XLOC_013711 (gene) - C. hemisphaerica

Overview
NameXLOC_013711
Unique NameXLOC_013711
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000492:135855..144314+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013711 ID=XLOC_013711|Name=XLOC_013711|organism=Clytia hemisphaerica|type=gene|length=8460bp|location=Sequence derived from alignment at sc0000492:135855..144314+ (Clytia hemisphaerica)
GCTTTCATCTCAAAGATCGTGcgcttcaaaacaaaaacaaatcagAATCA GAACATCgacgaaaaaatatattttatttctttgattgATCCTTTTTCCA GTTTCTAACAATGTCTAGAAGAAGAATGTCAAATTCACAAGATGTCTTTA TAGCGTGTAGGGTTGGAGATGTAAGATGGCTTGAGAAAATCACAAGtaat gaaaaggaaaaacaagCAGCCCTTTCCACAAGAGACGGAAAGGTGAGTAG AAAAAAGGAAGAccttgcattgaagcgaagcTGCTGTCTCTGCCATACGA CAGAGATGAGAGGCCATGAGAGagtaaaatgttttgaaataaatGCCGAA TATACAGtacgaaagcagccggcgaggcgacctttttttctgatgtgttc tgagagcatatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATAGTGCgctaaaggtt tcctagaaatcagaacacatcatttggataaaaaattgaaaggtcataac attttgtctcctagaagataagaacacatattttctaaaaaatcccttcg ccggctgcttctgacaGTAGtatcgaaagcagccggcgaggcgacctttt ttcctATGTGTTCTGctgagagcatatttcagctagaaattttgatctgt tgttCTGGTtagatcttcgaaaattaatcagctagaaataccGGAAAtaa aatgatgtgttctgaacgagacaggggtataatcaagaaaAGATTGGTAA CCCtataaattttcagaacacatctttcgtggagaaaaacaaattagtac gtttttttttatgtgttccgatttctaggaaacctttatcgcactacttg tctccctaaacttatcactactttatggtttgaCGTGTTCTAAAATCTGG GAAAACAAGTTTGCCGAGATAATCTTGTATTGTAAGATATTTAGTAGagt gaaatttgtaaaatcgctcgattttttttagTTAAAGCACTTGTTccttg ttatacattttggaAAGCGGTAGAGTGGGGGGGGGTATGTGTCAAAATAA CTTaggtgcaaattttttttcggacagtttgctgtgattttcggacaaat ttcggtctcaggcaaaaattatagggtcaaaaatttatgaaacttTTAGC TTGAGAAATCCGAACACagcatttgtataaaaaattgtgaaaggtcataa catttggtctcctagaagataagaacacatatttctaaaaaatctcttcg TTGGCTGCTTTTGTACAGTATGTAGTATCAATTAGTCGAGCTAGTACAAA ACATAATAGAAAAATATGTGACACTGGAGAAGTGCCGGAGTGCGCTGGAA TGATATTACAATATTTGTATTCGACCCCTTACCCTTCTCTTTTATAATAC AGGGATTTTTACCGATTCACATAGCCGCAATGGAATGCAAACTGGATGCA TTGAAATATCTGGTGGAGAAGCTTAGTTGCTGCATTGATTCAGCCACTCT ATCAGGATGGACTGCCTTACATTTCTCAAtcaataataacaaaaaaatgg aATCACTGAAGTGTATGGATTACTTGCTGATGAAAGGGGCTGACATTGAC AGGTGAGTTGATAGAATTTTGGTGAAGGACGTGAAGGGTAAAAAAAGACC CCAGTGGACCTTCAATTTACGCAATCGTGcaattttttccccaaattcac gcattcgagcacgcattcacgcagagctttccaattcacgcattcacgca attttttcttaattttcacgcattcacgcaagtgaaaaagccctcCCGCA TTCACACGAACCGCTGGGGGCCCAGTAAAAAGAAGTATCAGGTTCTGTTT ATAagacagttgacgctctcttaacTCGTTTTTCAACAAGGGGAATGAGA TTTTTATTACGTAAGAGAATATCGAAGGTACATAAGAGCTGCAGGAAAGG CAATTTAAANATTTCTCAAGCTAAaagtttcataaatttttgaccctata atttttgcctgagaccgaaatttgtccgaaaatcacagcaaactgtccga aaaaaaatttgcacctAAGTTATTTTGACACATACCCCCCCCCACTCTAC CGCTTtccaaaatgtataacaaggAACAAGTGCTTTAActaaaaaaaatc gagcgattttacaaatttcactCTACTAAATATCTTACAATACAAGATTA TCTCGGCAACCCTGTTTTCCCAGATTTTAGAACACGtcaaaccataaagt agtgataagtttagggagacaagtagtgcgataaaggtttcctagaaatc cgaACACagcatttgtataaaaaatagtgaaaggtcataacatttggtct cctagaagataagaacacatatttctaaaaaatctcttcgTTGGCTGCTT TTGTACAGCATGTAGTATCAATTAGTCGAGCTAGTACAAAACATAATAGA AAAATATGTGACACTGGAGAAGTGCCGGAGTGCGCTGGAATGATATTACA ATatttgttttcgaccccttgcCCTTCTCTTTTATAATACAGGGATTTTT ACCGATTCACATAGCCGCAATGGAATGCAAACTGGATGCATTGAAATATC TGGTGGAGAAGCTCAGTTGCTGCATTGATTCAGCCACTCTATCAGGATGG ACTGCCTTACATTTCTCAATCAATAATAGCAAAAAAATGGAATCACTGAA GTGTATGGATTACTTGCTGATGAAAGGGGCTGACATTGACAGGTGAGTTG ATAGAATTTTGGTGAAGGACGTGAAGGGTAAAAAAAGACCCCAGTGGACC TTCAATTTACGCAATCGTGcaattttttccccaaattcacgcattcgagc acgcattcacgcaaagctttccaattcacgcattcacgcaattttttctt aattttcacgcattcacgcaagtgaaaaagccctcCCGCATTCACACGAA CCGCTGGGGGCCCAGTAAAAAGAAGTATCAGGTTCTGTTTATAagacagt tgacgctctcttaacTCGTTTTTCAACAAGGGGAATGAGATTTTTATTAC GTAAGAGAATATCGAAGGTACATAAGAGCTGCAGGAAAGGTAATTTAAAC AAGAATTTCGATTGGTTGTTAAAGCTGTTGCGAAATgtgaataaaaaaag tatacaaataCTGTATATATATTTCGTACTCTGTCCTGTTCCTATATATA TGGCTTTATTATGCAAGCTAGCATCAACCAATGTCTAGGTAGATCGAGAT AAAAAAAGATCCTTTTATTCCCCGAACCCTGCAAGAAGGGATTGCCTCAA AGAAAGGGCTCATCTGAACGGtcagaacatcaaaatttaaagataTTATT GGCTTAAAATTAGAAGGGATAGCAAAGATTTAGTCAACAACCAAGTTTTG TTAAAAGACTGTCTCACTTTTTAATTTACCTGGCAATTTCtcagcatgtt tttatgctataTAAAAAAGCTActattcctttttttcttttataagaaca ttgaggctcaaaatcaccaaaaaataagaacaacttaagaaaAATGTTGG AGCCTGAAGTTACtttcaagcaatttagaggtCATAGTATGTAGTATAAA tgggtaaaagcctaaaatacctcaattacaccctataCATATATATAAGA ACGGGATAAGAACAATTCGAGGCTCgtcaaagtgtcaaaaaatagaacag ccgagcctcagcaaaattgtacctggttcttatgaaaacaattctttttt gaaagatattttcaaaaaaagatgaaagatttaaaaaagttgaattacga agaagaaaaatgaagatctgGTTATCAAATCATGATATcagatttttttt agaatacCTGAACCTTGTAATCTACCGTATtgcttcaaataaacgcccct tatTTAAGTTTCTCGATTTTAGGAGGGGGTGTTTATTAAATTACTTGAGT CTAAcgtcgaatatttagagcaTATCTACAGATTGATCAGCGTTTTAGTT AAATATCAGGATTTCAGTGCAAATTTCTTTGGGTCAGCGACTAAAATTGC ATCAAAACTGATAGGTTACAAAAAAgactttcttttcaattttaaacaaa acttGTATCAAAGTATTtaagtcacaagtttctaataaacgcccctcccc tagagcttttaggaggggcgtttattcgaaggggcgtttaaaagaattGG GGCGTTTATTTTTGGAAGTATTTTTCTCCTAACAGATTattgctttttaa aaatatagCATAAATNAATTCGAGGCTCGtcaaagtatcaaaaaatagaa cagccgagcctcagcaaaattttacctggttcttataaaaacaattcttt tttgaaagatattttcaaaaaaagataaaagatttaaaaaagttgaatta cgaagaagaaaaatgaagatctgGTTATCAAATCATGATATcagattttt tttagaatacCTGAACCTTGCAGGCCTTTAATctaccgtattacttcaaa taaacgcACGGGGCGTTTATTTAAGTTTCTCGATTTTAGGAGGGGGTGTT TATTAAATTACTTGAGTCTAAcgtcgaatatttagagcaTATCTACAGAT TGATCAGCGTTTTAGTTCTATACCAGGATTTCAGTGCAAATTTCTTTGGG TCAGCGACTAAAATTGCATCAAAACTGATAGGTTACAAAAAAGACTTTCT TTTCAATTCTAAACAAAACTTGTATCAAAGTATTTAAGTCACAAatttct aataaacgcccctcccctagagcttttaggaggggcgtttattcgaaggg gcATTTAAAAGAATTGGGGCGTTTATTTTTGGAAGTATTTTTCTCCTAAC AGTTTattgctttttaaaaatatagCATAAATGTAGTAAGCTGAGAAATT GTAAAAAGGTATCCACATACAGAGATTACATAATTCAATGATTCATCAAC TCTACTTTTAACCTCCAATTTACAGGCAAACAGATCATGGTATGAGTGCT CTACATCTTGCGAGTTCAATTGGGCACATAGAAGAAGTTAGACTACTTCT AAAACGAGGAGCCACGGTAGATCTCAAGGATACATCGAACAGGATGGCTT TCATTTATGCAACTTTATGGGGACATCAAAAAGTGGCTCGATTACTTGCG CATCAGATGTGGTTCAAACAGAAGAATGATAAGGAGTTATCGAGGCAAAC TTTTGATAAATATTCGAATGAATTACGCAAAAGGTtcgtgaaagaaaaaa aagttatgaaaagTATACGACAAGAAATCGCAGAAACTGCTTATAAAGAA TGGCATATGAAAAACGACTTTATTTACAATCCGTACGCATTTGGTCAGAT TTTGTACGATAGAACCAATTTTCAGAAAAGCCCAAGCACAAGAGCCACAT CAGTAAGGTCAATTTCTCGGCAACGTTTAGATTCAAAGACTCTTTTACAA CGAGGAAAAATGACAAGAACTCGTGAATCACTCACACGAACGAATGACAG ATCTGTCACTCTTCTACCCCTATCGGATTTTTATAAAACAATTTAATTCT TAAAATTCGAGCAAGTTCAGAAAGCAACTTTTTAAGGACAACAACTATCG CTGTCCCATTTCATGAGGAagtaaaaaatcgaaaaattattgtgaagatt ttaattatatttatGACGATAActttatcaaaattatttctcACGGGTAT AATAAAGAATATGAAGTAAACAAACAGGACACTGGAAATCGAAAAGAGAG AATTTCTAATTCTACGAAATCTGCAGTGCCacttttttgtgtgattgtgt ATTGGATTGGATTTTGGCAAAAGAAAAAATCGtgaaacaaaatatttgaa aatacaaaaaataatgaaaatattaaaagaaaacagagataaaatttata ttagtCTTTTACTGTCAATTTAGTTCAGACCTGTGTCAAAAGTTTGAATA GTTCGTTATTTAAGTTtgcaaaacaacaatttttccAATTCAACAAAGGT CTCGTAAATAATCATAACCATTTTTATCTAGTCCCATATTCAggaatgtt tcatttttcacgtttttgtaaaagtttttggaatAGTTCGAAAAACCAAT TAATGATAACAGTGAATTTAAAATGCTCTCCTTTATTGATAATTAAGAAG CCGTCTCTTGATTTCTCCACACAAAATTACAAGCGGTTAAGGTAAGGTGC TTTAATCAAACAGAAAATCCGATATATTGGGCTGCAAATATCGATATAAT GGCCTGGCaatacatcttttcgaccgtagtcgcgcggtcaggtcagtctt tattatttaattatccccctaaacacaaacctttttctattgttaactgg tgcgaaaaaaaagactgggacggttttaggatggtaaaacggacaaaaaa atgcccgcgcggtaattggcGGTTACagtcaaaaaggtgtatataAAAAC TCAACCCTCGAAAAAAAGGAAGGATTACATAAATTCTGTTCAGCTTTCTT ACAGACACCACAGGATACAACACCTGTTTCGTGCTCTGAATCGAAAACAG TCATTTGAGCGAATTATTGATtcttgaatttgtttttttttcgaatccAC ATTACTTTAACACTCTCAAGTGCCCAACAAAGGGAGTCGTCAAAAAAATG GAGATTGACATTCAAAAAAAGACTTCTCCTGAATGCCCTTTACAAAGTTT TGACGAACAAAGTCATCGGGGCTGTCCTGTTCCAGTGATGTGAAAAATTT ACTAGCGGTTCAGGGGGACTTGGAGTTGAGAGAAAAAGCGGGAGATTGGA ACCCTTTTATCGTGGTTAAGCGATTGAAGTTTGATTAAAGCACCTAGACT GCGTTCGTAGCAGCCACGCAGCAACCTCCAATCAACATACGTAGTACTGC GATCGAAATTGAAATCAAGCCGAGTCGAATCTAACAAAACTCGTATATTT CCAACACCATTCCTTCTCTTAACATCGTGTGCTTTCAGCTTCGTTAACTA TCATTAAATGAATATCAAGACATGGGCGTATCTGTATTTCACGACACAAT CCAGTggttaaaatgattttaatcgGGTTCGACTTTATTCATTTGATAAC ATTTGCTGCACAATCCATTCCAATCGGCTCGTCCGAACATATCGCAATCC GGATTCCGACATTTTGTGGGAATTTGTTGAAACATTGGTGCACTTTGAAC TGGATTAGGGGGCGGTATCGCCATCATCATCGGGTTACCGCCCATGGGTG GTTGTGATTGAAATCCTAAAGCTATCAAAAAGATATGTGAGTTATTTTGA GAATCGAGAAAAAAGGTCCCTGACCTGAGGTTACTTGGTGATAATCTTTA AGTTGCAGTCTTTCATAAATGGGACTGGAGTAATTTTTTCTTCGAAGAAT GCATATATTTAAAGCTTTATTAAACAGTAAATTAATTGACTTACTTTTTC GTTCGTTTTCATGTTTGGTGACTTCCAAGAAACATCCGTGACAATAACCA CCATACTCAAACGTCCCAACGAAATCACAATCAAAACTTTTACACTTCTG CGCCTGTGGATGAAATCCTTCTTCTCCTCCTTGGGGTTGCGGACTTGGCA TCCCACCACCGGCGTATTGTTGCTGCGGAGGCGGTGGCGGTGGAGCCCCC ATACCGTAAGCTTGCGGAAAATTGGGGTACTGGCCTTTGGAGCATCTGTC ACATAGTGTTGTTGTCGGAACAGCGAATCCAGTGCAACCTCTTGTCATAC ATGGCATCTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00024428TCONS_00024428Clytia hemisphaericatranscript
TCONS_00024429TCONS_00024429Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00024428-proteinTCONS_00024428-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000492supercontigsc0000492:135855..144314 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.41 1.84 1.04 1.37 5.71 3.92 2.5 2.38 3.36 3.48 2.45 2.87 0.69 1.02 0.84 0.98 1.41 1.01 1.31 0.79 1.15 1.22 4.57 2.86 1.31 1.83 3.77 4.43 3.77 4.34