XLOC_016554 (gene) - C. hemisphaerica

Overview
NameXLOC_016554
Unique NameXLOC_016554
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000725:16623..20767-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016554 ID=XLOC_016554|Name=XLOC_016554|organism=Clytia hemisphaerica|type=gene|length=4145bp|location=Sequence derived from alignment at sc0000725:16623..20767- (Clytia hemisphaerica)
GATCTGAAATGTTCTTTTTTAAATATCATTTCAGTATGGACAAAACTCCA
GAGAATTCAACACAAACAAAGGACAAGGAAACCCCTAGCCCAACACTAGA
TGACTTAGAGAGAGCCCATGAGGAAGAACTTCAACCCCCGACAAAGAAAC
AGAGATTTGAACCGTCTTATGTGGATGACACAGAATGGAGTTTGCCGGCC
GACATGGCAGATTATTTCGTTAAACAGTGTTCGAACTTCATTAAACCAAC
TGAGATCGAGGAGCACATTACGTCTTTTTGCCCTCCTCCCAAAAACATTG
GCAAGGTCAAACTACTAGACAGTGCCTTCAAGGAAATTCTTTATGAGACC
GGAAAAAAGGCTATCATTGACCAGGATGAGGTATTAATGAATGTGCAAGC
CCGTATTTGGGACGTCCTAGGTCCCTTCTTTCGATTGTGGTTAGGGATGG
AGACGGACAAGGACAACCTAGAGTCAAGAAGAGTCAACATCAGAGGAGAT
GAGGGAGGGCATGGCAAATGCCTCAACTCTCTATGAGAAAACGGTAACCC
TGATTGGCCAAACGGTCAACAATCTCCTATATCAACGGCACTTCAATGCC
CTCAGTGCTCTTTTTAATGACAAGAAGAAAGCCAAGTCCATGATCAAGGA
ACTCAAAGAATTAATAAACAATGATGATACCTACCTATTTTGGGACAAAT
TTGAGGAGAAAGTGATAAAAACACAAAAGATGAAAATCAAAACAAAACAA
GCCTTGAAGGACAATAGTAACCAACAACAATCAAGAAGGACCCCCTCTCG
GGGCTGCCTCCTTTCCAACCGATCGAGGGGAAGGGGGCGTGGAGGTTTTA
ACTCATACTATCGATCTTTCAAAACAGACTCAAGTAACAACAACAACAAC
AGTAACTTTAGAGGCAGAGGTAAGAACTATTTCTCAACCACTGTTTCAAA
TAGTACTCAACCAAAGTTTAAGGTATGTCCACCCAGGGGTTCGATGCCTA
TTTCAAGAGGATCCAGTCCAGGTCAAGGGATTGGCAGGAAGGTTAGGGTC
CTTTCTAGAAAATTGGAAACAACTCACCAAAGATCCTTCTATTTTAGGCC
TGGTTCAGGGTTATCAGATTCCCTTTATACACAAACAGGGTCCATGGCAA
GGGGTACCTCCAAGGGAGTTAAGAATGAACAAGGTGGAAGATCAGATTGT
TACGGAAGAGGTAGAGAACTTGTTAAAGAAAGGGGCGATAGAAGTGACCT
CACCCTGCCCAGGCCAGGTTTTAAGCACTTTGTTTACAGTGAAGAAGAAA
GACAAAGGTTACAGACCAGTCATCAATTTAAAATTTGTAAACTCACATAT
CCCCTATCAACACTTCAAGATGGAGGGTTTGCATCTCATAAAGGATCTCT
TAAACAAGGACGATCTAATGATAAAACTGGATTTAAAGGATGCATATTTC
AGCGTTCCATTAGGTCCAGAGTCCAGGAAATTTGTCAGGTTCGAGTGGAA
AGGCAAACTTTACCAATTTCTGTGTATGTGTTTCGGGCTTGGTCCAGCTC
CAAGACTTTTTACAAAAGTTCCTGTGACTATTTTGAGGAAACTCAATATA
ACATTCTAGTAATGGGCAGCTCTATGTCGGAAATTCTGATGGCCAGGGAC
ACTTTGATTTTTCTCCTTCCGAGTCTGGGTTTCGTGATAAATATTCAGAA
GTCTCACTTACAACCATGCCAGGAGATAGAGTTTTTGGGGGTGATAGTCA
ACTCCTCCAAGATGGAATTGACTTTACCATCATATAAAGTAGAAAAAATC
CTAAATCTATGCGAAAAACTCTTGTCTCAGAAGGTGGTCATTATTTTGGA
GTTAACAAAACTTCTAGGGAAGCTAACTTCTTCAGCAGTAGCAGTGTTAG
CAGCGCCTCTACACTACAGAAAGATACAAAGGAGTCAAATAAATGCCCTT
TGGAAGTCTTAGTCGTATCACACCAACATTGTACTCCCCGAGGAGGTGAA
GTTAGAACTGAAATGGTGGTTGGAAAACCTGAGACTCTCAAACGGGAAGT
CCTTGTTGACACCAGAACCAGACCTAGTTATGTCAACAGATGCCTCAAAG
AAGGGCTGGGGAGTGGACTGTCAAGGTCAAAGGACAGGAGGCCCTTGGAA
CCAGGAGGAGAGTGGCCTTCACATAAACATTTTAGAACTGAAAGCAGCCC
TCTTGGGGATAAAAATTTTTCAATGAACCAACCAGGGATTCGCATATGGA
CAATACATCAGCCCTTTCTTACATTGTGAAGATGGGGAGGGACACAGAAC
AAAGTGATGATAGACTTGAGCCAGAAGTTATGGGATTACTTGATATCCAA
GGGGATCACGATTACTGTAGAGTATCTCCCAGGGAAGTTAAATGAAACAG
CAGATTGGGAGTCAAGGAATGTTCAGGATTCCAGCAAATGGAGATTAGAC
CGGAAAGTTTTCAAAGCAATTTGTCAAGCTTTCGGGATACCTCAGATAGA
TCTGTTTGCGTCAAGGGTGTCCCATCAAGTTCCTTGTTACGTGTCATGAA
AACCAGACCCCTTTTGTCAAGCGTGGATNTAGATCTGTTTGCGTCAAGGG
TGTCCCATCAAGTTCCTTGTTACGTGTCATGGAAACCAGACCCCTTTTGT
CAAAGCGTGGATGCCTTTCAGACAAGTTGGGAAAACAACCTAAATTATGC
CTTCCCACCGTTTTGTCTCATCGGTCGGGTTCTGGACAAATTAGCAAGGG
AGCCAGCAGAAATGATTCTGGTGACACCTCTATGGCAGGGACAACCTTGG
TATCCCTGACTCTTACGGATGTGTGTTCAACCGCCTCTTTTGATTCCTTC
GTTTCCAAGCCTGTTGTTGGGCCCTCAAGCTCAACTGCATCCCCTGATGA
GAGAAGGGTCTCTAACTCTAGCGGTCTGGCGTGTTTCAGGAAAACCTTGG
AAACAGAAGGCATTCCAGGCAAAGCAGCAGTCCTTATATCAAATTCCAGG
AGAAAAGGTTCCATCTCTCATTATGAATCGGCCTGGAGAAAATGGGCTAG
TGAACGACAAGGTGATCCCACTTCATGTTCTTTGTCTCTGATTCTAGAAT
TTCTGGCAGATTTGTTTGAGAAGAATTTGGAGTACAGCACTATTTGTGGA
TATAGGTCAGCAATTTCAGCTTATCATAATCCAATTGAGAGGCCGTCATC
CTAGAGTTAGTGCCCTGTTGACGGGTGTCTTTAATTTAAGGCCACCCCTG
CCAAAGTATACGTTTGTATGGGTGTCTCTGATGTTTTGAATTACATTAGA
CAAATGCCGGTTGATGACTCGATCTCAAATAAAGACTTAACCCTAAAACT
GTCATCGCTTTTGGCTATCGCATCAGCTAGTAGAGCGTCTGAGATCTGTT
ATCTAGACATTAGGTATTTGGTTAAAGGGAACGATTCTTATGAGTTTCAC
TTCGTTAAACTCACCAAGTCCTGGAGGAGAGGCAAACCAAGACCAAAAAT
ATGTTTTCATTTCTTAACAGAAGAACCAGAACTTTGTATTTGTAAGACTA
TAGACCAGTATTTGACAAGATCAAAAGAATGGAGATCAGATCAGGATACC
CAACTTTTGTTAAGTCATATAGAACCCCATGGCCCAGTGGCAGTGGGGAC
TGTTTCTAGATGGCTAATGGAACTGTTAGGTTTTTCTGGTCACTCTACTA
GACACGCTTCTACTTCCGAAGCTAAATTAGTTGGGATACCCTTAAAAGAA
ATTGTCAAGAGGGGTCAATGGTCGTCAGATTCTATGTTTAGGAACAGATA
CTGCCAGGAGGTTAAGGTTACAGAAAGGTCAAGGGCATACGAAAATAAAC
TGTTTAAGAAAGCTTTGAACAAGGAGGAAGTGACGGCTTCTAGTTATGGA
TACAAGTATGTCGCTTAGCAGGATTAGATCTAGCGAGATTTCACGCTGTG
AAATTTGGAATTGTGCAAGGGCGCGAAGCGCCCGCAGTGCAATTCCGATT
TTACTAGTGAAATCGAAGCTAAAGATCTAATCCTGTCCTCCCTCCCTACC
CTACTTATCATAACCATTATTATGTTTCATTTCCTTCAGGTGGTTTTCAT
CGTGGACGACGTGGTCGTTGGAATTGAACAACGCATCATTTTAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00029112TCONS_00029112Clytia hemisphaericatranscript
TCONS_00029111TCONS_00029111Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00029111-proteinTCONS_00029111-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000725supercontigsc0000725:16623..20767 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.39	0.44	0.14	0.06	1.98	1.66	1.78	1.76	0.83	1.45	1.25	1.15	1.4	1.7	0.93	1.49	0.91	1.18	0.85	0.36	0.52	0.94	0.77	0.62	1.75	1.91	0.83	0.62	0.4	0.35