XLOC_013380 (gene) - C. hemisphaerica

Overview
NameXLOC_013380
Unique NameXLOC_013380
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000462:22414..29196-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013380 ID=XLOC_013380|Name=XLOC_013380|organism=Clytia hemisphaerica|type=gene|length=6783bp|location=Sequence derived from alignment at sc0000462:22414..29196- (Clytia hemisphaerica)
AAAAAATCCGTCTATAATCTCAGATCCTTTTTTTATCAGATTGAACGCTG
GTGGAAGGAGTTGCATGAGAAACTAGAAGAATATTATAAAGACCAATTAA
GAACCATGAAAGACAACCTTATGTACGATCCAAAAAACGAATTACACAGG
TAAGGTATTACAGTATTTCAAAAAAGAAAGAAAACTGGCAGTCGCCTCAT
TTTGATATCCTTTGGCAAGATCTGCGTACGCGGGACGTAAATTTGTATAT
GTTCAGAAAAATGTCCCCAAAACTGTTACCTCCAACGAAAAATGTCGAGT
TTGCTCTGTATTGAAGAATGGCACCTGTTTAGCCAGCGAAAAGAAGCATT
TACCTCGTAAATTTTATTGAAAATTAAATTTAGTAAAACTTTGGTTCTGA
TTTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNGTAAAATTGAATAAGATTGGAACATTTTTCT
TGATGCCACACAAGAAAACAGTCACTTCTGGATCTGTCGCTGTTAACAAA
ACAACGGTCAGTGACAATGGAACGTGGTACCATGAAGTCGGGTAGCTTGC
ATCAGTGGAGGCAAACATGCATACCCTCAAATGAATGACCTGTCTGGTCA
TTAAAATACAAAGTTAAATCAAAACAAAAATGGTANNNNNNNNNNNNNNN
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NNNNNNNNNCGTTTGACGATTGGTGGCTTGATTTTTCAAACTCGATACAA
AATTATTTCAAGTAAGCTGATTTTGAAATTATGTTAATGGAGACTAAAAT
GCAGCTTGTGTGTAAATTTGAACAAGATTGGGTCTTTTTTCACGATTCTA
CGCATATTAAATAAATTTCTGGATCTGTCGCATTAAACGGTCGCTTGATT
TTTCAAACTCTTTCACCGTTTAGTTTTAAAGATCATTTTTCTGGTTTACG
GTCTGATCCAACTAACATATGCCTACAGGGATATTTCTCCCTACATGTGA
GTGCACCTACCTTAAGGGAAGAAATTTTCGCGAGAAGAAATTTTCGCGGA
ATTTAATTTCGCGAATCAGAGTTTCAAAATGGCAAATTTCGCGGAATTTA
ATTTCGCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTCGCGAATGAGCCG
ATTTCAAAAGTTTCACGGAATTTAATTTCGCGATTAAGAAGAAGTTATCA
ACTTAAATTAACTTTTAACCACCACGGAGTTATTTATATTTGTTTATATT
TGATAAGAAATACACGTTATAATGCTTAAAAATCAATTGTGTCCATGTTT
TTTGGTAATACCTGGTCAAAAACAACAAAATAAAAGAAGAAGAAAAAAAA
TGGAATTTCGCGGAATTTAATTTCGCGATTTAACAATTTTGGTGTGTTTC
GCGGAATTTAATTTCTTCCGCGAAAATTTCTTCTCGCGAAAATTTCTTCT
CTTAAGGGCCATTGGGGACGATATTTTAGCTAATTTTTCCAGTGGGAAGG
GTTCCCAGTGTGTCTGTCAGAAGGAGATATAATCTGCATTTCCGTGAATA
CACTCTTTTGTTATAAGAACCAGTAAATATCTCGGCTTTATTATCGGCAA
TTTGAGCCTAAAATTTGTTTTTAAATCTATTATATCTTGTCCTTATTTAG
CCACAAAAGAATGGATGCAAAGGGATTGGTCGTAAGTTGGGTTATCAACA
TTGAATTCAAAGCCCCATAGGGTCTAGAGAGTAATTTTCAGCCTTTCTTA
GGCAAGAAAACGTGTAAACTATGCTATAGTCTAAGACGAATCACTATCTA
AGAAAAAAGCCCAAAGCCGAAGAAAATTCGCAAACGGTTTTTTTTGCCGA
AAAGAGTTTACAGTGGGTAGAGTNNNNNNNNNNNNNNNNNNNNNNNNNNN
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TGCTGAATGAAATTTTCGATAAATGCTCAGAATGGTCTGATGGTTGTTTA
CCTTGTGGCATTCAAACTTCATGGTACATTGTGATAATTTGATTGGAGTA
ACCGTTCCTATTACATCAATTGATCTCAGCGAAAACTATTTTTATGGCTT
GATCAAACCAAACCAAACAGCAGCAGTCAAGTCAGATTTAAAACAACATT
TGGATTTTATAATTTTATTGGAAATGTTATCGTTAAATTTTACACTCAGC
GGGCATTGTTGCCAAACAATGATTTTTTTGTCACGTTGTCGTTGTTTAAC
AATTTGAGTAAACGCTTTTACAAAGAACATTAATATTAGGTGATTGTATG
TGGTCAGTAATATTCGTTGAATATAGTATTGAGGCGAGGAGGTACGATGT
GAAGAACAGACACAATATTTTCAGGAGTTTTTAATCAGTCTACATAAAAT
TAGAAGGACTTTGTTGTGGTTTGAGATCAAGCAAACATTACGCGATTCCC
ATCATCCAGGTTCGATAAAATACAATTCGATACCTTGAAAACAGCTCTGG
CCGAAACATGTTGGAAATTTGTAGCATATAATGGTCAGATAGTATTTTTT
TCTCGATCCTCGTCCAATATATACAATTTCGATATACAATAATGTACGTA
TAATGCAACACAAGAAAGGGGTAAAATGAATGCAATAATTGCTGCCTTAC
TACAATCTAATAATGTTTCAAGAGGTTTATATACAAGAGATGGGTAAAAG
TCATTGCAAGATTTGTTTTTTCGATTGCATGAATTGGATGAATGTACGAA
AACTAGAAAATGTACTGAATTATAAATTATTGATATTTTTGTGAAAATGG
AATCTATTTTTTGCTGTTATTAGTTAGGACATCCTAATTATCAAAAGCTA
TTTTCTTGATCACGATTTCACCTTGAATATTCAAAAACTGCAACAGCAAA
ACAATGAAAAGAAAGACTACACTTTCAATAACACATCAGTGTATTATTGT
TTTTATGCTGCAGTTTTTCCTTAATAATTCAACATGACCTCGTGATTAAG
AGAGGGTCTTTTTTCACAGGATACACGTTTTTTTTTTTATAAGAACGTCA
AAAATTTTCGAAGCCTTCGGATGTTCTTAGTTTTTTGGATTTGAAGCCTA
AAAATGTTCTTGAAATGTTCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCAAAGCCTTAGAATGT
TCTTAGAATGTTCTTAAATTTTTGGGCCTCGAAGCCTTATGTTCTTATAT
AGTTTGTTCTTATAAAAAAAAAAACGTGTACGTATGTTGAGAATCTTGTT
GTAGATACTTTTTTTAAGACACACCAAATTATTTTTAGTTCAAAAGCCTT
GTATAGAATACTCTCTGTAACACCCCTAAGTCCAATATGAGCTATGATGC
TAGTTTTTAGAGTTTTAGTTTTTATTTTTGATATTATTTTTTGTTATTTT
ACCCTGTGGAAAGTGTATTGAGCAGATATTTTTGTAATTTTGATCAGCAA
GATTTTTTAAAGCTGATATAAAAGTATCACAAAATCGAGTACAAATGACT
TTTCAAATACCCCCAGGTGCTTTTGGAAAACCTCTGTTCTCTAATTTTTC
AAACATTCCCAGTGGCAATAAATTCAACGTGAATTGTAAGGTCCTATTAG
TTTTTCTTTTTTTTGTAATTCTGCATTAATAATGGATTAGTACATTTTGA
GATTTCTTCGCTTTGCGAAAACAGAACGCTCGTTCCGCAAGCCCTTTTAT
GTTGATTTATCATCTTATTCACTATACTGTATGAAGAATTTATATATGTA
GTTTTTGTTGAAATTATGTCCAGGCAAATGCGACATTCAAAACTAAAATT
AAAATGACATCCAAAACGTAAAATTAGAATTTCTTTCTCTAAGCAACATG
TTTTCTTTTTTCAGGGAAATTCTTGCGTATGTTATGGTACCAATAATTCA
ATATCAAGTGGATGTATTTGTTGAGTTGTGGAATAATCATCGGATTCGTA
AACAAAAATAAACGTATTTGCCTACCGGAAAACCCTCTCATATTTACAGT
TTTTCAGAGAATTGGGGTCTTCACGAGTGTGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00023816TCONS_00023816Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000462supercontigsc0000462:22414..29196 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.33	0	0.74	0	0.88	1.39	0.42	0	0.27	0	2.31	1.3	0.65	0.22	0.18	0.79	1.47	0.25	0.69	1.45	0	0	0.37	0.34	0	0.94	0.45	0	0.36	0