XLOC_015490 (gene) - C. hemisphaerica

Overview
NameXLOC_015490
Unique NameXLOC_015490
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000630:135940..139717-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015490 ID=XLOC_015490|Name=XLOC_015490|organism=Clytia hemisphaerica|type=gene|length=3778bp|location=Sequence derived from alignment at sc0000630:135940..139717- (Clytia hemisphaerica)
GAACGATGTCACTTTCACCGGAGCAATGAGTGGAGAAGTTTTTATTTGGA
ATTCTCATTCTTTATCACGTATCGTGAAAAATGTTCATTCCGGTCCTGTT
TTTACCATGTTCACAACTGTTAAAGATGGCCTCATCGTCACCGGTGGTAA
AGAAAAAGGGTATGACAAATATCTTGTAACATGAAAGTAATCTAATGTCA
TTGTTAATCAAAAGCGTTGAACTGAAGGATCATTTTATAGCCAAAGGTTC
AGGCAGGAGTCGCTTATTCTCTGGATTTCTTCTCTAAATCATAACCCTTC
GTGATTGCATACTTTACTTAAGCAGCATTAAGCAGAGTGGTGTCATGGGC
TATTTTTCTTTCCTAACAATCTGTTGGGGTCTGAAGGATTGATAATAACC
TAAAGAACTCATGACAGACTAAAGAACCGATGCCAGGCTAAAGGACCGAT
TATAGGCTATTTCGACTTGACGATCTCTTTGTTTTTTGGACCTACCCCGG
TGGAGGTCCTATAAATTAACCTTTGTCCGTTCGTCTGTTCGTTCGTTCGT
TCGTTTGTTATTAGCTTTCCTCAAGATTGACTCGTTAGTTTTTTCTGATT
TTTTGCACAAAGATGCATAACTATAAACCCTCGAATGTGACGGAGCCCGA
CTTTCAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTGTGACGGAGCCCGATTTTCAAAA
AAAAAATTTTTTGGGCAAATTTGGGCCAAAAAACGGCTAAAAAACGGGTT
TTTTGGACTTTGTGAAAAATTAGTTCGTTAATTTTTTCTGATTTTTTGCA
TGAAAGTAGGGTACTATCGTAGGTAAAAGATGGCTTAAGCGAATTTTTGC
AAAAAAATTTTATTGGCTCAAAAAACGCATGTTTATCTATAAGAATCACT
ATTCATAAGCATACATCAATGTTCTTAGTCAAATAACTCAATTTTTTGTA
TGAGATAGATGTTTTTTTTGCTCACGAAGGCTTACTTTTAAAGAATATAT
GTGTTTAGACATGTTTTCATAGAAAAGCTAGCCAAATTCGATATTTTTTT
ATAAGCACACTATCAATTACTTAGGTATTAGCTTTTCTCGAGATTGGCTC
TTTTATTCTTTATGATTTTTTGCACAAAGATGCATAACTATAAACCCTCG
AATGTGACGGAGCTCGATTCTTGGAAAAAAAAAATCTGGGGTAAATTTCA
GCTAAAAAGAGATGTTTTTTTGCTCTCGAAGTCTTGAATATGAAAGAATA
GAGCATGAAATTTTGGTTTCTAAACGTGTTTTTTTATAAGAAACAAACGA
CTAATTTTAATAGATCGTCACTATTTGTGTTCTGAATGATTGTTTAATGG
TCACACTTATGTAGATATCAATTATATATGTGTTAAATGCATAACCAGGT
AGGTCCATAAAAGTATCACTTGTTCTTTTCAGTTCTGACGGTAAAGATTG
TACGCCAGTCAAGTTATGGGATCAAGAATTGAAACGATGTAAATCATTCC
AAATCGGAAAACCAACTTCCATCAAATCTGTCTGTAGAAATACGAACAAG
GTATGTCTTTCATTACACACTTAATCAACCTTTTAAGCATGGGGAGGCTG
GGTTCGAGTTTACCAGGGAGGAATGCTGTCAAAATGTTTTGAGTCATTGT
ATTGACATCCTTACAGACAAAATTATGAAGGTTCATTGAATGAGCACTCG
AAAAAACCAGGCGTTTCCAAATAATTCATACGAAATAAAGCATATTTTTA
TACCATCCTTCCTCTTTGGTTTCAGAATAAATATTTTCGGACTTTCCTTC
TCATGTGTGGATGAAATATTTGAAGCATCCATGTTGTCTAACGGTTTACT
TATGTTCTTAGGGATTGATTCTGGTTGGTACGATGGATAACGAAATTTAC
GAAATCAACGAAAAGAGTGGCAACAGCAAAGTAAGCTTCTTTATTTCTCC
TTGGATTCCATGAAGTATTCCTAAGTTAGGTGAAGTTTTTAAAAAGGTCA
TCATGAATAAATTTGCCCTTTCGAGAGTTGATGGGGAGATATATTATTGT
TAGCTAAGTTTCCTAGGAAAGGGTTTTTTTTTAATGTTCATACGTTCTGT
CAACGAATTTCACCTAACAATCCACATTCTGGATTCTTGACCTTGAAAGA
CTGGATTCTCGGTGTTCGCGGTGTAGATGTGCTTTCTCATTCTGCAATAC
AGTTATACTAAATCGGACCTGAAACAACACAGAAAAAAGCCAGTATTCTC
ATAAGCCAGCCATTTGTCTTTATTCCACCAACAGGCGATTGTTGAAGGAC
ATGGAGACGGTGAGATGTGGGGCTTGAGTTCTCATCCTTCACAAGAAATT
GCTGTCACTGCCAGTAATGACCAATCAGTCAGAGTATGGGACCTCGCTTC
CAAGGTTGGTTCTCTCCAAATTCATTCTTTTAAGGGGCATCATTTAACAG
CATTTTAAACAAAAGAGAAAACGTTAGGAGCTTCGCGCCTCGCGAGTATA
AATTTTGAGAACTTCTATTGTTTATTCTGCATTCTTAGCATAAAGACCTT
TTTTGTATATCACGAAAAATAATACGTTTAAGACAAATTCAAAACCCTTG
TTCTGCCTATATGTATTAAAGAGTCTGGGGCGATTAAGTAGAATTTGCCT
GTATACCAGTGCCTGAGGAATTTTTAAGCTAGTTTTGTTTGTTCTATTAG
TTTCGAAATATCCGTTCGGAGTATGAGATATGTACACCTCCTTTTGCGAA
TACCTCATTAAGAAGGACTTTATTGCATATAAGTTTTATCGCTAAAAGTT
ACAAACGGGAATTTCATGAAACAAATTGAAATTTTAGATTTTGTTTCAAT
TCAATATTACACGGCAAACTTTGACACAAGAATTTAAAACCCATGGCATT
CTTTCCTTTGTAGCATATGCTTCGTAAGGCAGACATGGGTTATCCAGTCA
AATGTTGCTGCTACTCCCCCGATGGTGGTACAATTGCAGTTGGACTCAAT
ACGGGTGAACTTCAACTCCTTGACGCAGAATCGTTGAAAAGCGTTGCTAA
GAAACGAGATCGCAATAAACCAATAACTGTTGTCAGGTAACGAGGCATTC
GATTTCCTAAATCTTTCATTATTATTACTTCAGTAGATTCTCTATTACCC
AAACCTGTCTCCTCGACTTGAACTATTTGTCTACCCCTTTCTCTTCAGCT
AGCAAATCCTAATAAACCAGTCCCTGAATTTTGATATCCCCATAACTCGA
ACAAGATTTCGTACCTCGGTCTATGGTGTTTAAGGTATCCAAGATATTTA
AGAACCCTTTTGAGATAGTAAATCAATTCTCAGCATCAGCTTTGTAGAAT
ATTCTCAAGGAATTGTTTGATATTAGATACGCTATTATTGTTTCCACTTT
ATAGCAAAAATTAGTGCACTCCTCGAATAGTCTCCTTAATTTTTTTCTCA
GTTTTTCTGGTGATGGCAAACTTATAGCGGTCGGTACTGAAGACAAATCC
ATCGATTTCTACTCCGTTAAACCAAACATCAAAAGAGTTGGCTACTGTAA
AAATATACCTAGCTATGTTTCCCAGCTCGATTTCTCAAGCGATGCCAAGT
TTATCCAGGTAGGTGAAACAATTTCTTAATTTTATTGATTAAGGAGGAAG
GATTTCGGTGCAAATAAGGCTACTGCCTGGTAAGAGCACAATCTTCTGAT
GATAGGCAATCTTACTTACGGATCGTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00027487TCONS_00027487Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00027487-proteinTCONS_00027487-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000630supercontigsc0000630:135940..139717 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.56	15.56	10.51	11.62	31.13	25.45	13.55	14.56	13.49	14.82	13.22	10.79	9.88	9.15	11.6	19.63	12.47	11.39	7.52	9.43	10.48	10.44	10.7	10.93	9.75	10.39	10.18	12.78	13.2	11.58