XLOC_014109 (gene) - C. hemisphaerica

Overview
NameXLOC_014109
Unique NameXLOC_014109
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000521:19263..23393+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014109 ID=XLOC_014109|Name=XLOC_014109|organism=Clytia hemisphaerica|type=gene|length=4131bp|location=Sequence derived from alignment at sc0000521:19263..23393+ (Clytia hemisphaerica)
GGTGAAATTAGCGTAAACATCTAAACAGAATGGTTTTCTGGTTGCTGTAG
CAgattaaaattccaaaaaagaaCTTTAAATATAAATGTGTGGAGTGTGA
ACATTTTCCCAAGACAAGGGTCGAGCCTATGATTTAGGCAGTAAGCATGT
CTACATGGTTGATGCTTTTGCAATTTGCATTCTTCATAACGTTATCTTTT
TGTGGCAATGAATTGCACATCATCAATGAGAGGAGACcagaaaaccaaaa
acatttcaCCTCATCTatagacttttttacaaacaaagATAAAGGGAATA
GAGATTTCTGTAACAGTTTGAATGCAACTTGTGTCCATAAAGAAATTTGT
GATAAATGTCGGTGTGACAAGGATTTCATATGGCTGGATTATACTCAAGG
ATGCAAGGGTCAACAATATTTGTATAACATTACTAATGGTTTGTCCAATT
CTTTCGGTGAAATATGTTATATGTAACGCCTTTTGCTCGGGGAAAAGGTT
AAGGAActtgccgctggtcagggtctcTTTTTAAGCCTCATCTGTTTCAG
TCATATTTTCACCCATGGTTAGAACTTGATCAGAAAAATACCGGACTAGC
GGACTCAAACTTGGACCCTTAcaatgcagagaaaatttagcccccggggg
ggggggcactttttgattttgaaaacgaccgtacgttcggccaaaaatca
agTCTCTAAAATCGGgtccttacagtgcagaaaaaatttggttgaaaatg
gacccttacagtgcaatttttcgaatttttttgcccttttcagttttacc
tcaaaatttagtattttctcaaattttatacccttacagtgcactttttc
ccacttgctcacaaatcaacccttacagtgcactttccaaagtctaaaaa
acctaccattaagggccgcacgtccggtaggtcacttacctgaaGTGCCC
CCCCCCTCGGATTTAGCCCCAAATTTGAATTGTGAAATCGTGCATTTTGG
GAATTAAAAGTCAAGTTTTAAATATCTGTCCATCTTAAATGGTAGAATAT
ATCCATTAAAACAAGTCGTTAAAAGTGTGCTAGCGAGACTTATCTTGTTT
TTagttctgatttttttcatcggCTGCACTTCCTGTATTTAATCAAGGTC
GAACACTTCACTCAGTAAATTCTTTATCAAACAAAACaccgatacacgtt
ttttataagaaaaaactatataagaacataaggcttcgatggccaaaatg
ttaagaacaagttaagaacattttaaggctgtacagactctaaaacaccc
gatttcttaggaaaatggacaaaaatgctcaaaaaatggcgaaaattaga
acttcttaaaacatttttaggtttaaaactccaaaagttaagaTCATCcg
taggcttcaaaaatgttggatgttcttataaaaaacaccgATGTTTAGAA
CGTGAATAGTCTTGCAAAATAGTTGTGGCCACTTATTCATAATAGCCTTT
CcatccatttttcttttaaNGTGTattcaatgaaacgaggggttatCAAT
ACAAAATCATCCGAGAaattccgcgttaattatatggtcaaaaaaagaat
tgaagaacacttaatcgctattcttttcgaaacttataaaaacattcgaa
actataaaaaaccATTCGACTGAAACTCTTATTTtgattaaccaatcaaa
atattgtacgatacttttctttcaaccaatagaaattgtTGTTTATATCa
aggcgattacaaaaaagcggggctattacggatttatcgccccgctcgtc
ctttacaaatctaagctaaatgtaatcaaccatataattaacgggaatat
aatttatatcaaggcgattacaaaaaagcggggctattacggatttatcg
ccccgctcgtcctttacaaatctaagctaaatgtaatcaaccatataatt
aacgggaatataatttatatcaaggcgattacaaaaaagcggggctatta
cggatttatcgccccgctcgtcctttacaaatctaagctaaatgtaatca
accatataattaacgggaatataatttatatcaaggcgattacaaaaaag
cggggctattacggatttatcgccccgctcgtcctttacaaatctaagct
aaatgtaatcaaccatataattaacgggaatataatttatatcaaggcga
ttacaaaaaagcggggctattacggatttatcgccccgctcgtcctttac
aaatctaagctaaatgtaatcaaccatataattaacgggaatataattta
tatcaaggcgattacaaaaaagcggggctattacggatttatcgccccgc
tcgtcctttacaaatctaagctaaatgtaatcaaccatataattaacggg
aatataatttatatcaaggcgattacaaaaaagcggggctattacggatt
tatcgccccgctcgtcctttacaaatctaagctaaatgtaatcaaccata
taattaacgggaatataatttatatcaaggcgattacaaaaaagcggggc
tattacggatttatcgccccgctcgtcctttacaaatctaagctaaatgt
aatcaaccatataattaacgggaatataatttatatcaaggcgattacaa
aaaagcggggctattacggatttatcgccccgctcgtcctttacaaatct
aagctaaatgtaatcaacNCTTCGAAATCCTAAAGGTCGATTTAAAACAA
TGCAGTGCTGATGAGATTATTTGGAGATAAAGGTAATCCATGAAtagcaa
aacattttttcattaaattatAATGCAATTACACTGCCACTGATCTATCT
TTATAAGCATATTGAAATCAAAGTTTATATGGTAATTTAcatcagatgag
atggagtttttataagatactttaataattggtcatttgaagtaatgaaa
atgacgcgttctttagaaaatgtaacaaaattgttttattactggttaac
gaccaagcaaatcaaataagagctttaaaaactccatctcgtcccattTA
CATGTTGTCTTCATAAATTCAGTAAAACTTGactattttaccaaaattta
aaTTCGACTGCgttaaaacacccccttctcacaaacccagtaggattttt
tcagccagtggaggTAAAAGTAAAAGACCTAAACTCGACGGGGATTGATA
tttacatgtttcttttatggCTGGGCATTTGAATTCTATACTTtccgagc
cagaaaattcagtgggatgaaaaaaataaaacaatattttCAGTGAAGAT
TTGGTTATCTAATTATTCACTGCTGAGACAAAAATTATAGTATAATTTAC
CACTGGGGACGGTATTATGGCCATTTTCTCCAGTGGGAAAGGGTCCCAGT
GGATCTGTGTGAAGGGTTATGTTAACCTATCCCAAACTTAAATCTGTGTG
TAAATGACTCACGACTTTTGTGCCTTTAAATGATTTGCGACATGGTTAAA
GTGCCAGGACAAGCATTATTATGATCTTCTTTGATCCGTTGGAagtaagg
gggggggggggggaaaaNTATTTTAATCTTACGTCGTCGAAAGATTCAGC
AtaaattattttcatgtttGGCTTTAAGTGTGGGTTATGTGTTGAATGCT
TGAGTTCTTTCACATTCACAAATAAGCCATTGCCAAATTATGGCAATTTC
CACAATCGTTTAAATGCATAAAAGTTTGCGTGGTTGTGTCGTTGTGTACA
ATACCTCAATAGTGTAACACCTATATTGTTTCTATTACAGGGGAAAGGTG
TTTCACGCATTCAACTGATGCATCATGGGTACCCACAGTTCAAGAAAACA
TATCAGAGAATACTACGTTACCTCTTTACGTCCATGATACTTCAAATTTA
CCCAATGATATTCAGAATGTTTCGTGGAGTTGCCAAACGGACAAAGTAGT
TTGGGTTTATAACGGGAGTATCATTTTGAAAGAGAGTTTTGCAAGTGATA
TCAAGATAAACAGCAATGGAAACAAAACTTTACAGGTATGTTTTCGCTCT
CTTAGAGCGACCGTAATGCAATGGTAGAACATCTGGCTATGTTGGTGTGG
TTGTGTGTTCAACCCCCAGCGGGGTCATACC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00025089TCONS_00025089Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00025089-proteinTCONS_00025089-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000521supercontigsc0000521:19263..23393 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06	0.12	0.14	0	0.08	0.13	1.04	0.52	0.31	0.52	0.69	0.08	13	10.27	1.7	0.76	2.34	4.45	12.17	14.4	5.6	4.4	1.5	2.53	3.14	4.53	0	0	0.07	0.07