XLOC_015050 (gene) - C. hemisphaerica

Overview
NameXLOC_015050
Unique NameXLOC_015050
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000587:156437..160087-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015050 ID=XLOC_015050|Name=XLOC_015050|organism=Clytia hemisphaerica|type=gene|length=3651bp|location=Sequence derived from alignment at sc0000587:156437..160087- (Clytia hemisphaerica)
CAACAGTCCAACTTCAAGAATTATTGGTGGACAGGACTCATCTGTGGGGA
GATGGCCCTGGCAAGTCGCTGTTAAAGAGGAAAATGCAGGACCTGGCCGA
GGTTCATTTTGTGGTGGCACCTTGATTAGTCCAAAATGGGTACTCACTGC
AGCCCATTGTTTCAAAACACGCACGACTGCCTCAGTTGTTTTAGGTAAGC
AACATTCTTATTCAATATCTGCTCTCCTAAAACAAATTCCTACATGATGC
AAACAAATTTTGTTCGAGTAGAAAAAAAAAGTGTAAAATCTTTGCCTTGT
CCGGGTGGGGATGGTTAATTTCGTTCAATCAGTGTTACTAGTCGCTATTA
TTTGACAAATTAACCTTCAGGAACAAATTTCAGTTAAATCGAATGAGTCA
ATCAGTCAATACAAAAATTTTTTAAATCATCTTCAATTTCGGAATACCAC
TGGTCAAAGTTTCAAGGTCATACCACTTCTCAATCTTACCGTAAAATCCA
CGTAATAAAGTCTCAGTAATCAATTCAGTCTTAATAAGTCAATAGTCAAT
AATGTCAATGCCATTTAACAATAACCCTCCGCTTCATTTCACTCCTTCAC
GCATTTATCAGCGTCATTTTACATGTATTCTTCAGTGCCAAACAATAAAT
CTCCCCAAATAGGGAGAACCAACCTCGATCAGAGGCAGTTTGAAAGACCC
TTTTCGTTTCTCTGTTTTTCATATTTCGTTCAGTAATGCACAACATGTGC
CTAGTGGCTTTCTACAGTTGATCACGTGATATTTATCTTGAAATAATTAC
AGGTGAAGTAGATTTCCGGATTTTGGAGCCCTCAGAACAGCGAAGAAATG
TTGAAGAAATTCACAAACATCCTTTGTACAATCCTGATGTGAGTCAAGAC
TATGATTATGCTTTGCTTGAGCTAGAAGAAGCCGTTGTAATAACTAGAAA
CGTACGGCCAATCTGCTTACCAAGAGCCCGTAGGTTTAGAGACACGACGT
TCGATGGAAAAACATGTACGATTACCGGTTGGGGAGCTGTAGACGTTACG
CCGCCTGACAGTCCAGACGGTGAACCAACGATTGAAGGAACACCGGTAAA
TTTATTTTGGTATCGGGTACAGCCGACTTTCTCTAATTCGATCTTCAAGG
GCGGATAAAGAATAAAGATTTTGATTAGAACATTTTACATCTTTTTCAAG
CTGAGGAACTACCACAATATTTTAGATCGAATTACAATAGACGATATCGG
CTTTCCAAATTCTCCCCGAATGATTACCCATGATGCATTGCGCAAATAAA
TTCACAGACGATATCGACTTTCCGCGAATTTTTTCCGATATCGTCTGTTG
GTAGAACACTTTATTGTTGTTGACAATTATTTTCAACTTATTTGATAGAT
CGAATTACAGAGAGATTCGAATAATAGAGGCTCAAATTACAGAGAGCTGA
CTGTAATCCTTTGTTTGGAGAATTCTCTAAGAAAACAGAAAACCAACTAC
CAATTAACCATTTAAGTGCCACTGTGACATCATATTAGATCACCGGCACC
CGGTAGGTCTGGATCTAGAGGAGCTCCATGACCCATGTTTCCCTGTTTTT
TGACCCTACCCAAAAATAAAAATACTTAGTCGAAATTGGCGTTTTTTTTA
AAGAAAATCCAGTCAATGATCTTCATCCGAAAACTTTTATTTTTGAACCC
CTGAGAACCCGGTATACTCCCTCCCTTATAAAGCATTAGCCTCATTCGGT
CATTGGACAATTAAGTCTTATAATCTTTCCCATACCTTCNTCGAGTAGAA
AAAAAAAGTGTAAAATCTTTGCCTTGTCCGGGTGGGGATGGTTAATTTCG
TTCAATCAGTGTTACTAGTCGCTATTATTTGACAAATTAACCTTCAGGAA
CAAATTTCAGTTAAATCGAATGAGTCAATCAGTCAATACAAAAATTTTTT
AAATCATCTTCAATTTCGGAATACCACTGGTCAAAGTTTCAAGGTCATAC
CACTTCTCAATCTTACCGTAAAATCCACGTAATAAAGTCTCAGTAATCAA
TTCAGTCTTAATAAGTCAATAGTCAATAATGTCAATGCCATTTAACAATA
ACCCTCCGCTTCATTTCACTCCTTCACGCATTTATCAGCGTCATTTTACA
TGTATTCTTCAGTGCCAAACAATAAATCTCCCCAAATAGGGAGAACCAAC
CTCGATCAGAGGCAGTTTGAAAGACCCTTTTCGTTTCTCTGTTTTTCATA
TTTCGTTCAGTAATGCACAACATGTGCCTAGTGGCTTTCTACAGTTGATC
ACGTGATATTTATCTTGAAATAATTACAGGTGAAGTAGATTTCCGGATTT
TGGAGCCCTCAGAACAGCGAAGAAATGTTGAAGAAATTCACAAACATCCT
TTGTACAATCCTGATGTGAGTCAAGACTATGATTATGCTTTGCTTGAGCT
AGAAGAAGCCGTTGTAATAACTAGAAACGTACGGCCAATCTGCTTACCAA
GAGCCCGTAGGTTTAGAGACACGACGTTCGATGGAAAAACATGTACGATT
ACCGGTTGGGGAGCTGTAGACGTTACGCCGCCTGACAGTCCAGACGGTGA
ACCAACGATTGAAGGAACACCGGTAAATTTATTTTGGTATCGGGTACAGC
CGACTTTCTCTAATTCGATCTTCAAGGGCGGATAAAGAATAAAGATTTTG
ATTAGAACATTTTACATCTTTTTCAAGCTGAGGAACTACCACAATATTTT
AGATCGAATTACAATAGACGATATCGGCTTTCCAAATTCTCCCCGAATGA
TTACCCATGATGCATTGCGCAAATAAATTCACAGACGATATCGACTTTCC
GCGAATTTTTTCCGATATCGTCTGTTGGTAGAACACTTTATTGTTGTTGA
CAATTATTTTCAACTTATTTGATAGATCGAATTACAGAGAGATTCGAATA
ATAGAGGCTCAAATTACAGAGAGCTGACTGTAATCCTTTGTTTGGAGAAT
TCTCTAAGAAAACAGAAAACCAACTACCAATTAACCATTTAAGTGCCACT
GTGACATCATATTAGATCACCGGCACCCGGTAGGTCTGGATCTAGAGGAG
CTCCATGACCCATGTTTCCCTGTTTTTTGACCCTACCCAAAAATAAAAAT
ACTTAGTCGAAATTGGCGTTTTTTTTAAAGAAAATCCAGTCAATGATCTT
CATCCGAAAACTTTTATTTTTGAACCCCTGAGAACCCGGTATACTCCCTC
CCTTATAAAGCATTAGCCTCATTCGGTCATTGGACAATTAAGTCTTATAA
TCTTTCCCATACCTTCTTAGACTCTCCAGGAGGCTGAGGTTGAGGTCATC
ACACGTGAGCAATGCAGTCAATCATGGAACCTATCACCCCGAATGGTTTG
TGCTGGTCCCACACGTGATGTCGGAACCTGTTTCGGCGATTCGGGCGGTC
CTTTACAATGTCGAGATGGGCGTATATGGTATCTTTGGGGCGTTACTTCA
TTCGGATCAGAATTTTGTAGAGAAAAACCAGGTGTTTTTGCATCTCTCAA
GAATTCTGGTGAAGATCGAAATGAAATTCTGAGTTGGATTGATGAGGAGA
TTAATGGAAGTGGACCAGTTTTACCTGGAAAATAGTTTGTCCTGAAGAAA
A
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00026793TCONS_00026793Clytia hemisphaericatranscript
TCONS_00026792TCONS_00026792Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00026792-proteinTCONS_00026792-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000587supercontigsc0000587:156437..160087 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.06	0.07	0	0.71	0.31	0	0.35	0.05	0.06	0	0.04	1.12	1.45	0	0.07	0	0	0.31	0.97	0	0	0	0	0.06	0	0	0	0	0