XLOC_014805 (gene) - C. hemisphaerica

Overview
NameXLOC_014805
Unique NameXLOC_014805
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000570:252..10608+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014805 ID=XLOC_014805|Name=XLOC_014805|organism=Clytia hemisphaerica|type=gene|length=10357bp|location=Sequence derived from alignment at sc0000570:252..10608+ (Clytia hemisphaerica)
GTTCAGGTCTGAGAAACGGGAACAACAAGGAAGAAGACTtgaaaacaaac
attttctAAAGAGAggaattgtttaaaatttggtGAGTACAATATAtatt
ttcgaccgtagtcgcgcgggcatttttttgtccactttatcACACTAGaa
ccgtcccaatccttttttgacgcattcgtctattgtctataggtgcgaaa
aaaggactgggacggttaaaacgtcaaaaaatgtaTCGCCCTGGGAACAA
GGTTCTTTTAAATCAAGGTCTTTACTTTCTAGcctaattacacccctgtc
ccaatgccccggtagaactttctccctcagtggggatgaaaatttctatc
aaaatgccaatggggatagaaaatctattgtttccagctcgaaaattcca
gtggggatggttttggagtgcaattttttacattcagttttcaatttggg
ataaaatcatagagcaatttcgcagtggggttgaaatgtTAGAATATtct
ttccaccggggacgattttttggcctattttcctaccggggtgggggtcc
accgggtctgtgacacagggatgtcCAGTTGATATAAAAAGAGTTAGAAA
TCTTtattcataaaataaaataaaacgtgGTCTATTTCCATTGGTGGTTG
AGAAAGGGTacagaaaatcaattttaattaaAGTCCAAAACTTACACTTC
GGCCAATTTCTttgtctgttgtcattgtcttttctcattagAGATTTtac
aaaccgaccgctgcgatggagtgttggtgagagaggggagacgatgagag
aagtgttgctatatatataaatcatacttcatcgcagagctctctgtacg
ggaatttttttatcaaacagacaatgcacaCAGAGTGTACTCTGAGGCGA
TAAACGTTAGATaaactctggtacagagtaccaTATTCCGAGATATTAAA
TGAACCAGCAATTGGTTTTTAGAGGTGCCAAAGCCTTTGATTACAAGTTT
CATTCTTTTaactttagcaaaaaaattgtagatttttgCCATTGCAAGAC
TTGCAAGCATCTGTAGAAACTTCATTACTAACGGAGCGCAAGAATGCTTC
CAAGTTTGCTGAAATTACACAATTCTTTATAAGCTATCAGATgccgaggt
agtgaattgtgtcacttcgtagggcaccccttagatcagggcaaattttt
gatattatgctcctaatagggtgtagaattgacaaaagaaaattgccttt
cgaatctcctgcagttttcgagtgaatcgatttttagttaatcgatagaa
cttgtCAAGGGTAAccgaaaatggtatggtttgttaactttcgatgtccA
AATCTCGAGagattttggtttaaatattgaaaattatcgatattttttgc
tgagtcagcagtttttcagcatatttacccaccttaaaaatgaattatct
cgagatttAGACATAGAAAGTTAACAAAtgataccatttttggatactac
taattcagggctattcagccgtgggaatgattttttctgaaaatgctcct
aggaaaatgctgacgtcatcggaaaacgcccaaaacgtcgatttttcgcc
ttaaaaatgtcatttctcggcaccaggtggtcgaaacttaaaaaataacc
ccattttctttatctacttttcacgttGAATCAGTTGGTAGCATCaggta
tttgattttcagactccGAAAataccgttagtaaaggggggacccttgac
aagttctatcgattaactaaaaatcgattcactcgaaaactgcaggagat
tcgaagggcaaatttttttgtcaattctacaccctattaggagcataata
tcaaaaatttgccctgatctaaggggtgccctacgaaaaccatctttaag
gccttttctgaacCTCGGACGCTGGCCTATAAAAAATGTATACTGGTCAA
GCTAACACACTGCTGCTAGCTTCGAAAAAAAAGACCACCCCCTCACTTAG
ATCATATTTCAAATTCTTGATCCATTTTCTAAGATTgatattaatttatt
ttttacaggCCATGTCACCTAAATTGATCTTCGTTATCTTGATTTTGATC
CAAGCATCATCCAACAATGGAAGGATTGTTCGTAACAAGATCATTGAATC
ACCTAATGGaaccaaaatcaaaatccaATACATCGTCATGACCGGATTTA
ATAACAAGAAGCTCCAAGGGCCAACATCTATTCAAACAACCATGGTTAAA
AGTGTTAGCCATTGCAAAGCAGAATGTATCCGGGTTAACAGCTGTATCTC
CTTCAATATTTTTCCGGCTGGGTCATTTTTTGATTGTCAACTTTTTGACA
CAGATCATTATATTGACCAGCAAATTTTAACAGATCAAACGGGATATCAA
TACTTCGTTATAAAGGTATTATCCTAAGTATTAAAGTATGAATTCCTAAA
GAATACCGAAATTGGACACATAATCCCTCTCCCTTGTATATCATTTTTCC
CCGATACTATATcactttttatttgacgtcagttagtcaacacgcatttt
gtgcagttcttcaaaaatggttgaaatttagcaaaatcaaaaacatgaac
gaaaaaaccgacaaaaagcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNAAAAATGAATTCCAAAGATGAcgatttcgtttgg
catgtaagaggaagccctagaacaaaccttcgcctagttcgaaaacctag
gacaaagaccaaaacaacgtcttctcttcTGTCCATNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTcacgactggacgac
agatgaagaattagacaatttataaatctaaaattatttcgtagaggtcg
atagacctgtgaaatataattctatgaataaaaaaaaataaaatagaagg
tttttaaagaaaaagaaattcaaaaaactttcagcaaaattaatattttg
taTGGAAGCTATAATGGGAAGCTTTTGTtggaccatgttcgcacgtgacg
gttccgtttcgctccgaaacgaaatgaagccttTCTATTGGTTGTattca
agtgttacgtcacttctaacccatagaatggcttcattccgtGTGGAAAC
TAAAAGAAGGAGCTTTTCTTTAAGAATATGAAATTTTTCGaagattgaaa
gaaattttcaatgtgaaaaagcttgtgaattaaaattgatgagtaagcaa
acgatatcacttttattaaaaaacaaaacctttaagttatTTTTCTAAGA
AGAACAAGAAGAGTCGATTTCCCAGGATCTCAACTTAAGTCTGTTTCCGT
TTATATTTCCAAGACAAACTCCTGCCGTACAGAATCAAAAACCAGAGTTA
TTTTGTGATTTATTTCAGAGTAATTGCAGTGTTGGAGATCCAAACCTTAA
ATGTCCAAATGAATTCACATACTGTAAACCAAACTATGATACAGACACCT
CCACGTGTGAATGTCGTTTTCCAGGTTGCTTAGATCCAGTGGTTTATACT
TGCACACCAGGTCCAACCATAAATGATACAGATGGTAAGTACAATgatgg
tcgaaatctattgagaattaagcttatttcctcgtttttcgaaatttgga
gttcgggcgagaaagtcgagtttgggccatctcttaaatttaatcgCATA
TTTCAATTTGTCTCGGGTTTATatacttccaggctatattatgagcctta
ttggaccatttttgaacttttggatcctcagatcctaaggtccacTACCC
TTGGAAAGGGGTAGGAGCATTGAAGTATAAGCCTTTTGAGCTAGAATTCT
AAAttctagccattcgggcttaTACTTTAATGCTCCACGGGTAGTGGTGA
CACATTTAAGCTAGAGAAAAATTGCTTCAAATCTGCAACTGCTGCTAAAA
ACTGGGGTGCAAATTAACTTGAAATGTTATTGTTTTgagctaaagtctgt
ctcgaaataatttgcagctggagaaaaaaatggctgtaacctttgataga
attcgaatcaagttgcgattttgtgctcgttaaaaagatNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGAGGGTTAAGcggcgg
atgaaaaataatgcctagggtctgaagtttgtcgaacaaagattgtcttg
catgggaatatatagagcagtgcagaagaaagtgttttagtgttttcaac
agagttagttcggcaaccacagaaagggtctaaatGATTGTTTTTAGTCA
GCAttctatttttattacattATGTAATGAATTTAATGAGTACATAGAAG
GGAAACAATCGCCGTTTAGTAGTGTCAACTGTGCATGCGTCCAAACAagt
ttccattgttttgattttagcgaccgcTCTTtcccgtaaaaaaacggtag
gtaaaattCCGGTTCTCGTAAGGAAACCTAGCTACCTAACCATAACTTCc
tttcctctagatgaatttttgtgaaatttttaggAGAGAtctataaaatt
atcattgatatcatgttcaaatatctaaaccattctctttaaaggaaaga
aaaaaattgacaatgtttacattcctctaaccttccacagtactaaagtc
cGCATTTTTACCTACGGTTTTTACGGTAGAACACGctcgagactcctaaa
cggtgtattataATATTTACACAtccaaattaaattttaaggcttgaagT
GTCCAGAGTTATTATATCAGCATATAGGATTAATGGTTGATCTAATACTA
AAAAGTTGATATATTTATTTAAGCTGAATACACTGACATTGcgagaagat
ttttaaaaatatgaaaaatcgtACGTGGTGCTAGGGGGGGGGTACATGCA
AAACCGACCTTAGTGGTCATAGCTTGAAGGTAAAGCAttcagctacggtg
cgcaaagTCGTGGGTTCAATCCTTGGCCAGATCATACCAAAGACTCAAAA
AATgttacttgatgcctctcttcTATTTGATGATAAGCAATCAAGAGAAG
GGTAAAGGTAagggagcaatccagggagaaagagtggcgccctctccTAC
CTTCGGCGGGTAGATAACTATCGAAAAAGGAGCCTCGACACCCCGACTGC
TGTCACAGACTTACTTTAGACCGACCTTAATCCCTTAATCCCttattttt
ttctaacttttcaGCATACGAACTGAGTTCAGGGATAACGGAAATTGGCA
CAACATCATCTGGCTGTCCTCAATACACACTCAAATTCAAATTTATGATG
ACCGCCATATATAGTTCTGCGTATAGCAAAGTTCTTTCTGTGGTTGATGC
AGGTAGTAATAGCGAATGGATCAGTTTCCGTGTAGATCGGAGTCTTAGGA
GTCTTTTAACGGGTCTTCGTGGTGTGGGTGGTAGCCAGACCATTGTTGAG
CCTTACCAAGCTAATGTCGAATATGTTATCATAGTTACATCATATAAGGA
AGCTGATGGTGTGGTATTATAGAGTTACGTCGAATGGTAATGAGAAGTTG
GCCAGGACACATACCAGGAAGACTGGAGCAGCAGCtgaaatgaaaatcaa
agtTGGCCGATGTGGGGCTTGTGTAGTTAGTGATtttgaatatatatttt
aaattttgatacagtggagtctctataactcgaacattCACGCAAATTTA
TTAGAGATCAGAAAAAATTTGAGAGTTGTGGAGTAAGGTATTGTTATTTG
aaaggacgagaaaacttgtcgGAGTTAAGGAAACATTCTACTTATAGATA
TTCGAATTATGGGGAGTCTACTGTGTTCGATCTGGATGCATTTTAACAGG
CCGAGGATGAGTTTTCTCTTTCAACAAACTTTGCTGATATTGTCATACAA
TcaactttctataattcgaaaccTCTATTACTGGAATCTTTCTGCAACTC
GACCTAAAATATTAGTCCCCTCAGGTAATGAGGGGTATAAATTACTTTCT
GTAATTTAAGTCCTTTTCTAATTCGAAGAGAACTTTTtatcccttgaaga
tcgaattagagagtaaTTATCTTGGTATGGGTGGGTCAAGGGTCATCTTT
AAATTGGTCCGGGATAAAAAGGcccaaaattttggattttctcaGCAAAA
AGTAGCTTTAATGTTTGTCCGTTTTACTAAAATCGGATTAAATCGAtcga
aaaaaatcgcgaaattttctggattatccgccaaaaatgcgattttaaaa
atttcgctgtggatttaatttcgcgagtcagaaaCCTCATGTgttttcgc
gaaagttaatccgattaagTATCATCAGAAGGAATAATAATTAAAATTTC
CCAAACTTTAAATAACATTTCTGAGTTGATAACTTATAATCTATTGACTT
TTTAGACCTAGCCTgttggaggttctataaattaaccgttcgttcgttcg
ttcgtttgaatgaaagtagggtaccatcattggtaaaagatggttgaagc
aggttttaacaaaaaaaatttcgcctCGAAAATTGAATCTTTAATCAtat
agccaaattactcaattttttgatttttgattagattgttgtttttttgc
acaTGAAGGATTAGTTTTGAAGAACGTtagtgtttagacatgaaattttg
gctgcttGAAGAGTTTTTTAGAGAAattggccaaattcgatattttttta
taagcgcATTTCCAATTAATTAGTTATTCGCTTGTCTCGCGAttagctct
ttcattctttatgatttttttgcacaaaggtgcctAAATGTAAAcactcg
aatgtgacggagcccaatttcgAGAAAAAGTTTTGGGAGGCAAGTTGCAG
ccaaaaaaaggctaaaaaagggttttttggactttgttgaaAACTGGATT
AttaatttttcctgattttttgcatgaaagtagggtaccatcatcgATAA
ATGATGGTTGAAGCAGATTTTCACGAAAATGTTTTCTTGCCTCAATAATT
GAATCTTTATCCAtaaaaatcactatttataagcatgcATTAatgttttt
agtcaaattactcaattttttgatgagatagatatttcttttcctttcaA
TCTCCTCTCTTAAAACCACCCCAATGGACACAGAgacaatcaatgataaa
aacaaaggacgaattttaataaatcgtcactatttgtgttctgaatgatt
gttttacCGTCACACTCAAGTAGATATTATCAATTATATATAAATTTGCG
ACCGTCGTGACCGCAAGGTTATGCCACCATCCTATGTGGATTTGTGATAC
TTTTCAGATTTGTTTACCTcttattattcgtttttttAACTAATTTATTC
TAATAACATTtatattgattttaatgtttatCTCTTGGTCCAAATATATT
Gtatttaaaagtcaaagaaaaaatatatatttgttaaatgcatataacca
ggtactcttaggtgccaaatcccggggggggggcagctgggcaaaaggac
cgacgggtatgtgcgggtcctaagggtgcCTTTTCCAACTGTAAGGGTCG
ggaaaactagagatgcactgtaagggtagaaatttttaaaatgggGATAA
AATTAGAGTCGATTTCCCAGTTGGGCTTCTAATTGTAGGATTTTTTCTCA
CCTGCATGGTTCGAACTTTTAGTCAAGTTTTCCATTGGAGTCTGTTATGC
ATGGTTGTCTATGTACAAGCTTTTTTTACGAGAACAAgtgttttaagcct
aaaatgttcttaacatgttcttatttttaccattttttgagtatttttgc
ctattttcttaagaaatggGGTGTTTTAAGGTCTGCTAATCTTTAAAata
ttgttcttaacattttggccatcaaagtgttatgttcttatattagtttg
ttcttttaaaaaataatcgtgttttcattcaaaatcgAGTCATCGAAATG
TCCTTGGAAATAAAAATGtgcattttttcatttttatcaaacaggAGGAT
GGTTATTAATAGGGAATATAACACTGAACGATCAAAATCAAATCGGGTCA
GTCTATGACACGTACATTGCCAATCCACCATCTCTCCATCAAATACAACC
AACCCAAAATGAACAATTCCTACTTAACCACAACAAtgttcaaagtcttt
ttcaaaGTCATGGATACAGTGAAGTACGAGTGAAATGCTTCAAACCCTGG
CATGGTAGAACGCTTGATGCTGTGTTGTACGGAACCAAAACATACCAGTT
TATCAATAGAGAACAAAATGTGATTACAGGAATGTGTGGAAATGTacgat
ttttggaaaatgatAATTCATTGATTTCAAGTAAACCTTGTGAGCAACAA
ATTACTGGTACCGACTGGGAAGAAATACATCCTGGAATTCTCTATTATGA
TCATACACTTAGGTCATAGATACAGCACATGTTATATTACATTATGAAAG
ATTCGAATGTGACGATTGGAACCCACAAGCGAATTATCAGTCCAAAGGAA
ACTGGCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00026366TCONS_00026366Clytia hemisphaericatranscript
TCONS_00026367TCONS_00026367Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00026367-proteinTCONS_00026367-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000570supercontigsc0000570:252..10608 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06	0.1	0.03	0	0	0	0	0	0.03	0	0.03	0.05	3.34	4.38	1.58	1.32	0.08	0.13	3.15	4.12	0.45	0.4	0.51	0.67	0.15	0.65	0	0	0.12	0.12