XLOC_016574 (gene) - C. hemisphaerica

Overview
NameXLOC_016574
Unique NameXLOC_016574
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000726:7576..13682+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016574 ID=XLOC_016574|Name=XLOC_016574|organism=Clytia hemisphaerica|type=gene|length=6107bp|location=Sequence derived from alignment at sc0000726:7576..13682+ (Clytia hemisphaerica)
AAACTACCAGTTTGGGGAGGTTCACTGAATCATTCTGGTCAAACTCTTAT
ATTTTCGGACACTTGCTTGGTAGACAGCTGGATCACTCTTTTGAAAATTG
CCTTTTTGAACTGGCCACATCTTCGTACCCACAAGTCCTTTCCCTCCAAA
ATGCAACAAGTAATGGAACTGGTAGATGCAGACCTTTACGATGAAGTCAA
ACTCAAGTTTGCAGTTTGGAATAGTATACCTCTTGATAAAGGAGCagtta
atttttttggaaatgagcGAGCAATGTTCTTAGATCATTTATTGCCGCAC
GATTTCACAATCGAATCGGTTTGTTCTAGTGAGATATGCCCTCAAAAGGA
TTTGACAGTACGTTGTTCGGGCTACCCAACAATCACTAATGCCTCTCACT
CGCACTTCGCTTTACCTCACACTCAAATCATCATTTGGTTTTTTGAGGAA
GAGTCTGTTCGTCAGTGTGGAAGAAAAATGTTGCACCCTACCAATGATGA
CAATACGTTTTGGCAAACTAATACCGAAACAGGGTAAGCTAATGAAATAC
AGTACACTTCTGGTTATTGAAAACTCGAAGCTCCAAGGGAGATGGGAATA
TTTACTTCAAATAACTAAAAATCTCTTTCCTGTTAGATTTTTCACTGGAA
AactatataccttatcggctctTTTTACGCCGGTCAATATTGGCGTACTT
TTTCGTCACTGACTTAATaaaggccggtgtaaaaagggccgataaggcaG
CAGATTTAAATCTATCAAGTAATGATATTAGTATCGAAGAAATAATGTCT
TGCAAGGATTTCTTAATTAGACATGGTTTTACTTTAGACAACGTTATCCC
TTCTGCAATGGCAGCCGAACTCACTTTCCAAGGACCTACAACGAAATGCC
TGCCCTTGTTGCAGTTTCATTAGATGATGATATCAATGAAACTGGCATTA
ATATGATACCAGTTGGGAGTATCCCAGACAATTTTCAACATGAAAGTAAT
GGTAACAATTTCAAGTAAGTTTTAAATGTTTGACATTTTAACAAATATTA
GATTTTGCAAGCACGGAAATTTGTggaattgatttttaaaattgtataga
tttaacttttaaaaatatcacGTGGACAAAGTGAAATCAAATGTCCATAT
ATAGTATTTAATTTGCGGGCGACAagtttgaaaatgtaaatttttggtGA
AAACTAGAGGGGAATGAAGGNATGAAATACAGTACACTTCTGGTTATTGA
AAACTCGAAGCTCCAAGGGAGATGGGAATATTTACTTCAAATAACTAAAA
ATCTCTTTCCTGTTAGATTTTTCACTGGAAAactatataccttatcggct
ctTTTTACGCCGATCAATATTGGCGTACTTTTTCGTCACTGACTTAACaa
aggccggtgtaaaaagggccgataaggtagcaGATTTAAATTTATCAAGT
AATGATACTAGTATCGAAGAAATAATGTCTTGCAAGGATTTCTTAATTAG
ACATGGTTTTACTTTAGACAACGTTATCCCTTCTGCAATGGCAGCCGAAC
TCACTTTCCAAGGACCTACAACGAAATGCCTGCCCTTGTTGCAGTTTCAT
TAGATGATGATATCAATGAAACTGGCATTAATATGATACCAGTTGGGAGT
ATCCCAGACAATTTTCAACATGAAAGTAATGGTAACAATTTCAAGTAAGT
TTTAAATGTTTGACATTTTAACAAATATTAGATTTTGCAAGCACGGAAAT
TTGTGGAATTGATTTTTAAAATTGTATAGATTTAACTTTTAAAAATATCA
CGTGGACAAAGTGAAATCAAATGTCCATATATAGTATTTAATTTGCGGGC
GACAAGTTTGAAAATGTAAATTTGTGAATGAGTGAAACGGTTTCCCAAAA
AGGCAACAACTCACAAAAGAGAAAATTCAATTCCGAAGCTGTGGGAAATC
TGATCATATTATTCAATACTTTTTAATCTAGTTTTGCTCTGATCGGAATG
ACCTACGTTAAACTTGCAAAgaaaaaagacaacaaaaagCAACACGTAGA
CGACTTCAGAAGAAACCANGGGAAATCTGATCATATTATTCAATACTTTT
TAATCTAGTTTTGCTCTGATCGGAATGACCTACGTTAAACTTGCAAAGAA
AGAAGACAACAAAAAGCAACACGTAGACGGCTTCAGAAGAAACCGAGGCC
TTCACTACGTGTGCAAAATCAAGCACAAAGATTCATGGTATCTGTATGAC
GGGTTAAAACCGCACGTGGAGCCCACCCATAAAGAAGCTTCATACGCAAA
CTTTCAAATGACCTACCTCCTTTATGGTATTTTTAAAATTAGAGGCTGAT
CTGAAttagcaattttttatttgattttaaccAAATCTGCTTTTAGGGCG
GTAAAATCTATCTTGGTAAACTTTCGTGGTTTGTAGGTTTATCGGTGTAT
TTGTACCGTTTTTGGGTTCTAGCTTAAAGGAGACACCTCTTTTGAGTAAA
CCGTGAGCGTGGTCACTCAAAAGAGAATCTCACCCCAGTTTCATAGAAAG
ATTCAAACATAAGCACTTTGGTATTCGGTATTCTTTAGCCTTTGATTTAT
ACAATTTctctatttattttcttttagtgATACATTCGTCAACAGGATCT
ACCAGTGCACATTCATCAACAGGATCAACCAGTGTAACGAGTAAATACAT
ACCCTCTGATAACTTTGCTACTTGCATCATATGAGATTTTTCGGTCCTGA
ACCTGTGGCCTTGAATCCCGTGATCCCTGTTGCCCTGCTTTTTGACCCCG
CCCtaataaaaaatggaaaacaaaTTCTTTTTACTTAGGACGTTGCATTT
TAATCCGGAAAATATTTGAAGGTGCGGGCTGATGGCATTTTAATGTTGCT
TTAAGTTGCTTTTACTTTATTTTCTGAGAGGGTTTAGGTTTATAATTGAA
ATGATGAGCTTTTCACGACAGATTTctcatgttttttgaaaattcagtgt
aatcaaattttgtttaaCGTCCAATTCATTTATTTCATTCTAAAAGTTCT
AAAAGCTATATTTTGGGCGCACTTGTGATGGGTTACCAAGTGCTTTTCAT
AACGTGACTTTTGACCTAACATACTTGACTATTACAGCTTCCACTGACAA
TGACTGGACCATGACGTTGACTTTGACAATGATTTTTTCAGACGATAACT
TCATTTTCAGAGTTTGATAAAAACTCGTGTATGTTCATTTCAATCTttcg
ttgttgtttttttatacaTCTAAGTCTTAGAATTTGAGTTGTCTGGTAAC
TTGCTAAACGAAACTTTGAGACTTTGGTGAGTAGTGAGATGAATTCAGGA
AAATCAAATCACGCAATTAATGGACCTATTCTAAAACAACATAACATAAA
TTTTGCAAGACTGACGAAACAGGCTATTAATTAATTTACTCTCCATTTGA
TACATACAAATTTTAAAAAACCTTAACCTTTTTTTTCTGATGAACGTCTA
AGATCTCAAATAAAAGTTGATCTGAACCTCCTTTGTATTGATAAACCCCT
TTCTTTTATTCAGCCCAACCCCCTGATTTGCTGATTTCAGCGAACAATGT
GCGGGTAAGTAGTTTATAcataatttcctttttttatttttctcgatGTT
GTCCAACTCAGGCCCTTTAAGTTGTTCTGAaacgaaaattttattttccc
tcttttttaaGATCTCTCTGGTACAGTCTAAAAAAACACCGACAGAGTTA
TATGTTCAATGAAAAGGCCTCACGCATCAATCAACACTTTTAAANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTTGAAAGTACCTCTGTAGTGGAGGGTTTCATTGTGCAATATAGTTAAA
ATACGGCTTGAACTTTGAACATTCTGAAATACTGAAGTTTTGGTAATTCT
TTCGTGCATAGAGAAAAGACTACAAATATATCTTTCACTATTGAGTTAGT
TTTGAATAGCCACCTGCTTGAACTACTCGCGTACAAAAGTTGAGATGAAA
AGCTCAACGCTGTATCCCGCGGAGGTGCCATTTTATGTATTTCTTAGCGA
TTTTCTCCACATTAATGAAATTCTATGTAAATATTTCACCGACTTGATGG
GTATCATTGTAACCATATTAAAATTCTATCTTTTTCCGTTATGAAGccga
aaaaatttctaaaaaataattttttttgaaaaagtaatgatgtttcaaaa
atggttagtagaatcgactttttttccgaaaagaaaTCCACTTAAAGGGC
CTGAGAATGTTGTTACTTTTTATCGTTTCCTATGTTTAATGATTGATTCC
CTCCCTATATAGTATATAGTGTAATAGAAGGTAAGATTAACTATTCAATA
TTAGAGAATAACTGTATAACCTATTTTCAAATCCACAGTCTGAAAGTTCA
AGCAACCTAAAACACTTAGCAGGCAACGCGAAGAACCCAATACTtgtgta
agatttttttttgtgtattGATTTTTCCTTTTAGATGCTATCACATCCGA
TTATTGAATTCAATATCTTGTGCAGCTCgcgcaaattttgaataacatcg
gttagattttgaaaaaagactgcttccaaaaactaataaattgcAAATAT
ATTTTGTGATACTTCGGTTTATTGTgataaatcaaatttctttcgTTTTC
TTCTAAGCGAAGACGCAGTATCAACAGCAAATATTCGAAATATCAACGTA
CAACAAATGATCAAAGGTAATTTACTATTGCTGTTATTGCTCTTATTTTT
ATCACAAAGGGTATAAGAGTACCTTCTTCNAAATATCAACGTACAACAAA
TGATCAAAGgtaatttcttatttttattataaaggGTATAAGAGTACCTT
CTTCTAACATTGTCGTGATATATTTGTCCTACCTTCTTCTTTTTATTATA
AAGGGTATAAGGGTACCTTACCTAGGAGTAATAACTGCAATGTTTTTCTC
TATAATCTATAATGATATTTCACTTTCATCATATTTCAATTATGCAACAG
TCTCTTTTCTAGAaatgaatgaaacaaaaatttatgaaaaataacaagga
ataaaagaaattaaagtTACAAGTAAAATCTAAAccttaaattgaaaata
aatatttattcTAGATTTTGGAGTTTGCACTGATGTACCTAGATGTTTTG
GTAGGTCCTTTTCGtctaaaaaagttgattttgttcTATACTAAATCCCT
ATTCCAATAAGGTAAATGCGTGTGATCACGATTTTGGGTACTGCTAATGC
AGATCTGTATTGCAATATTCTCTTGTTTTTTAGATTCCCCTGATTTTTGT
TTCACCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00029135TCONS_00029135Clytia hemisphaericatranscript
TCONS_00029136TCONS_00029136Clytia hemisphaericatranscript
TCONS_00029137TCONS_00029137Clytia hemisphaericatranscript
TCONS_00029138TCONS_00029138Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00029136-proteinTCONS_00029136-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000726supercontigsc0000726:7576..13682 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	11.07	10.7	7.7	12.89	5.03	6.49	5.3	5.28	6.07	5.54	0.06	0	0.16	0.33	0	0.08	0.75	0.29	0.12	0.14	4.27	9.22	0	0	0.78	0.58