XLOC_013211 (gene) - C. hemisphaerica

Overview
NameXLOC_013211
Unique NameXLOC_013211
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000455:300183..307382+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013211 ID=XLOC_013211|Name=XLOC_013211|organism=Clytia hemisphaerica|type=gene|length=7200bp|location=Sequence derived from alignment at sc0000455:300183..307382+ (Clytia hemisphaerica)
GTGGTGTTACCAAGACAATCAATCGATAAtttaaattgacgtcaaataaa aattcgattttcgtGAAGTACGGATGTGCACAAAGAAACATAGTAAGAAG aaaagatttattttgcaaCCAATTCCTTCGCACTTTGCAACTAAAGGAga ataaaaatttttactttttacatattacataaaaaattatttggatGTTA ATACGCTACTACGCTTCATACTTTCGGACACAGTTAAAGCAGAGTTTTTC ACCAGACAATAAATAATGAGTCGTTCTGCGAGAGCGCGAAAGAAAAAGGC GAACGAAGCAGAGACGGAGATGGTAGAATTCATAAAAGGtatgtttttaa gttttaataTATGGTTTACACATTGCGTGATGGTATAGTGGTTGTCATCC TTAACTCCAGCCTTGGATGCCCGAGTTCGATACCTACCGTGTCAGTACGA TTCACTTTGCAAGTGAACATACCTTCACCTGGGTCAACCCATTCCATGta aggggaattgggtaccattactctgatgCAAGAGTGTGGGTAGACTAGAC AGACATTGTGAAGTACCGTGCATAAGGTTCGGCTTCGCATGAGCAACCTT CTACCAGTGTTCGTTCGAGTGACgtggtatacgccatggcttgaCTCCTC ACGTTTCTCAGGTTGCAGTGTCTGTCAGCAACGTGATTCTTACTCGGGAG TAAGACCCATCCTGAATGCATTCAGAGGGCACATATCTGTCCATCTATAG TTTAAACATTTGGGTTTTCCGTTGATTCACCGTGCCTCGTGGGAGCTTTC ATCATGTCTACAAAAGTACATACGAACTATCAGCCccaaaggcggcgggc gtttgatAGAATAGGAGAATTaacaaaagttggtgagaggttGCTTATGA ACCGTAGGGCTTTAATCCTACACCTACTTAACTGTAGGCTCACTTTTCct gcgtgataccgttccagcccgactgatGAGCTTGTCTAGTGCAATCAGTA ATATCAAAAAGCGATTTAAAAAAGTAGTTTTATACAGGTTAGTCAATACA TATAAAATTCATAGTTCCCGTTAAATACAATTAGCATATTCAAAATCTTT GTATTAATTTTCTCCAAAGGTCAACCCTTAAAAACACGAAATGGTAGCAA AGAGGAGAGGGTATTAACCGAGAAACAAAAACATGAACTACATCGACATG ACGTGTACCTTCTTCATGAGAAAGTTtatgaaatggatttatttcGTCAA CATTTTTATGAACATAACAAAAAATTTGTTGAGACAATCAAAAAAGATTA TACATCGATTGAGTCCTTTCAAGCTACACAACAAATCGAGAAAGCGATGG AACTTATCTTGGAAAGGTATGtcttttttataatctttgaaaaaagatgt gaaagaagCTAACAGTTAAGCTTCTCTTCAATCAATACGGtgtaaatttg tttttttaacgGCTGTCAGAGTTTGATGGTGGTCCAAGCTTGGTATTACA TCAAATACTAAACTTATTCGTGAATATTTATGACATAATATTTTATACGA AAGCACCCAAAAATGACCGGGTGTTTGCCGCATTTATTTTGATAAAGACT TAGTAATAATGGCAAACGACCGGGCTATTTTGAGTGCTTTCGCATGAAAC ATCGCGTCATGAATTCCAAATTTTTTAGACATATTGAAGTCGACGACTAC ATCAAATGCCAAGCATTAGACGTAAAAACAGCTATCAAAGCATTACGTAA TGTCTGGACAGCCAATAAACAAATTAACCCAAATGAAATATCACACCTTG GtcaattatttcaattattatCGAAATTCGAATACTTACGTAGTAAACAA CTACAAAAAGAGGAAGAAGAGGATAAAGGGACTCCAGAAAGtggattgaa aacaaaaattgtgGAGCCAAAAAAAAATAAGGCCTTTGTCGATGAAGAAG AAGCAGACACTTCAAAGATGGTAAAGAAGAAATATACCGACGCTTATAAA AGGTATGGGATTTATATATGCGTAGCGAAATACCTGCAAAacttatgagg gagtgcagacgtttatgacatattcctgatcttttgataaaacaaagaca ataattacagtgtcgtaaaaaccgctctcgttcataaattttgcagggta tctcgctacgcctatgctgATTCACGAAGTACAGTAAACAATCCTTTATT CGATTTTCTATTAAAGTAAATTTTCTAATTCAAGCGCACCAAAACGCGTT aataatacactcttctcgagatgcataaatttattgttgtcctcgttttc aaacagatttcattgctatgagattatacatttaaaccaatttaaattcc cgaaaggcaaacattaactctaaaacaaaagtacttgaaattcaaaatgt ctcatgaggtgtaaacaacacaNccaaacattaactctaaaacaaaagta cttgaaatcaaaatgtctcatgaggtgtaaacaacacaattatcatcgtg aatatgtaattttatagcaatgaaatctgattgaaaacgaggacaacaat gaatttatgcatctcgagaagagtgtattaggGGAACATTAAATTGGAAG CGCTAAATTGGAggtaaaaatctttatttgggtCAGGGTTGTACAATATA TAATGCATAGTGTatcccggctcgaaccaccaaagtAATTTGTCAGTAAT TATAAGCAAGACACGCTTGCATTGTGCTGTTGAGCCGGTGCAAAAActct aaatttgaaaatatttataaaagaCACTACTATACCACGCGTAATAATTA GAATTAAATTGATCTGGCNTGTGCTGTTGAGCCGgtgcaaaaaatattta taaaagaCACTACTACCACGCGTAATAATTAGAATTAAATTGATCTGGCA AAATTTCGGCTGCGCGTTGTGAATAAGAGTAACATTAATTACAAATTTTC GCTAAAAACAGGGTACGTGTTAAATTAGAGTGCGCGTTAAATCAAAGACT TTAGTCtcttaaacatttttcaaaaaagtctctctaatggTCACCTTCTC AGCAAAAATAAGCCTCTCTAAAGGCCATTTTTTAGAGGTCCCATCTGCAC ATACCTCTTATCCGCCAACCTTGAggtgccacccttaagggtgcctttct GAAATTTGGATCTCCCTGTAAAGAAATGAAAGTTGCATGGGCGGCACACA CCTCAGCTCACAACCCTAGTACCATCACTGGGTAAATGTTGTTTAGGTGG ATCCGATCCGTTTTTATTTGCTATAGACCTAGAAGATCAAATGTTGAGGT TATGAAATCTTCCACTTTGATTATCAGATTAAATCCAATTTGTTGTTTGG AGATTGAACTCACACTTGTTAGTGTTTAAATGACTTGATTGTGACCAATT ACACCAGAATTCTCTGAAATGGCTTTCAATAATTTAGGTTCAAATGACTA TTTAACAATAATTTTTCTTATCCAAAGATTCAACACATTATGCGATTACA TCTCAATGCAAGATGGTCTTATCTTGGAATGTATTGACTTAGTGGAAGGA GCACCTATTGCCATGCCAACACTATCACCAAGGACAATACAGGATGCATC AGATTCATCTCATGCTGCTGGTAACACTGCAATGGATACAGGATCTCAAC TTGCAAAAATTGAGTCTGCAAATGTCATATGTCAATTGCAAAAGGTATGT tgattttgacttgaaattgtACTTTTTGTTAAGCTATCTAGGAggcgttt attaggcacctgggACACTAGGAGTTCTAGCCCCGGGGAgcgggtactta ggcaaaatgggtgctaggtatgtgcgagccatgaGGGttcctttttcaca ccctcgaaaaTCGCTCAAAGGATTACAAAACCATTACAAAGCAATTAAGT CTATTCCCATGAgttccaaaattacaaaaaccttaAATCGATTTCCTCAA AGaatcataaattcttgaaatttggactaaaatttgaaaatttctcctgA AATTTTGGGTAAATATTCTCTCTAAGGTTGGCAAAAACTACAAACGATgg acaaaatgttcaaaattctGTCTCTTTatataagggtcgatttttgatTG GCTCGGGCATatacatacccgtcatctcTCAAAGTATCATCCCGCGGGGT TTTAACCTCATCAAGGTTAAACTTGACATGTCCCTATCTGGTTTGAATAC GTGGCGTAGTTACTTATCTGATCTTTGGAACTTTCATTTAATACGTTCTA ATCCCACTGGTGGTGATATTTCGGAGTCTTTCCAAAGTCACACAATAACT TAAAAGACCTTGGAAAATAAAAGTCTTACAAAtcagaaagataaaaaatc ctttaaaaCGAATAATACCATGTTAAGACATTTCGGTGTGTTTTGCTTTG GCCTTTTGTGTTTAAGTGTCTTTTATATGTTTTTGTATATCTACACAAGT tcacactacacaatatatatatatagtatcaGAGTATAGAGGcaaatggt ttgttttggtccTAATTCGGAATAAGCATTCacaggcacgacgcaacggg tacggaAGCCGCAGTaccagattttcaaaaaagaaaaacccaTTGTCCGC TTCGTTGGTAAAATTGctaatcgcttaaatttcctcattcgccgtaccag atataaaaagcttccgtcgtgcttGATTCATGAAGTCGGAGAAAGGGTCT TTAATTTAATAAACCAATCTAAATAacatttaataatttttttcttttct gcatAGAAGAGTGTTGTTAAATTCAATCTCGACTTGTCCAATGATGAATC ACCTCAAAAGTCACGTGAACATGGAATGCACCAATCACGACCCGGCTCCA CAAGTCCAGTTCAAGCATCCCTGGGTCCAGTTAAATCAAAACCTAGATTA AAGAAACTTCCTTCAGGAATTCAAAGAAAGGTTTCAACAACGAAGAGTAA GCCAAATTTAACCAGTGCAACATCGATCCATTCTAGAGAATCTACATTGA TTAAAAAGAAAGTTTCCACAATTAGATGTAAACCGAATTTAACAGAAACG AAATCAAGAGATTGTGAATCGTTTTCGTCACCAAAGGAAATCTTATCAAA ACCTTTACCTAGTAGTGCTCGAAAGTTCACTAAAGATATTCCAAACAATT TGATATCCTCTAAAAGTAATCAAGACGGAATAGCAGGTTCAAGAAGTTCT AAAATTCCAGTTCGAATTTCAACAGTTATCAGTGACAGAGTCATATCACC AAAGGATTCTACGGAGCCAATCTGTCGACCACTATCCTCCCCTGCATTGG AGTTTCATCAAATTCATAACAAAGAATTCTTGAATAAAACAAGAAGAAGT TTATTAGAAATCTCACCGAGCAACGCCAATGCTACCAAGAATGAACTAAT GAATGAAACTCCTGGACATGACGCATCTTACATCCcttttttaccaattt tcaaGGTAAGAACGAAATTTAACTTTGTTTCCAGCCTtctaatcaaaatt ttctttcgtttcaaaacttttccatcttTAGAAAACAATGATAGCTTAGT GGGAGCACCTACCAACTGGAAAATTTAACTACAAAAGAAATGTTTATCTC CCACTgtgggaagaagttccaccggggctgtgagataggggtgtGATGAG TAATAGTTATCCAGAACAATCTTTAAAGTAAAACTACAAAGGTTTAAAGA ATGGTTGCAAACTTATTGTATCGTACTCTAGACTAAAGCTTTTTACAGAC TAGTGAGTTACCGAGTGAGGCAATTCGGAATACCAAACTTCGAAAAGTGA TATCCCAAAGCTATTAAAAAGGGAATGTTCAAATGAGATTGTATCATGTT CTATGAGAATTTTGGCTTGGAGAACAGAATTTATTTATAAATATGTATTT ACTTTAAAACATAATTTTAGGGTCCAGCTACATGCCAGACAATTGGAATC TCGAAATTAAAGCCAATTGTAAACCAACAAACTGACTCTCAACTGGAAAC CGATTCATTAAAACCATCAGACACATCTGTAGAAGACAGTCAAACAGACA GAAACCCTAAAAAAGTATTCATGGAAAAAATGCCAAGATATGAGAGCATC CATTCCTCAGGTTACGGTTCTAGCTTACCAAAACAACGACCTGTGTTACC AAAAATCCCTCATACTGGTAACACAGAAAACCAACTTGAAGAGCCGGCTT ACAACCATGCCCCACTCCGTGGCAttttaaaacaatcaaaaatcaGTAAA GATGTTTTACAGTTATCGGACCCAACAGTTCGGCCACGTCGTGCTTCGAC AGTTCATCGCCAGGTTATACAACCTAATATTGTCTCAATGGCACCACCTA CACATTCATATCAACCTAACAAGAAATTGACAAAATTACCACAAATCCCT CGCCGTCTTAAAGGTGTTGCAATTGGTACGCCCCCAAAGATCCCGCACCC GCCATCAGATCCAAAACCTAAGAGGCAAGGATCAAACCACCGGCGTGACA TTCAAGCGTCAAACACGCGTCTTGGGCCGATACAATCGTCAACTATCTCA CGCGGTTCATTACACCCATCCGTCCGCCCGAAAGGTTTTCACCCTCCAAC ACAGTCCGACCCACAACGTTTTGGGGCCTTAAAAGACGGCTTCCAACACA ACATCACCTACTTCCATAACCCTCGtaattttcaataagttttgttttta acatgttaGGATCTATAAgctataaatttatttttgaaacttaaAATAGT CTTTTCCCACTcattaaaaatctattttttctgtaaacaatATCTGAGTC AACAACAAAAACAGCTTCTAGATCCTAACTATAATTAGGTGTATGTTAAG GAAGAATAAATCGATTTTCTGGCTCAGAACGAAGGATTAAGCCAATAAAT GATTAAGAGCCCCATGAAATTAAGGGCGTATCTAAAAGAAGGATTTCTAC AAGGGTACCCAGGAGGAGAATATTGTGAGTATAGATATAACATCATAAAT CAGCCCTCGTGTTACTCACGCCCGTTCTGGTTCCTACCCTGGGTGTTTTG TATGTTAATATTTTCTTAGAAGCATGTCAAAAGAGAATCGACTCTTTCAA CCTTATGTATATATACCATACTGTATaaaatttcatctattttttttcat tgtaaataaaattcttaaaagaaaatcatATTGTCCTCCCTGTTCATTGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00023508TCONS_00023508Clytia hemisphaericatranscript
TCONS_00023509TCONS_00023509Clytia hemisphaericatranscript
TCONS_00023510TCONS_00023510Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00023508-proteinTCONS_00023508-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000455supercontigsc0000455:300183..307382 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.16 0.05 0.05 0.02 4.28 2.78 4.02 5.36 2.3 2.94 1.81 1.72 0.73 1.8 0.07 0.05 0.18 0.18 0.01 0.05 0.07 0.16 0.05 0.07 9.47 9.14 0.08 0.02 0.31 0.26