATCTTGCGTGATCCTTACACGAC
ACCGTGTCATCACGCTTTCTGTCACGTTTGTATCACGCAATGGGGAAATG
AATTAACAAATGCCAAAAGGTAAAAAGTTAAATCTTTTATATTAATTTTT
TTTCTAACGCTCTTATGTCCATTCTGATGTAATTTACGCGAACAGTGTAG
GAGCTTTTCGGGTAAAATAGATATATTCTAAAATATTTTTATAGTTTTTG
GTAAAATAGAAACAGTACATGCTTTTTCAAAATGTGTATTTCGACATGGT
GATAGAGAATGTAGGAAGAAAATCCGAAGAAATGATTACGATAGTATTAA
TATGATAACTTGATTTATCTTCTTAGGCCAACAACATGTCCAAATTGTAA
CAATGTTTATGACCAAAAGCAAGTGAGTAATAGTCTCAATATTCTTGCCA
TCGAAGCATTTTGTTAGGGGGGGCGTACGGTTTTTCGGTATTGCGGAAAT
CGACCCTTTTTTCTTCGGAAATTCGGAAATCAGGCAAAATTCCTTCGGTA
TTTCGGAGTTTTGAAATTGTTTCGGTATCGGAAATCCATGAATTTTAGCT
TCGAAATTTCGGTATTGTAAAGTTTTTATCCCTTTTTTTCGGAATTTTGG
GAAATTTGATGAAAAATTAGTCAAAAAGAGGAAAAATACCCAAAAAATTG
GTATCGGAATTGCAAGTATTTTTTTACGGAATTTCGGAAATTTTGGCAAA
ATTATTCGGTATTACGGAAATCGCGAACCCCGTACGCCCCCCCCTTTTGT
TCTTGTGTAGTTTGTTCTTATAAAACACGCGAAGCAGTCATAAAAATTAT
TTATGGAATTGGATGAAAGATAAATTGAAAATTATTTTATAGATTCACCA
AGATGGATTCATAGATCGAATGGTGAAAACCAGTTTAGATGTGAAATGTA
AACTACACGAAGTTGGATGTTCATGGCAAGGGAAAATCATTGACTATCAG
GTCTGCGTTCTTTGACCGGGGGGGGGGGCACTCAAGGTAATCGACCGACC
GTACGTGCAGCCCTTAAGAGTCCTTTTTCCAATAGCGTTGTGGGTCAACC
AAAACCGGGAGGCAATTTTTTATTCGTTGTTAGGATTTTGACGCCTACTT
TAAAAATAAAATATATTTGTAAAAATTACGCGAGCAGAGCGAGGACGAAA
ATCTTTTGGTATATTTTCTATTTTGGCTGTAAACTGTTAATTCTAAGGTG
TAAAAAAGAAAAGGGGCGCCGAAATTAGTAGTGTCAAAGGCGCTTTTTTG
CATCTCTTGTCTTCGGGCCCCCCCCCCCCCCCCCCCCAAAAAAGATCGGC
CACCATGCTACTGTTTGTTAAATAAAAAGCAATTTATATTTAAGGGAGCT
CGTAAACATGAATGGAAAGAGGAAGTAACAATGAAGGAAAATTTGTTCCA
GCCGGTATATAATAATTTTTGCTATTTTCTTTAGGATCATCAAAGGACTT
GTGAATATGAGACAATACCGTGTGAAAACGAAGGTTGTTTGGAAATGCAG
ATGAGAAAAAATTTACCGAAACATCAACAGATTTGTGAATATCGCCTTAC
ACAGTGTGGATACTGCGAACTGAAAAACCCAATCATCCAGATGAAGGTTC
GCAAAACAGGCTTTATTTCGGACGGTTGAAGTAGAGAATTTGTGAGCTGA
GCAAGTCGAAATGTGAGAAAGTGCACTCTAAGGGTGGGAAAAGTGAGAAA
AACGAAGATTTCTGGGAAAAAAAATTGGAAAATCTGACTATTTTTGCCTT
AAAACGGACAAAGATTTTCAAAAAAATGGTCGGTTTTTCACTCACATTTA
CTCAAATTTGGCTAAATATTTTCTGCACTGTAAGCGTCCGATTTTAATTT
CGGGAGATTGAACAAAGACTTTGTACGATATCAATTTGTTATAAATTCAA
ACTCTGTGAGATGAAGAATGTAATGTAATTGAATTTTATTTCATCAAAAT
ATATGTTATTACACCCGTCTCATAGCCTGGGAGGAACTTCCTTCCCCAGT
GGCTGTGGAAATTTTTATCAAAATCCCTATGGGAATAGAAATTTTATTAC
TCCAAGGTCAAAAAGTCCAGTGTGGATGGTTTTGGAGCACAATTCTTTTC
CATTGAATATCAAATAGGAATAAAAACGTCAATTTCCCAATGTGGCTTAA
ATTGTGGACTATTTTTCCAACCGAGAGCAAAATCTTTGCCATACTTTCCA
GTAGAAGTCCCAACGGGTCTGTGACACACAGGGGTGTGATGCTTTTCGAA
CACACTGTGTATTAGCCTTCAGACAATTGACTAATGATTTTTGAAACGAA
ATTTTCAGTACCACCACAAAGAATGCCCAATGATGAAAGTGATCTGTTTG
AACGAAGAATGCAATGTTCAAGTCCTTCGCAAAGATGTAAGTGTTGTTCA
TTGTGTCATGTTAAATTCGAATTTTGTCACCATAATAATAATTCGTTCAT
TTATTCATGTATTCTTTCATTCATTCATTCAAACTGAAATTTCCATTTAG
ATCGAAGGTCATTTGTCTCGAGATTGCCTTTATGAAGTGGTTGGATGCGA
CTACTTCGACCTCGGTTGTCTAAAAAAAGTAAGACAACACTGAAATGTCT
GCTAACAGCGTTGGCAAATAAAGACTAATGAAGGAAGGTGGATTATAGAG
TAGACTTGAGTACGAAACACAGTAACATGGATGTTATCTTATCATTGCGA
TAACTCTTACGGGATAATGCTAGTTAGACTATTAGAATATTCGCCTACGA
TGCTTCAGCTAACGCTTGCCTTATCTCTGGTTTAGGTGGCCCACTTTTCG
CCCCGTCTTTTCTAATTTTGAAATAAAGTGGGCAGAAAGTTTTGGCTATC
TAAAGTCAATGTATTGCCTTCTGTTGACGTCAATTCAACGATTTTTTTTT
CAAGCAAAGATTTCAGTACGCTCGCTTAAGGCCGGTCTCCACTTTCGCGC
GAAATGGGCGACAGTTTTTTTCTTAACCTTTTTTGCCTGAAGAAAAGATC
ACGTCATAAAAAAGTTTCAAGCGAAGAAAAAAAAAGTTGAAGGAAGTTCT
TCGTTTTTCATCCGTTACCTTCATTTTTCAACCGACCAATGACCTTNNNN
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TTTTATTTTTCCTCCAATTTAGCGCGCCTTTACAAAGTTTTTCCTCTAAT
TATTAGTACGATAAAAAGATTCCAGATTCAGAGCAATTTATATCCTCCTA
TTATTAGTGCGACACCTCCAAAATAATTATTTTTTTGGTCGTATTAAATT
AGAGAAATTACGGTATATCAGTCTACAAAATAGTTAGTTATATTTAATTT
TCCCAAATTTCTCACTGTTTTCAGATACAGCGCTGCAAAATGGAGGAACA
TCTCAAGGAAAACATTGTTGAACATCAATTGATGATGCTGAAAGATTACA
AAGTAACCAAAGAAAAGCTGATTGAAACTAACAATGATTTAAAACAAGAA
AAACTTAAAAATGAAGAGCTTACTGCAAAATTGGAGACGGCAAATGAAAA
AATGGAACAATTGGAATATAGAATGGAATTTATATCCGAAA

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00023478	TCONS_00023478	Clytia hemisphaerica	transcript
TCONS_00023477	TCONS_00023477	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00023477-protein	TCONS_00023477-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000454	supercontig	sc0000454:175170..181960 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.2	0.08	0	0.13	0.09	0.08	0.35	0.33	0.58	0.21	0.97	0.21	4.52	5.12	1.4	1.63	0.57	0.58	4.16	8.4	1.39	0.73	0.63	1.31	2.45	3.79	0.19	0.5	0	0.08

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XLOC_013196 (gene) - C. hemisphaerica