XLOC_013697 (gene) - C. hemisphaerica

Overview
NameXLOC_013697
Unique NameXLOC_013697
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000491:51610..61548-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013697 ID=XLOC_013697|Name=XLOC_013697|organism=Clytia hemisphaerica|type=gene|length=9939bp|location=Sequence derived from alignment at sc0000491:51610..61548- (Clytia hemisphaerica)
TGAAAAAATGTAACTCAGGAGCGATACCAGAGTGCAAAAATACATAACTT
GTTTCGACTGCTCTGTTCTGTATAATTGTGAGCTTGATAAACAATAATGA
TCATATAGCAATTTTAGATATTCTCTCTCTAAAACATGCTGATGTATTGC
AGAAATCATCTATCACGGTTAAAACTGTCAAATAAAGTTATAATTTCTTC
ATCTCAATGCGGATGTTCCACTCAAGTCTCCCCACCTTTAAAGAAGAAAC
GAAAACTAATATACGCTAAGGGTTGGTATTTACCATGTAGTTTATTTTCT
ATTGTCTAAATAATAACTGTAAGTTGGTCTAATATCGACATCCCTCCTCT
AATTCCGACACCCTTCTTTAGAGACAGGAATAATATGAAAGCTTTTGAAT
CACTGATTGAAAAAGGATTATTCCTCTCAGACCACTAAGCAAAGTAAAAC
AGTTTTAACCTTACTATCAATTTCAGGTGATAAAAAGGGTGTCGGAATTA
GGGGAGGGGTGTCGACATTAGACTAAGTTACGGAGGTATATAAGCTAATT
TATTGTATGTTCTGTGATTGAAAACCTTGGTTTGAAAACTATAATGAGAA
TGCAACCTTTCCTTAATCCTAATTGGTTGATCACAAATTCCATTGCATTT
TTCATTTTGCCAGGTAAAACATTTGTAGATTGGAAGCGTATCTATATCAA
GTCGGGTAATGGTTCAGCCTCATTTTTTCATTCAAGGTATGTATAACGTA
TTCCTATTTGAATCAAGACATTCTTATATAGAAAAACAATACACAAAAAC
AATAACATTATATAAAAGATGTGCACTAGAAAGGTGTCATCAGCGTTTTT
TGGAGCTCTTTGNCTCTATGTCTCTCCTTTCACTTTCTTCCTTCCGTTTT
TGTTCTTCGGCAGATTTTATATCTTCTTTTTGCTTCTTGGTAATCTTGGC
GTATGTTTTCTTTGATGTTTCCTTTATTATTTCTGCTGTGTGCTTTATTT
CCTCCTTTATCATGCTTCTTGTCTTTTCCTCCATCTCTTGTAGTTTTCCT
GCCAGAAAGGTTTTTAGGTCATATACCTCATTGTTCAGTTTTTGTATGAC
GTCGTCTTTCTTTTGAAGTTCATTTTGCATCATATGTTGAGTGTTTTTCC
CTACTTTATTTCTTAGGTTTTTCGTTATTCGTACGCAGTTTGAACATAAG
TAATGATCGTTGTAGGATGTCACGAATATTTGTAGTTGATACAGGGGTAA
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NNNNTGTTGTTTTCATGAATTTTGATGTTTTTATTTGTTTTCAGCCATTT
TTTCGAAGAGCGTTGCAAAAGCGTCTGATCTAGTTGACGTCAAATAAAAA
CTGATCTTAGTAACTGATCAAAGTCAGTTGCTTAAAAAAACTCTACCTTT
TCCGTTATAAATCTTTCAAAGCAAGCGATTAATTCTTTCTTTCCAAATGC
AAGCAATGGGAGTTACAATGGGGATCTTCCTTTTTAAAGGGATGGGAGGA
GAGAAAAAGAAATCAAATTTAATTGTTGCATGGTAGTTCTTAATTCTTTT
TTTCGAAGTTGATTACAAATAAACTGAATGTGCATTAAGAAACTTGAACA
AAAGACAGAATTTCGACAAACAGAGAGCTAAGGTAACTCAATAGCAAACT
AGATTTCGGAAAGGGCTAGCTTGTTTTTACCGAGTTTGTTATTTATTGCT
CTTTGTACCCACCTTCTAGCTGTTCTAATGTAAATGGTTTTGACAACACA
ACATTATTATTTTACCAAAAAAATCATGATCGATTCTATTTTTTTGTAGG
ACGAGTTTAGCTACAATATATAGACTCAATGTATCTTTTCCTCTCCTGTT
TACTTTCTACTTACATGAAAAAATGTAACTCAGGAGCGACACCAGAGTGC
AAAAATACATAACCTGTTGAGACTTCTCTGTTCTGTATGATTATGAGCTT
GATAAACAATAATGATCGTAAAACAATTTTAGATATTCTCTTTCTAAAAC
ATGCTGATGTATTGCAGAAATCATCTATCACGGTTAAAACTCTCAAATAA
AGTTATAATTTCTTCACCTCAATGCGGATGTTCCACTGAAGTCTCCCCAC
CTTTAAAGAAGAAACGAAAACTAATATACGCTAAGGGTTGGTATTTATGA
TGTAGTTTATTTTCTATTGTCTAAATAATAACTGTAAGTTGGTCTAATAT
CGACATCCCTCCTTTAATTCCGACACCCTTCTTTAGAGACAGGAATAATA
TGAAAGCTTGAATCACTGATTGAAAAAGGATTATTCCTCTCAGACCACTA
AGCAAAGAAAAACAGTTTTAACCTTTCTATCAATTTCAGGTGATAAAAAG
GGTGTCGGAATTAGAGGAGGGGTGTCGACATTAAGTTACGTAAGTATAAA
GCTAATTTATTGTATGTTCTGTGATTGAAGACCTTGGTTTGAAAACTATA
ATGAGAATGCAACCTTTCCTTAATCCTAATTTGTTGATTACAAATTCCAT
TGCATTTTTCATTTTGCCAGGTAAAACATTTGTAGATTGGAAGCGTATCT
ATATCAAGTCGGGTAATGGTGGGAATGGTTCAGCCTCATTTGTTCACTCA
AGGTATGTATAACGTATTCCTATTTGAATCGAGACATTCTTATATAGATA
TACACAAAAACAATAACATATCATATAAAAGATGTGCACTAGAAAGGTGT
CATCAGCGTTTTTTGGAGCTCTTTGTTTAAAAAGCAATTGAAATAACAAC
TTTGAATTTGAAGACCCCCTTTTTAAACAGCTGTTTGTAGTAAATTTTCC
AATTCTCACAAATCAAATATTATAACAGTGTCAAATGTCAAATGTCAAAT
CAAGTGTCAAATGGAGGGGTTGCCAGTTCAATTCCAAGCTAGGTTAAAAA
TTAGATAATCAGACCCTTGGACAAATGGGAAACGGGGCTAAACTTAAAAT
GTTTTTGCTTCTTTTTTATGAGAAAAAAGTGTAACCAAGATAACAATGAT
AGGTGTTTATTGCCTGGCACTAAGCACTCAAAAATATTTTGAATATCAAA
AGAGTGGACTGCGTGGATGAGTAGCAAGTCACCAAGCCTCTTCAAATGAA
TGTAACAACCTCCTTGAAAACAAAAGGAAAGGTCAATTATGGACCAATTC
TTTTAGAGAAAAAAATATCTTGATTTCTATTCTATTTTAATTAATTTGTT
AGCTCATTTTAGAAATTTAATAGGTCTTTGATCTCTCTGATCAGTCTGAA
TTCTAATTGAGAAAATTATATTAAAAAAGGAATATGTGAAATTCTTTCAT
TACGCCATTAGAGCTCAAAAAACACCAATGAGACCTTCCTATGTGCACAT
CTTAGGAATAGTTCAATTCAAATAAAAACGTTATATAATTATTTTTGAAT
TGAAACTAATGAAACATATGATTCTCATTTTACTCTTAAAATAATTATAA
ATGCTTTCTTGCAGTTTCTTAAAATATTTTTTTTTCAGTTGGTCCCTTTG
ATTGTGGTCTTTTTTCTAAAACGAAATTCATTGCTTCAAATTAGCTCATT
GAACAAATTTGATTTTTTCTTCATAAGGGACCATAAAGGGGGGCCAGATG
GTGGTGACGGAGGACGTGGAGCTGATGTCATTTTCATTGCTGATGATGCT
TACTCCCAACTTTCTCATCTGGAGCATCAATACCGTGCTAAGAATGGAGG
GAATGGTTCCAAGAAAAACAGGCATGGAAAGAATGGAGAACACATACATA
TACATGTAAGTGTGTTAATATGTTTTTATTGTTTTTATTAAATGGNAAAT
GGAGAACACATGCATATACAGGTAAGTGTGTCAATATATTTTCTTATTGA
TTAAGTGGAATGTCCTTGTTTATGTTTTTCTGTAGAAATAATTTTGAAAC
TACTTAAAAGCTACTTTGAAATATTTTTGTGGTCATGCTTCTCTAAATAT
TAAAATATTATAAGCAACATAAAATATAAACATTGTTCGAGACATGTCCT
GCACGTTTTTTTTATAAGGAACTTTAACTTGGCTCCAAGTCTGGATTTCC
TTATTTTTCCAGAGAATTTCAGCCTCAAAGTTCCTTAACGGGGCTCTTAT
TTACTAAGCTGCCAAGTTTGGATTAATAGGTTACTTTGTTAAACAATGGA
CTACAATACAGAAAAACGCGTTTTTCAACATTGTTTTGTCAATATTTATA
AACGTTTTGTTTAGATTTTTGTAAACGCGTACAAGTTCAAGTTTAACTTG
TACTGTTTCTTAACTTTTTTTCTTATTCTCAGCCTGAGCAGTTCCTTAAC
AATTCCTTGTTTTTTAAACCATTTTCAGCCTCAAGTTCCTTATAAACAAC
GTGTTCCTTATAAAACAAAGACAGCATGTGTGATTTTTAGATTTTAGATT
TTTGATTTGGGATATAGTTTTTTTTGTAACTATTTTTATGTGCCTTTCAA
CTGATCCAGTGACAACACTTTTTTGAATTCTTTACACTATTGAAACATCT
TTACATTTTTATTTTGGCTGCAGATCCCCGTGGGTACTGTGATTACGAAC
TCAAATAGTGACAAAGAACTAGCAGATTTAACGAGAAAGGGAGAAGCATA
TACAGTTGCCAAGGGTGGATCTAAAGGTAGGCACATCACATCTACTTTGG
AGCAAAATCGACTATAATTGCAAGGTCAATTTTCTTTCTTATTATGTTAT
TTCCATTGCATGACTTTGTAATAATTCTTCATTAATTTTAATGATTAATT
AATATAAATTAATCATAATTTTTAATTTAAGGCCTAGGGGGTAATCCAGA
AGAAAGCAACTTATTAATTAATCTTTTGTGATTCTTTTTTCTTTACGAGA
TGATAGCTGTGAATGAAATAGTTGTTTTGCATTTTTGGTAACTTTTAAAA
GGTCTTGGTAATGTCCATTTCAAGTCACCTACAAGAGTGCGCCCAAGAGA
GTTCACAGAGGGAGGAACAGGAGAAGAAATATTTGTAGAGTTGGAACTGA
AATCAATCGCTGATATTGGCTTGGTATGAGCATTTATTTGAATAGAGAAT
TAAAAATGACATCACTAGCCCCCTGTTGCAATGAAATTGCGTCAAAANTG
AAATCAATCGCTGATATTGGCTTGGTATGAGCATTTATTTGAATAGAGAA
TTAAAAATGACATCACTAGCCCCCTGTTGCAATGAAATTGCGCCAAAAAT
GATTTTTTTTTGTCCAATCTCTCAAAGGAATGCTCTAAATAAGTTTGAGT
TTATCAACCCAGTGATATTCATAATGGAAGTTAAATCGTAGCTTGGATCA
TGAGATTTACGTTTGGCTACGTTTCGAGAGATTCTTCTCCCATCATCGGG
AAATGTAGAGGATGTTTTCTCCACTGTTTGTACTAAGACATTCTGTTATG
GCGCGCCAAAGCGGAAATAAATACTATCTCTCATTTCGCGACACTACCTT
TCATTTCACGACACTATCTTTCACTTTGCGGCACTATCTTTCATTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNGCGGCACTATCTTTCATTTCGCGACACTATCT
TTCATTTCGCGACACTATCTTTTATTTCGCGACACTATCTTTCATTTCGC
GACACTATCTTTTATTTCGCCACACTATCTTTATTAAAACGACACTATCT
TTTTTAAAACGACACTATCTTTTTTAAAACGATACTATCTTTCCAAAAAA
CATTATCTTAATTGAAACAATACTATCTTTTTTACGGGATACTATCTTTT
TTATGGAAGCCGAGAAGTGCCATCGACAAAAAAATATTTAATTTCNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNAGTGCCGCGAAATGAAAGATAGTGCC
GCGAAATGAAAGATAGTGCCGCGAAATGAAAGATAGTGCCGCGAAATGAA
AGATAGTATCGCGAAATGAAAGATACTATTTATTTCCGCTTTGGCGCGCC
ATATTCTGTACCCATAATTATCAAGTGTAATTTCCTTGCAAGGTGTGAAT
CCCCATGTTATCATAGTTGTAAGGTAAAATAGCTCTTGAACTTATGAGAT
TACTCATTACTGTGATTTCCATTTTGCCTCTCTGTTCGGTTGGGAACCCA
AATATTCTCTCAAATGAACTTTGTTTGCATTTATAGGTGGGCTTTCCGAA
TGCTGGTAAATCTTCTCTCCTCCATTGCATTTCACGTGCAACACCAAAGA
TTGGAGATTACCCTTTCACAACATTGAAACCAAACATCGGTGTGATGAAT
TTAAAAGATGACTTGACTGTTTCAGGTTTTTATCTTTCGTTTCCTTGTGT
TAACACATTTCTGCCTATTACTTCTTAGTAACATTACCTGACATTCTAAG
AATTTCATAAAAGTTTGCTTGATTTTGCTCCTCAATTTCTGAATATATGG
GGTTTCAAATAATTTTCATGACTTTTAGTGGATCATGTAAATTTGAGATA
TTTTATTCTTGTTTACTCATTAAAAAACCCAAATTATTTTTATTTGTAAC
CGTTTAGTTGCTGATATCCCTGGCATAGTCAAGGGAGCCCACGAAAACGT
TGGTCTTGGACATGAATTCTTACGCCACGTTGAACGTTGCCATATGTTAA
TGTATGTTATGGATTGCTCATCACCGGACATGCTTTCCCAGTTCGAAATC
CTGAAAAAGGAGTTAGATCTTTACAAAGCTGGACTGTCAACAATATCATC
CATCTTCATAGCGAATAAAATCGATTTGATACAAGACCAAGACGAAATGA
GAAATAACATACAACAACATGTAAACATGCCTGTTGTCCCACTCTCTGCT
AAATTCAATCAAAATATTGAAGAGTTGAAAAGTCTTATATTGCAGAAAAG
GAAATTTAAGCATACTAGCTAATGAGAAAAGAAAAACGAAAAATAGATTA
TATGTTATGGATTGCTCATCACCAGACATGCTTTCCCAGTTCGAAATCCT
GAAAACGGAGTTAGATCTTTACAAAGCTGGACTGTCAACAATATCATCCA
TCTTCATAGCTAATAAAATCGATTTGATACAAGACCAAGACGAAATGAGA
AATGACATACAACAACATGTAAACATGCCCTTTGTCCCACTCTCTGCTAA
ATTCAGTCAAAATATTGAAGAGTTGAAAAGTCTTATATTGCAGAAATGGA
AATTTAAGCATACTGGCTAATGGGAAAAGAAAAATGAAAAATAGATTATA
TGTTGTGGTTTGTTCATCACCGGACATGCTTTCCCAGTTCGAAATCCTGA
AAAAGGAGTTAGATCTTTACAAAGCTGGACTGTCAACAATATCATCCATC
TTCATAGCGAATAAAATCGATTTGATACAAGACCAAGACGAGATGAGAAA
TAACATACAACAACATGTAAACATGCCTGTTGTCCCACTCTCTGAGTAAA
TTCAGTCAAAATATTGAAGAGTTGAAAAATCTTTTATTGCAGAAATGGAA
ATTTAAGCATACTGGCTAATGAGAAAAGAAAAATGAAAAATAGATTATTT
AGGTTGTATTTTATTTCTTTTAAAGTATGATGTTTGGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00024408TCONS_00024408Clytia hemisphaericatranscript
TCONS_00024407TCONS_00024407Clytia hemisphaericatranscript
TCONS_00024406TCONS_00024406Clytia hemisphaericatranscript
TCONS_00024405TCONS_00024405Clytia hemisphaericatranscript
TCONS_00024404TCONS_00024404Clytia hemisphaericatranscript
TCONS_00024403TCONS_00024403Clytia hemisphaericatranscript
TCONS_00024402TCONS_00024402Clytia hemisphaericatranscript
TCONS_00024401TCONS_00024401Clytia hemisphaericatranscript
TCONS_00024400TCONS_00024400Clytia hemisphaericatranscript
TCONS_00024399TCONS_00024399Clytia hemisphaericatranscript
TCONS_00024398TCONS_00024398Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00024407-proteinTCONS_00024407-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000491supercontigsc0000491:51610..61548 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MTG2PREDICTED: mitochondrial ribosome-associated GTPase 2 isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.61	11.38	4.14	4.55	9.37	8.93	8.7	9.41	5.97	4.97	4.71	4.07	7.74	7.31	7.02	6	6.54	8.65	3.67	2.86	6.5	5.64	20.46	14.54	3.6	6.48	2.45	3.47	9.79	11.3