XLOC_015977 (gene) - C. hemisphaerica

Overview
NameXLOC_015977
Unique NameXLOC_015977
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000670:151472..155144-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015977 ID=XLOC_015977|Name=XLOC_015977|organism=Clytia hemisphaerica|type=gene|length=3673bp|location=Sequence derived from alignment at sc0000670:151472..155144- (Clytia hemisphaerica)
GTTAAAATTATCTTTTTCTTTGCACACCTGCATATTTGAACTATTTTTGC
ATCTTGTGGCTCCACACCTCAGTTTTGAAATCAAAAAACAAATATCACAG
CTAGTCTGGATACTAAATTGAATTTTTCTTTTGTAGGAGCCAATCAGAAA
CCAGAATGAGATTATATGGACAATACTAACAATAGCTTTAAACCAAATCC
TTTTGTTTTTTACAGTACAGAGGTTTGGAAAGGAACTTGCTCACGTATTT
AAAAACAGAAAATGACATTTTGGTTAAACACTACTCATCACCACTGCATA
CGATACGATTCAAAAGCTTTGACACTTTTCATTCTTCTCACACTGTCGAT
TCTTCATTTAATTTAATTGTGTCATCATGGAAATCGATATGGTACGTAAA
TCATTTTTATTCGGCGTTTCCCACATTTTTGCTTTCGAGGGATTTTCTGG
GTCTTTTAAAAGTCCTTCGAGGCGCTTCTTATTCTACACTCTTCTGCGTT
GATTGCATCGAAATTTTAATGTGTGAAATTAGAGATTTTATTTGTTTTTT
GGACCTACCTGGAGGTCCTATAAATTAACCTCTGTCCGTCCGTTCGTCCG
TTCGTCCGTCCGTCTGTTACCAGCTTTTCTCAGGATTGNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNAACGCTATGTTTTCTGACTGATTT
TTTTCATTTTTCTCCTTGCATTGCTATCTAACTTTCATCATCAGGTAGGT
CCATTCAGCATCTAGCTTGTTTCTTTTACAGGGTGAACACGCATCTATTC
TTTACGGAACTCATTACCCGAACAAAATCTTTGTCGGATGCCTTCCCGCA
AGANCTTTTATAGGGTGAACACGCATCTATTCTTTACGGAACTCATTACC
CGAACAAAATCTTTGTCGGATGCCTTCCCGCAAGAGTAAGTCAAATAATG
CATATTTTTTCTAATTATCCTTTTTGGGGGAAGATAGTCGGGCCGCATCA
CAGGAATCGAGAAAAGTGATGAAAGTAATAAAATCAAACCAAGCCTTATC
TTTTTTTTCTTCCTCTCACATTCAGCACCAGACTACCTTATACTGAAGCT
TTTTTATGAAATTAAAATTTGAGATACCGTTTTTTATTAGGGAAGGATAA
ATTTTATTTCGTGTAGCAAAACACTGTTTTTTGAGCCTCTAGATGGGTTT
GTCTTGAAGGCTTCGAAAGTGTTTCAATTAGTGATGTTTGTCTGGTTTGT
AAACTTTTTATTTATTCTTTAGATAACAGCTGCTTCTCTCGGCGAATATT
TTGGCTGTTTTGGCGAGGTCATCGAGGCAAAGGTCGTATTAGACGATGCC
AAGAAATCGAAACGTTTTGGGTTCGTGTCTTTCTCCCGTGCTACCGATGC
CAAAACTGTTTTATCGGCTGGAGATTTTTACATGCTGGGAAAACGCATCG
TTGTTGGACCTGCTGTAAAAAGAGAGGTTGCTATGATTTTTGCTTCGTTG
ATCTTTCAAATACACTTGAAAAGTCATAAGGGGTAAATTACTCTTTTAAA
GGCCCTTTACGCTATGTTATGTCAACTAGTTAGTTCTCCTCCGTGTTTGC
CCTTCGAGCATCTGGGTTCTAGTTTGGCTGAAACCAAAACATCAACCGAT
TTTTTTATATCTAAAATTTCTATGACTGTAATAATGATGATGACTATAAT
TTATAACTTTTTTATGTTATTCAGTTCAAGGAGCGTGTAGCAGACGAGGC
CGTAAAGATCGTGATGGCGCAGGAAGCGGTCATCGAACACAATCCGCCAA
GGCGTTTTGTTTACCGCCCGTTGAAACAAGAAATAGATGATCTTCCAATC
CCGCCACAACAAACACCTCAATGCCCTCTTCCAGCGAATAATGGTTCATT
TTACTATCCATTATTTTTCGATCCAAATTTCGGATTTTTCTACCATTAAA
ATTGTTTTTTTTTATTTTTTGTAATTTTTTTGTTCTTTTACAAGGTTTGA
TGTAGTAGGTGTATTTAAAACTTGTATACGTTTTTAATGATGTTTGTATG
TATATTTTAAGAGTATTTTTATTGTCCTATGGTTCTATATTGTCCTGTAA
ATTGTTTANTTTAATGATGTTTGTATGTATATTTTAAGAGTATTTTTATT
GTCCTATGGTTCTATATTGTCTTGTAAATTGTTTAGGTTTAGTCTTACCA
CGCCCATTTATGTAGATTTACTGACTTTGTAAGTAGGAATATTTTTATCG
ATTGATGCAACATACACGTTTTTTATAAGAACAAATCATAAAAACACAAG
GCTTCAATGGTTAAAATATTTTAATATAAGTTAAGAACATATTTTAAGGC
TTCACAGAAAATTTAATAAAAATACTCAAAAAATGGTGAAAATAAGAACA
ATTTTTAGACTTTAACTCAAATAGGTAAGAACATCTGAAGGCTTCAAAAA
TGTAGGATGTCCGTATAAAAAAACGTGTACATTTATTGACACATTGCATG
TATTTTATTTTTGTTGTACTTTGTAAATTGTTTAGTCTTACCACGCCCTC
GACCACGCCCATTTATGTAGATTTATTGATTTTGTAGGAAGTATATTTTT
TATTGATTGATGCAACGAACATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00028223TCONS_00028223Clytia hemisphaericatranscript
TCONS_00028222TCONS_00028222Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00028222-proteinTCONS_00028222-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000670supercontigsc0000670:151472..155144 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.04	0.07	0.14	0.95	0.65	7	10.06	10.25	15.64	18.34	9.82	7.28	7.1	1.12	0.71	0.58	0.36	0.37	0.3	0.19	0.15	0.23	0.12	0.44	1.44	0.07	0.25	0.19	0.05