XLOC_014840 (gene) - C. hemisphaerica

Overview
NameXLOC_014840
Unique NameXLOC_014840
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000571:113604..121573-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014840 ID=XLOC_014840|Name=XLOC_014840|organism=Clytia hemisphaerica|type=gene|length=7970bp|location=Sequence derived from alignment at sc0000571:113604..121573- (Clytia hemisphaerica)
TTTTTTTCTAGTGATTAAAACACAAAACTTGATGAACAGACGATAAATGA GTACTATTGTGGCGGGATGAAGAATAAATGATGTAAAACATTTTTTCTTG CAATAAGAACAATAGTTTGAGTCAATATGTCAAATTCAAAAAGTTCATTA TCACGAACACCAAGCACTGTGTCAAGTGTTGAATATGGCAATGACCAAGA AAATTGCTACCCAAGCGATGTGGAGCTTGGACCCATCATTACAGCTTTAA AGCTAGGCACATCTATGAGTCGTTTCAAAGTGAAAGGCAATAGGCCAGAA CAAAAGACTTTTCAATTGGATTTGGAAGAATTCAAAATATCATGGTTTCG TGCAGGGACAGGAAGAGAAGAAGGGAAAAGTAAGCTTTCTGCTATCATGT ATTAAGTTCTTCATTTTAAGACTATTATTGAAAATTCACAAAAAAATCTG AAAGATTCAAAAAATCATAAACAGCATTTATTTTAGTACCAATTCAGCAC AGATTTCTCAAATTTAAATGTCTTTTTATTTACTACTTTTTTGATATTCA GTACACAATGAAGATTTTTGAAATTCTTTTTAGCGTACCGCTATTTCACT TTGAAATTTCCCCTCTGTTTTTAGATGAATTAATTTTGCAAAGTTTCATA AAAAATTAGCTTGCTTTAATTTTGTAGTTTTCATTGAAGAAATCAAGGAA ATAAGAAGTGGTGTGACATCAAAAGATTTTGTTAACTTTTTGCGTAAAAT TGAAGACCCCAATAGCTGTATTGTCATTGTATATGGAAGCTGCTTCAATT TGAAAACATTATCATGCATGGGTAAGAAGTTTCAAACTCAATTTCTGACT TTTTGATAATTATTAAATACTAGAGATTTTCACTTTGAAGTTTTATTTGG TATATAGTGAGTGGAATTTCTTATTTTCTGTTCTAATTTAAAATTTTTAT AGCTCAAAATGTGAGTGAGCGCAATTATTGGATGAAGGGTCTTGTTTATT TGAAATTTCGCAATCAATATGTACCGACTGTTGCACTCACCCAAAGGTAA GTTGCAACTTATTTTTTGTTTTTTTTTCTAAGTAAAAATAAGTTTACAAC CACAGTTGAGGGCCCCTTTTTAGCTCTCTTCATGATGGTAGGAGAGGGAG ATCATTTTTCTTGATTGCTCCACTTACCCTTGATCTTTCTCTTAATTGCT GAGCATGAAGCAGAGCTAAGTAAAAAGTCTTTGGCTTGACTCGGCTGGGG ATTGAACCAATGATTGAACCTAAGGTCTTGCCTGCCCTTGAGCACCATAA CCATAACATTCAAACTACTACTGCTGCTACTTGTAAATATAATAAAGCAT ATGGTAATCAGTTCTGTGAATTCAGAACTGAATATCAACCTTGAGTTGAC CCAAAATAGATGAGGTCAACTTGAATTCTTGTTTTCTGCAATTATGTTTA TAAAAAGAGGGTTTATTATTGTCAAACCTTTCAAAGAAATGAGACATGAG TGAAAATTAAAACCTATTTTTCATTATTATGATTTTACTTTTGAACAGCT TGATTTTTATGAAACGATTCATGATTTGTTTTTTCAAATTGATTTGAAAA GATCTCAGATGGGCCATACCATATGCTTGTTTTTAAATCCAAAAAATCTA AGCAGATTTTTTTCTCTTAGAAAGAAAAAATATCAGTCATTAAATGGAAC CAGCACTTTACTTTTTCTCTGTTTTCTTTTTAAGATATTTGACATTAGAA AAATGCTTCAAAAGTTCACCCTTCTCCTCATTATTTAAATAAGTACCAAA ATATGATTTCTAATAATGTCTATAAAGATAATTAATTCTTATTAGGAAAT AATGATTTGTCAGAATTGCTTCTTTTATACAATGTTATTTTAATTTTTGC AATACTTTTTTTTGTAAGCATAACGTTATAAGTATACTTAGGCTCAAACT TGGTGAAAAATATGCATAAGCATACCTCCAAGCTGAAATGCAAAAAAATT ACTAACCTACTTTTAAAGCTGCTTTAGCCTTCTTTGAGAATTTTGCTAAG AATACTGAGCCTCGACCTATTTTCCTGTATGCTTATAAAAAAAGAATGTA TTCTAATCAGTATAAGTATCAGTACAGCAAATTTCAATCTTAGACACCCA CCCACCCCTATAGTACAAAATACTATCCAGCAAACTACACAATACACCCC AACAACCCCTGTATAGTAAAAAGTACCATACAGAAAACTCTCAAATATAC CCTAACACCCCCTGTATAGTAACAACAAATTTACATCAAAAGAAACACCC CCAACAATATGTTGAACGGTGAAGAAGAATGCGGTTATTATATTTTGATT TTCCCCGACATGTTTCGGACTCTGTCCTTTCTCAAGGGGATGATATTTCT ATAGAAATAATTACTATACAAAATTATTTGACGTTAATTTGGACAAATAG GTCACTTTAGGCAGTTTAGGCTTGAAAATAGGTTGGTGTAAATGGGGCCA TCTGATGAGTTGATTTTGGTCTAAAATGAACGTGTAGATCAGACTTAGGT GCTCAGTTGGAGAAGATTGAGTTCTTGGTTCAATCCATTAGGTGTGAGGA TTCTCAGTTCTTTGATCCAGAAGTTTTCTCTCTGTAGTATTATCCTTTTC ATTTTTTCAATATCTGTCTCGTTGTCAGGTATATTACACAGATATTGCTA ATTAAAAACAATTAAAATTAGAGAATGTTTACTAGAGAATAAATCAAATT CAGGACATGAGAACGTAATTAATCAAAATTCCAATAGAAAAAGAAGGCTA AAAGAGGCTATAATAGGAGGCAAGACGATATTTTTGTACACAGACCCCCC CTCCTGTTCTAATTCCAATTATCTGTGTTAGGAATTCATCTATGTGATGA GAAAACCTGGTTCTTCCTTCCACACTTTTGAATTTATTCAAAAGATATGT TAAAACTCTTTTATATGGAAATGTTATTACACACAATCTTTTTCAAGTCA ATTTTGTAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNACATCAAAAGAAACACCCCCAACAATATGTTGAACGGTGAA GAAGAATGCGGTTATTATATTTTGATTTTCCCCGACATGTTTCGGACTCT GTCCTTTCTCAAGGGGATGATATTTCTATAGAAATAATTACTATACAAAA TTATTTGACGTTAATTTGGACAAATAGGTCACTTTAGGCAGTTTAGGCTT GAAAATAGGTTGGTGTAAATGGGGCCATCTGATGAGTTGATTTTGGTCTA AAATGAACGTGTAGATCAGACTTAGGTGCTCAGTTGGAGAAGATTGAGTT CTTGGTTCAATCCATTAGGTGTGAGGATTCTCAGTTCTTTGATCCAGAAG TTTTCTCTCTGTAGTATTATCCTTTTCATTTTTTCAATATCTGTCTCGTT GTCAGGTATATTACACAGATCTTGCTAATTAAAAACAATTAAAATTAGAG AATGTTTACTAGAGAATAAATCAAATTCAGGACATGAGAACGTAATTAAT CAAAATTCCAATAGAAAAAGAAGGCTAAAAGAGGCTATAATAGGAGGCAA GACGATATTTTTGTACACAGACCCCCCCTCCTGTTCTAATTCCAATTATC TGTGTTAGGAATTCATCTATGTGATGAGAAAACCTGGTTCTTCCTTCCAC ACTTTTGAATTTATTCAAAAGATATGTTAAAACTCTTTTATATGGAAATG TTATTACACACAATCTTTTTAAAGTCAATTTTGTAAATTCTACAGGTGGC TTTGTAGAGAGTGGTCTGGCCTGCCCAAAAACAATCAGCAAAAGTAAGAA AGTTTATTTCTTCTTATTACTTTAAGCTTGTTAAAAATTTGATGTTAAAG CTTTTAAAAAGGATATGAGTTGCTTCTAGAGTGAAGCAGGCTTGTCAATA AATCCTACTTCGAAAGATGTTGCAAATAAAAGTCATAGTCAGACAATATT GGGGCTCTTTAATGTCAGTAAACATTTTAAAAGTTGTTATTTAATTGACA TTTTTAAAGTTTTGTTTCAAATATTTTGCGGATGACACCTTTCCAAATTT CCGTTGGGACTTAATTTCGCAGATGAAACCCAAATCCGCAAAATCTGTTT GAATTAATCTATCATTAAATTAAGTTTTTCTCACAAATAATTACATACTG TTTTCTCAACCCAGAATGTCAATGAGGGAGTATAAAATGTTTTTGCAAAG AGCAAACATCAAACTAAGTAACAACAAAGTACGAGACACATATCAGGTAA GAGATACTAAAACACTTTTAACTTTGTAAACCTTTTTAAAGTTCAATCTT TATCTTCATTATAAAAATGCACTTGTATGACAAAATGTTACCTACATTTC AACTTCTTTCAACAGTTTTTCCAGATTGAACAAATTGAATTGCCTATATT TTTGTAAAAAAGGGCAACAGTTTCTTCTATTAAGGCAAGGATTTCATTTG TATCCAGACTGACCTTCAGAAGCCTTCCAGAAGCTTAATATTTGTTATCA TACGTTAGCAAATGCAATAACGAGGAACTTATTTTCCTTTTCACTTTAGA AAGTTCTTACCCCTCGAAGTAGTGGGATAGATGCAACAGGTTTCTGCCAA GCTTATTACAATTTACTGCATCAGTCGTCTGTAAGTGAAAAAAGTTTCAT TAGAATTTATGCTATCTAACCAAAGTTTTATTGAAGTTAGAGCCTATATC TTTTACAATTCCCATTGGATCACTCATCATCATTTTGATCATATTATTAA CCATGGAATTTCAGTTTTAACTCAAGTTTAAGGTTTTGTTTTAAACAAGA GTGATGCTTACTCATCAACTTTGATTTACAAGCTTTTTTATATTGAATTG ACAAGGGTCTGGAGCAAGATTGGTCAGAAAGAGAAAAATAAAAACCTTTT TTTGCTCGTATCAGCACAATATAACAATAGGAGACACTGTCCTGATATGA AATGTGTCTGATATGTATGAAATGACGAACACCTATGTAAAACTAAAACC TTTAAGCAATATTGGGCTCTAGATAAGTTGAAAACCTGGGTATACATTTA TCTATTTTGAATTTTGTATTCCTAGATTGCTGAGAAGTATGAACAATACT TTCGAAAAGTCAACGACGAGTGAGTAATTCTTCTACATGTTCATTTCTTG GAGTTTGAAAGCATGCTGTTAGATTCTGGCAGATTATTTATGTGGTTGAA CTTCACTTTAACTAGTGAATTGATTAATTGAGTAATTCCCAAAATTCCCA AAATGTGGATGAGCCCTGATTTTTGAAAATCAAATTCAGATCCAGCAATA TCCTGGAAAATAAATTTCTGTAAAATAGATTTTTTTCGGGACTGTAGAAT ACACAAAACTTAACATTGTTGAATGTTTTCTGTTGATTACAGGCAGGCCT TTAAAAGTATCACTTGTTTTTTCTAGGCTGGTCATGTTTATGTCTGATTT TCAAAGATTCTTAACAGATGTACAAGGGGTAATTTTTTCATGTGTTTTCA CTCCATTGATATTTACAACGGTTCTTAAACTGTTTCCAATTATATTTTAA TTTACAAATTCTCATGAAAATTTTCCAGTTTATTGGCAATTTTGATACAG CTACTGTATCAAACCTTGCGCTAAAAGCTATGTGAAAATGATTACAGGCT TAGAGCTTGCCTTAAACCAGATAATAAGGAATTATTGAAAAATATAATTT GTGATTTAAACTTTTAAACCTAATCTCGGCGTGAGCAGGGCTTGAAATAA GGATTGAACATCATCCATCCCAAAAATCAATTTATAATTTTTTTAAACCT ACTTGAAATCGTTATATCAAGCCATAGTGAAGGGTTACTAAGTATTAAGG TACTAAGGGTTGACAGATTTTATTTTCCTCATTAGGACTATCGGGCACAG CATGACCCTCAATATGCGCGATCAATCATGGTTCAGTGTATCCCAGATGA AAGTCTATTCAAAGGTTCTGAACCGTACGTTGATATGAAACAGGTAATAA CAAGAACTGTTTTAAAGTTTACAAATTACTGGTTAAATATGCAACAACCA ATTCGGAGTAAATTTTGAACTGGTATTTTTGTCAATTCAAACTAGACGTA GAGAAGAGGGAGTTGCGGTCAAAAGTATGAAAAATTACTTTCAGAAAGTG CTTAAAAAGGTTTAAAAACCTTTATCACATAATTACAATGTATAGCAATG TGCCCTCCCGGTTATTACCATAATGGCTTTATGGCAACTCCTGAACTGTG GCACAGGATGTACGGTTACACATTTTGTGGATTGCATTGTGGAGTCACAA GAGTGCTCAAACTGCGAGCAGCGAGCAATGCATAGTTATAAATAACTATA ACAAATCTATAGGTTTTTCATTTTTTCTTTATTTTCAGTTCATCAATTAC CTGTTCAGCCCCATGAACAGTGCTTTCAATAACAACACAGCTTACGACGA AAGCAATAAAGTTTATCAAGATATGACCAAACCACTAAATAACTATTGGA TTGCGTCTTCCCACAATACGTGAGTAGAAAATTATTTTAGTCAAATGTTC TTCTACAGTGGACCATTATATTTTATTATTTCGTGCAAGGTTCATTTCCA GCGGGTTCGTTTTTCCAGGGGGTAAAAATTTATTCTAAAATTTCCAGAGG GTAAAAGACCGAAGAATCGATATTAGTTCGTCCACCTTCACTTTTAAAAT TTCCCAAGGTTTTTTTTGCAAATTTTGCCATTTTCCAGGGTATATCCACA CATTTCTAACAATCTATTTTTACCTCTACAATATTGAATTTGAGCATTGG AAATCCCAAACTTACTCAGCATCATTGTAGAGAGGGGTCTGAGGAGAGCA ACAGAAAAAACAAGCATAAGGGGGTAAATTTTCATTTACCTTTGGGCAGG ATTGTAGTACAAAAACAAACATGATATTCTCCACAACAACCTTGAAAGAA ACTTTTGACCCTTTGCTGTATAATGCTGATCGACTGAAGAAAAGTCATAA AAATAACAAAATGANTCCCAAAAATCAATTTATAATTTTTTTAAACCTAC TTGAAATCGTTATATCAAGCCATAGTGAAGGGTTACTAAGTATTAAGGTA CTAAGGGTTGACAGATTTTATTTTCCTCATTAGGACTATCGGGCACAGCA TGACCCTCAATATGCGCGATCAATCATGGTTCAGTGTATCCCAGATGAAA GTCTATTCAAAGGTTCTGAACCGTACGTTGATATGAAACAGGTAATAACA AGAACTGTTTTAAAGTTTACAAATTACTGGTTAAATATGCAACAACCAAT TCGGAGTAAATTTTGAACTGGTATTTTTGTCAATTCAAACTAGACGTAGA GAAGAGGGAGTTGCGGTCAAAAGTATGAAAAATTACTTTCAGAAAGTGCT TAAAAAGGTTTAAAAACCTTTATCACATAATTACAATGTATAGCAATGTG CCCTCCCGGTTATTACCATAATGGCTTTATGGCAACTCCTGAACTGTGGC ACAGGATGTACGGTTACACATTTTGTGGATTGCATTGTGGAGTCACAAGA GTGCTCAAACTGCGAGCAGCGAGCAATGCATAGTTATAAATAACTATAAC AAATCTATAGGTTTTTCATTTTTTCTTTATTTTCAGTTCATCAATTACCT GTTCAGCCCCATGAACAGTGCTTTCAATAACAACACAGCTTACGACGAAA GCAATAAAGTTTATCAAGATATGACCAAACCACTAAATAACTATTGGATT GCGTCTTCCCACAATACGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00026433TCONS_00026433Clytia hemisphaericatranscript
TCONS_00026432TCONS_00026432Clytia hemisphaericatranscript
TCONS_00026431TCONS_00026431Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00026431-proteinTCONS_00026431-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000571supercontigsc0000571:113604..121573 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.56 3.47 2.1 2.05 14.3 12.25 10.91 13.52 8.87 10.87 7.54 6.17 11.49 11.86 7.92 9.74 12.16 12.58 8.7 11.75 11.29 10.7 4.46 8 13.85 13.64 9.96 7.7 8.56 8.62