XLOC_013732 (gene) - C. hemisphaerica

Overview
NameXLOC_013732
Unique NameXLOC_013732
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000499:292025..296147+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013732 ID=XLOC_013732|Name=XLOC_013732|organism=Clytia hemisphaerica|type=gene|length=4123bp|location=Sequence derived from alignment at sc0000499:292025..296147+ (Clytia hemisphaerica)
AAACGATCTACATGTTAAACCCGACTAGTATCTGGTAAATCTTTATGTTG
AGGCCGACTGATAACATCAAAACAAGAACTCTATCTTCACTCAAAAAGCG
TCCAAAAaggtatattttatttttttatagtaTATACATTTAAAAGAATC
CATCGGGTCTGATAGATGGTTTCCAGATTGATGACTGAAAGTCACTGGTG
GGGCTCCAAGTCCAAAATATCTTTGCAATAATCACACAGGTTTTTCAGGG
GAGGATATTTTGACATAGTTTTATAATAGAGTGCAGCCCAGCAggttttc
agctgttttcagaCAGTCAGGGatatccctcaattgcggtatactgcaat
tgcagtaaaaacgtcacttttacatttttcatatactgcaattgcagatT
ATTAAAAAAACAGAATTCGAGATTCAAGGAGcgagaaaacaggcaatttt
tatACATAATATAATTGaccatatctttttaacgcaccTAGgcgaaatat
tttttccgtagattagattcttttaataaagaaaagttttcttctcgaca
aatgaaaactactgcaattgcagtataccgcaattgagggatatCCCTGA
CTGTCAGAGCATGCATGACATGGGTTGCCCCAAGGAAAATTTCCAACATC
AAAACTCTGCTCCTAAGATCTGTTTCCCACCACAAAAAAGCCAGAAGAAT
TGGTGAAATTAGCcagtttttaataattttgccCCTGAAATGtagatatt
atcaaaattttgctcCTGCTCTTAAAAAGTAAGCAATCTCTGCCCCCGAG
ATCTCGATGATTTCTGTGTCATACTCCGCAAACTGGGAGTGCAGTACCGT
GGAGtcgagtaacttgcatcagtggagggaaacttgcatagactgaccaa
tcaaagcagcaaaatttcaaaacaagtgaACTAACGGACGCAGCTCCACT
CGCAGCTCGACTActctactttttattttaatgaccagccaggtcattca
tttgagggggctatgcatgttagcctccactgatgcaagttacccgatct
cacggtacatACAACAGTATAAGAGACAACAGTGGAGTGCTTTAATAGTG
TTAGGTGTTAGGGTGTACACTCGTCAGGAGTTTTAGTGGAGAAGATGACA
AAGCGATAGGAAAAAAATGCGTTTTTGACTTTGATAACCCATATCTTGAT
AGAAAAACATTATAAAAGgctaaaataaaagttttaaaagtgtACAGAAT
CTATCTAGCTGGGCATTGAACAAAGAAAGAATTATACAATCATACCTCTT
TTCTTCATCTCACAATCTCCAACACACTCGCTAAGAGCCCAGTTTGAAAA
GAAGAGGAAATTGTGAGATAGATAAAAGAGGTCAATTCAACACACGCAGA
AATGATAGAGTTTTCTTTTTGTGCCACCTGCTTCACCAGTAGACACCTTG
CCGGGTCTTCTGAAATGCATTATAGTCTTTCAAGGTTGTTCTTCATTGTC
CATCCATGCCGTTGGGAACATGGGACTTTTTGTATTTCTTGCAAACTTTA
TGAAAACAGTTTTACTTTCCTAAGGCGAGATGAACTGGTTTACTGGTTGA
ATTTTTCAATTGCAGTGGCAAAATGGTGTACATGGAAGGTTTTATAGGCA
ATTTCAGATGATGAAACtgggaaatttcaaaagaaaagaaaataatgaac
ttttattgaaataatgaacttttttaaGCGGCAGCTCGAAGGCATGCGGG
CAGTCGAAGGTTAACCGGTTCATTTCCCCTTGCCTAATAAGGAAAGTCAG
GACAATGGTAAAATGCCTTTGTATTCCAAGTTCCCAAATAAGCGTACCCA
CCCGGTTATCAATTTTAGGACAATTTTTTGGACCCCCCTATCAACATTAT
TATTAGTTTATTTGTCAACACAGGTCAGCTTCTATGTACAAAACTATATC
TTTATATACTAAAAGAATTTCATGTTTTGTGTCTGTCACGCTAAAATGGT
ACGCCAGTTGCAATTTTGAATGGTTTGGGTGGTTGATTTGAGTATGAAAG
GAGGATTTCAAGCAGTTTTGAGACAAAAAAACTCATTTCCTTTTGAAAAA
CGAGTAATACGTCGTAATTTTNGTTTACTGGTTGAATTTTTCAATTGCAG
TGGCAAAATGGTGTACATGGAAGGTTTTATAGGCAATTTCAGATGATGAA
ACtgggaaatttcaaaagaaaagaaaataatgaacttttattgaaataat
gaacttttttaaGCGGCAGCTCGAAGGCATGCGGGCAGTCGAAGGTTAAC
CGGTTCATTTCCCCTTGCCTAATAAGGAAAGTCAGGACAATGGTAAAATG
CCTTTGTATTCCAAGTTCCCAAATAAGCGTACCCACCCGGTTATCAATTT
TAGGACAATTTTTTGGACCCCCCTATCAACATTATTATTAGTTTATTTGT
CAACACAGGTCAGGTTCTATGTACAAAACTATATCTTTATATACTAAAAG
AATTTCATGTTTTGTGTCTGTCACGCTAAAATGGTACGCCAGTTGCAATT
TTGAATGGTTTGGGTGGTTGATTTGAGTATGAAAGGAGGATTTCAAGCAG
TTTTGAGACAAAAAAACTCATTTCCTTTTGAAAAACGAGTAATACGTCGC
AATTTTTATTGTATGtttaagattttatttttcgttAATGATTGAGCAAG
AAGATGGTAGCCTAGCTATGTACCAACAAAAGATATCACCAGGGACATAT
GAAATATGGTTCCCACATTGGCAGTTAAAACTGATGTGGACCTGCAGgct
aagaaacaaaaaagtgaaacagctGTAAATGCAAAGTGTGTTTATTTTCG
TGCAAGACTAAGGAGTTAGGTTAGGTTAAAAGtgtcttatcctgttctta
ttggGACCTccccaaagaaaattttgaggctAAGGGCTAAAATTTGGGTT
CCTACGTCAAAATGCACATCTCAAATTGACAGGTCTGGTGATGATTGGTC
ATATGATCAGAAAGAATTAGATGTGATTTAAGATCCTTTTAAtgaatttt
gtcattttgtgttagttaaaaagttttttttaacataacttttaattgaa
aaaaatgaatcaacAATAAATCTTTTAGTTCACAATATTTTCACAaaact
gtatactttttttggtgcacctaGTATAGTACAGTGCTGATTTCCAATAA
GGAAATGCATATAGATGCTCTGCctcccaaatctcctgagtaaATATAGT
ttgacagaaattcttatttcctCTCATATTAGGAATGTCTGGCGCTCACa
caatatttttgtttaaagtTTTGCTGAGTAAGCTAGATGAGAGTCTGCAA
AACGTTATGAAGGGTGGACAGGggtggaaaaaattttcttacataTATCT
TTACACACTAggcaaataaaaatgaaaattgtgttgtttttaaaaacctt
attttttgcTTCCTCTCTTCTTAGGATAAAAAGTAAGAAATGTCACAATC
TGCACAAACATTTCAGCCACCCAAATCATGGGAGTTGAGCTTATATGAAT
TACATCGTACTCCACAAGAAGCAATAACAGATGATACAGAGATAGTGTTG
TCACCAAGAAGTCTTCACAGTGAATTAATGTGTCCCATTTGTTTGGATAT
GTTAACTACAACGATGACCACCAAAGAATGTCTTCATAGGTTTTGTCATG
ATTGTATTATCACTGCATTGAGAGCTGGTAACAAAGAATGCCCTACTTGT
CGAAAGAAATTGATTTCGAAACGATCTTTGAGAAGGGATCCAAATTTTGA
TTCTCTCATCGaaaaggtattttttttcattatgtATATGAGAANAGATC
CAAATTTTGATTCTCTCATCGaaaaggtattttttttcattatgtatatg
agaagatgaagaaaatactttttgataatttagtAATTTATTTAGGAATT
CGATAAGATGCTATTTACCATCAGTAGATTTCATCAGGAGAATCATTTTA
CTTTCAAGAcaactttcaactttttgctTCTCTCATTTATGTTACAGATC
TACCCTAATCGTGACGAATATGATGCACAGCAAGAACAAGTGCTTGAGAA
ACTCAATCAACACACCAATCAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00024461TCONS_00024461Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00024461-proteinTCONS_00024461-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000499supercontigsc0000499:292025..296147 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.28	12.35	4.15	3.77	9.15	4.59	5.5	7.05	5.03	8.52	4.07	6.01	4.51	2.67	3.85	5.29	4.85	3.93	2.16	2.25	4.34	6.48	13.01	14.34	7.98	8.51	3.59	3.82	8.83	9.27