XLOC_016183 (gene) - C. hemisphaerica

Overview
NameXLOC_016183
Unique NameXLOC_016183
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000691:117366..124312+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016183 ID=XLOC_016183|Name=XLOC_016183|organism=Clytia hemisphaerica|type=gene|length=6947bp|location=Sequence derived from alignment at sc0000691:117366..124312+ (Clytia hemisphaerica)
CGACAGCCTTTGAAGGCTTGATTTATAtatgtaatttatgcaatgATTAA GCTGCGCGCCTTGTTCGCCAACCATAAAATGCTGACTTTACAGTTAAATG CCTTGATGCAAATGACCTTACAACCAAAACAACCTGAAGGGAGTGTCCAA TCAAAACTTTAGTTTTGCTTGCTTTTAGGTATAACAGTTTGCTTTTTGGG TGTTATTCACTTGTGTGCCATACAGCATTTCAATTAAATTTaccttttta caaattttagtttttttaaatgaatgaTAAATAAGAGAAATGAATAACCT TGAAGAACCAGATGAAGCAATTGAAGGGACTTATGGTGGACCTTACATGG TTGAGCAAATCATAGCCATTTATGTTGGAAAGGTAATTTTTAGTTATAAA Tacgtaccgtcaactgctctaacttgggacgattggtcaaaacatgggac tgttgatatctggcctgaaTTTTCAATTATTGTTAAATCTCGTTGACAAC aaatttatcaatcatactttctgtcataatatGTCACGATAACTTACACT GATagtgcgccctttttaacttttttgtttacattcaaAATGACTGAACA CCGATTGGAGAACTAGAGAATGCCCATCGCCTAACcacctatcgcccgat gggattaacaaacaACGAGTGTGTAGCTTGCCGCACGAGTGACGTCAATT GCTCCATCactttgccactaatttgttcttcttcgttccaggcGCTCGCG TGtattccactacagatttttttcatatttcaatttcaaagcgTATCGTa atttggtctaatgtcgacatcccttgtctaattccgacacccttctttaa agataggaataatatgaaaatttgaatcactgattgaaaaaggattattc ctctctgaccactaagcaaagaaaaatagtttcaacttttctatcaattt cagcttaTAAAatgggtgtcagaattagacgagggatgtcgacattagac caaattACGATACGTAGATGCtcctaaaaattattttaaaggtgtCCCAT AAATACCCCGCAttttggggtaattacgggacacccttggggtaattatg ggacaggtataaaatgttattgaaaaatccagatatctttccaaaaggCT ATGATATTTGAGGTTTTGCATCCACTTGATGACTTCAAATCCAANTCCCA TGTTtggtcagatagtcccaagttagcagttgacggtaaattttcaaaaa aatgaaaaatgctctGTGATTTTAGCAATCATCAAACATGCCAATGTATT GTAACCTTGGTTGTTTTATGGACCACAAAGAGGGTCTTTCAAAAGTCCAA TTCTAAAGGTCTAAAGGTCCAGGTCTTCCCCAATTCTAAAGTCCTTTTTT ATAGAAACTTTTTGGTGTTTGGTTTGATGTTTTGTCACTATTTTTTATCT AAGGgcctattttttttataaagtccATCAAAATGAGTTGCTAAGATTTA AAAAGGCCATGATAATTTCCAAAATAGTTTAAGTCCAGTTGGGGTCTGTA CTAAGTTGTAGAGACCACTGCCGGGTGGGTGGTCAAAATtggcaagttaa gaacaatttagtTCCACGTACTACTATTCTTTCAAAAAGCTAATTTTCTA CTTAGTACCTTGTGTAATTCTGGTCTAAAAATGCAGTGATGACCAAGAAT TTTTGGGTCGGCGAGAAAAGAGTTGATAATAATATAATACCTCATTATCT AACAACATCTTAGAAAAGTTTTTGCAAgggaatttaaaaatatataacac tTTTGGTACTGCGCTCTCTTTGAACCATATTCGGGAGAATTATATATGTA AAATATGTGCTTTTAGGGTGATACTTTGCTTTCCCGtcaaattttctgga ttttacTGGGTATTTCCAGGTAGTTTTGGCGTGGTCTATCTACATTGAAA ACATAATATCAACTCTGTACCATAGTACAGAGATGACTTCTTTCCCAAAA ACAAGTTCGTACACATTTCTGGCACTGGTCCAGTAGCCCAACTATGTACC CCCTactaaaagtttttaaattgtGTCCTTGTCTATCTTATTGAGATTGT CTTTTCTGTCTATCAATAACTATTTTATCATTCCATAATAGGACCGCAAA AAATATTATCGTGTGAAATGGGTGGACAGTTGGGAACCCGAAGACAACTT ATCAGAAGCTTGTTCTGCACTGATTGATAATTTCTGGTCTAGTTCGGCAC GTGATCAAACAGGCAAAGAAGTCAATAGAACAGAATTAAAGGTACTTATT AGTGTACTACAGTTTTATTATATCATTAACGAGAAGGTTGACATCTAAAT TATTGTTTTAAATGAGGGATGGTAAATGCCTttccaaaaaagtaaaaaaa aaatttcgtgcCTAGACCTATCGAAAAtactgtaacttggtctaatgtca acatccctcatcTGGGTGAATTGCAGAAAATAGTACAATGTCCCGTCCGC ATCAGGCACTTTTTGAGGACCCATAACTCAACTTTGGCAAATGCAATTTC TAAGAACTTCACATTTTTGTGAACTCTACTNTTGAAGTGAAGAAAGGCAA AAATTTGCACATTTTCGCTCTCATGGAATAAAGAATTGTGTTATTTTAAG AATTCGACGCTCAAATCGATCTGTCATTTCCAGATTGATCTTTAAAAGAT AATTGGTAGACCTTAGGGCCCAAAcagaaaatattcttttggcaagtgtt ttaatgatttttagctttttgattATTTAAATCAAANGGACagaacaaaa agtttttcactCATAGCTAGTACATGTAAAGTCAATAAAAATGATACTGC TGCAAAAAGCATGTGGTTCCCTATAGTTCATTGGCTTGATACAGTTAGAA CATTAAAGTTGtctcaaaaaaagagaaattttaaGACTTTTGTGCCGTTG CGGACGGGACAAATTTTTGGACCATATTAGTTTTTAccagttaaaaaatt aaaaatagattATTTAAAGGCAATAAATGTCTTTAACGCAAGAAACCATT TAATATgtcacaacaaaacaaaaatggggGTCCTCTAGTTCGCAGATCTT GACTTGTAAGCATAAATGGAGCTTTTGTTGCGGATGGGACATTGTACTAT TTTTCTGCAATTCACCCATCTAATTGAGACACCctttttagagttgaaaa taatataaaagtcgaaaatatttttctcttcttcacTAAGTCAAAGATGA Aagatcctttttcaatcagtgattccaactttcatattattcctacctct aaagaagggtgtcggaattagatgagggatgtcggaATTATGTCAGAATT AGATGAGAGATGTCGACATCAGAGCAACTTACAGTAAAAGGATAAGGTTG AAGTGAAGAAAGGCAAAAATTTGCACATTTTCGCTCTCATGGAATATAGA ATTGTGTTATTTTAAGAATTCGACGCTCAAATCGATCTGTCATTTCCAGA TTGATCTTTAAAAGATAATTGGTAGACCTTAGGGCCCAAAcagaaaatat tcttttggcaagtgttttaatgatttttagctttttgattATTTAAATCA AATAGAATACAATCTTCTGATGAGAAAACATGTATTCCtgatatgcatca ctgcaatgtcttcgaTATCACACCTTAGACCTAACagtgattggttgtaa gtgacgtaaaatcggtcaatacgtcacttgcaaccaatcagctgttaggt ccgtgatgtaatgttagaagacatcgCAATGGTGCATAGCACCAAACTTA CATTTTGGTTCAGATTTTTTGGCAGTTAGTTTTCTGAAGTTTTGCCTGAA AAGGCTCATACTGACATCATCAGCAACTTATAAAAAcctttgtaactttt gataggttAACACgtattcaaaagtttttttatcaattctGCTTCCATTT TTAATGTGAGGtggaaacgaaaaaaaatttgaaaatagaaaaatattgat aatataTCAGGTTgatatcttttcaaataaaacatttttttgtctaACTT TTGTCTAGGCTggtcaaaaaatcatcaagaaaGAAATCATAGAATCAAGG CTGAACAATGAAAACAACCCTGACTCGCCAACGGAAAGTTATATCGGTAA CAATAAAGTTGTACCTACACTCAAGTCAGATATCAGTGCACATAAAGATG AAATCAACGTTCAAATACCATCAACTTCTggtgagaaaatcaaaaaattg aaacaagaaCTCATGTCACCTACTGCTACTACTTTCCCCGATAAATCCCA AAGTGTACCACCTGATTTAGGCAAAATACAACATGAActattatcaaaat caaaaatagaaGCTCCTTCAAAACAAGCCGATAAGAAAGTCAACAATAAT GAAAGTCAACAAATAGTAAAGATTCAAACAACGTCTACCTCAACTCAAGC AACAAAAGATGTTCACCAAAAACCACAAAATAAATCACCTAAACGTAGAT CAATAGATTGTCAAACACAAACTGACCCCGTCCTTGATGATATCATTGAA TTTGATGATCCTCCACGTGTTTTATCACCTGTCCAACACCACTCTATCAG TATTGGTACAGATCCACCAACGGCAACACAACGTTCAACAAACCACACTG AACCATTCAGTAATAGACAACCATATTCAGATTCAGATTCTGAGAAAATA GTGAATTTCCAAGATGGAAGAATGGGTAATCAAGAAGGATACAGCTCACA GAATCTTAATGATGAACTTCCTTATCTTAATGATGAGCTTGAACAAACAA TTTACCAATCTCAACCAAATCCCCCGACTCAACGATCAATCAATGATCCG AATTTCCCTAACCAACAGAACCTCAATAagcaaagttatcaatcaatcaa cgaACCAAGCCATCCAGGTCCACCAAGCATTGATGCGTCTGATGAACAAT CAATGGACGAGAGTGATATTGTAGACCTAGCCAGCGAAGAAGACGAACTG GAAATCACATTCTCCTTATCAACTCCACCAAGTAAACGTCAATGTCTTGA TAAGAGTAAACAAAAACAGCTTCCGGCAAGCACAAGTCGACTGGAGAAAA GAACTCGTGAAAAAGTTACCATGAGACGTCGCAGGAATAGTGATAGCGAG AGGAATACAAGTACAGCTAATACTGGCAATAACATGCCTTTACTTCATCC GAGAAGCTTATTATCAATGTATCCAAATGGTCAACAACCAACTGGCAACC AAGCTCAAAATACAATCAACAATGCATCTAACTCACCACAACAAATACCC AACCAAGAAAACCTCCAAGCACAAACAACACTCAGAAGAACTCTTATTCC CAGCAACACTGGAGTAAACAACAATATACAATCCTCGAACACTTTACCTG GTGCTAATACAAACCCAGTTGCTAAATTAACTGACAGGACATGTAATCTC TGTAAACACACATTCCCAAATTTAACATTAGCTCGTCAACACATGAAAAA GATGCACGCAACGCCTTCATCGACCGCCACAAAccaaataaatttacaga ccagaccaacaaataatgtaaacaataATCCAACCCAATCACCACAGCAA CGTTCATCAACAACTGTCCCTACCAAAGAACTCTCCTGTACCGTTTGCTT TGGTCTTTTCCGTAATAATCGCGACTTAAAATCACACATGCTGCTTCATA CTGAGAAAAACATGCATCAATGTGAAGTTTGTTTGAAAGCTTTTCGTCAC AAGTCCACACTTGCACAACACATGTTGATCCATACCCAAGAACTACCTTT CGAGTGTAAAACTTGTGGTCAAAAGTTTCGACAACGAGGTCATTTGATTA CACACATGGGCAAACATACACAAAACAGTGAAGGATCTCTCCATTGTCCG TATTGTTCACTCATCAGTAAAGACATCAATGAATTCCGAAACCATGTTCG CTCACATGAACAAGAATTACCTTTCAAATGTAGTCAGTGCTCAGAGAGAT TCCAAAAACGCCATGATTTATCGTTACACTTGGACGCACACAACGAAGGT CGTCCTTTCACATGCCCCATATgcaagaaatcttttaaaaccaAACCGTA TCTTTTCGGGCACATGCAAATGCATAAATCGAATGATGTCATTCAAAGAC CTCAGCAAACTAATAGACCAATGCAGCAAAGTCATCCACAATTTCAACAA TCTGGACATCAAGCTCAGCATCCTAATCACCAAGCTCAGCATCCTAATCA CCAGATCCAACAACCAACTCAACGAATAAATCAGCAATTAAATAGAAACA CAACTTCACCCATGTTATCTACACATCAAGCACAACAAAGATCACGGCAA CAtcctcaacaacaacaacaaagtcCGATCATCAACAACAATAATAGTCA ACAAAATAAACTGTTGAATCCTTCTCAAAGATTGCAACAACAGAGAAAAA ACAGTTTATCAAACCCAACACCTCCTCAACAGACACAACCTAAGCCTCCT ACTACAGTCTCAGTGAAAACACAATCTGAAAGTTAAAAGATTCTTTGCAT GTATGTATCTAGGGATCTTTGGTTTGGTTGTATGGTATGTATTTTGCTGA GATTCTTGGCTGGACGTTACCTGATTTTCTTCTGTATATTCTTTTGAAAt gcatttgtttttatttaatgaTGGCTTTGTAGGTTTTCATTGGCTGTGTT AGATTGTATTgtatttgtttaaaattttgtttctttattTATTAGCGATG ACTACCTTAAATTGGGAAAGTCCCTCGCCATTTTGGGGTGCTTTTTCTTA GTCTGTTTCCTTACCGAATATCGAGTTTAATTTGcagttttcttttaatt taaaccaaaaacgtctttttttcttgattgaGAGGTTGAAACGAGGATGG CGAAAATAACAAGCATCGTAACACCTATGATCTGCCAAACGAAGGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00028548TCONS_00028548Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00028548-proteinTCONS_00028548-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000691supercontigsc0000691:117366..124312 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.25 14.56 15.02 14.16 16.3 12.98 13.82 14.46 6.23 9.14 8.44 5.05 5.7 5.61 4.95 6.7 7.35 6.76 2.92 3.18 6.17 4.99 9.28 10.64 13.42 12.79 1.65 1.28 6.69 7.91