XLOC_032129 (gene) - C. hemisphaerica

Overview
NameXLOC_032129
Unique NameXLOC_032129
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_184:33961..37899-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032129 ID=XLOC_032129|Name=XLOC_032129|organism=Clytia hemisphaerica|type=gene|length=3939bp|location=Sequence derived from alignment at scaffold_184:33961..37899- (Clytia hemisphaerica)
CTTGACAGTCGAGACAGTTGGCACAATGGAGGACTGGACAGTCGAGACAG
TTGAAACAATGGAGGACTGGACAGTCGAGACAGTTGAAACAATGGAGGAC
TGGACAGTCNGGAGCTAGCTGACGATGACTTGACAGTCGAGACAGTCGGC
ACAATGGAGGACTGGACAGTCGAGACAGTTGAAACAATGGAGGACTGGAC
AGTCGAGACAGTTGAAACAATGGAGGACTGGACAGTCGAGACAGTTGATG
CGATGGAGGCTTGGACAGTCGAGACAGTTGGCGCAATGGAGGACTGTACA
GTCGAGACTGTTGACGCAATGGAGGACTGTACGGTCAAGACAGTTGACGC
GATGGAGGATTGGACAGTCGACGCGATAGAGGATTGGACAGTCGACGCAA
TGGAGAAATGGACTGTTGGTGACGAGATGATCGAACTTGCTGACGAGGAA
AGATGATTGACGGTCGATGACAAAGTGGCTGACGAGGAATGGACAGTAGC
AGTTTTCGATCTTGGCATACTTGAAACGATTGAAAATTGCGGTGAGTCTT
TATTTTTTGTGGTGGTCACCATTGTCATCCGATCAAAAACAAAACCATTT
ACCTCTCNTCGATTTTCGTTTTGCCTTTTCAACCTAATATAGATAGAAGG
ATAATACATTAAATCAATAAGAATTATTTTTTAATTATGACTTTAGTACC
TTATTGGAACTAATTTTTGCAGGTTTTAATTTTAGCTTTTTCGGCAAAAA
AAATCTTGAAAAATCCCTAGGAAAATGAAAGAAATTTGTCCAAAAAAGGG
CAAAACCGCAAAAATTAAAACCTGCAAAAATTCCAGAATGTAAAAAACCG
CCAAAATTNGTTTTAATTTTAGCTTTTTCGTCAAAAAAAAACTTGAAAAA
TCCCTAGGAAAATGAAAGAAATTTGTCCAAAAAAGGGCAAAACCGCAAAA
ATTAAAACCTGCAAAAATTCCAGAATGTAAAAAACCGCCAAAATTAGAAC
TCGTGAAATGCAATTTTTCAGATATTTTTTTCGACCGCGAAAATTAGTTC
CAATAAGGTAGGTATACCTGATTTCATTTGATTTTCACTATTCCTGAATT
ATATTTTATATTCCTGAATGTTTGAAAATAAGCTCTAGAAACTTGTGTTG
CTTTTAAAGTCAATAATCGGCTACTTTAATCGTAGAAATTTTAGCGAGTT
TTCCCTGTTTTCACTAAAACATGCCGAATCGACAGATCGCTAAAATTTAT
ACGCGCTAAATTTTTCAAAATGCAATTATTTTAGGGGGAAATTTGTTCGT
TTTTTTGAGGTCGCTCGATTTTTTTAGTCAAAGCACTTGTTGTACATTTT
TGGAAAGCTAAGGGGTAGGGGAATCGAAATAACTTGGGTGCCAATTTTGC
TTCGGACACTTTGGTATGATTTTCGGACAAATACGACGGTCTCAGTCAAA
AATCATAGGGTGAAAAAATAATGAAAATTTCAGCTAGAGAAAACTGAGAC
CTGTTATATATTTTTGGAAAGCTCTCAAAAAATTAAGATTAGTGATATAT
TGCGAGTATAGGTGATTTCTTTACCTAACTCGAGATTTTAATCCTTAAAA
ACAGTGTTTTTCAGTGTTTTTCAGCCAGAAACAGCTTTTTTGTCCAGTTT
TAGCGCTTTTGGAAGCTCGATATCTCGAGTTAGGTACTGAAATCACCTAT
ACTCGCAATATATCAATAATCTTAATTTTTTGAGAGCTTTCCAAAAATAT
ACAACAGGTCTCCGTTTTCTCAAGTTAAAATTTTCACTAATTTTTCACCC
TATGATTTTTGCCCGAGACTGTCGTATTTCTCCGAAAATCACACCAAAGT
GTCCGAAACAAAATTGGCACCTAAGTTATTTTAATTCCCCTACCCCTTAG
CTTTCCAAAAATGTATAACAAGTGCTTTGACTAAAAAAATCGAGCGTTTT
TACAAATTTCCCCCTACTATTAGTTTAATTAAATCCAGTCCAAGTCTCCT
TTTTTAATGATTTTTTGCGAAAATTAATAAAGATATTTATTTTTGTCGGT
CCCTAGAGTTCTGTAAGAAAATGTAAAACACACGCTTATCTCTATATATA
TATATATTATCTCTCTCTTATACTTTCACCAAAATACATACATCTCAAAA
AGTTTTTTGGAAATGGCAATTTGCTAAAATTTATCCACGTGAAATTTTTT
GAAATTGTGATTCGCTAAAATTAGTCTTGCTAAAATTTCTATGATTAAAA
TAATCTATATATTAAAAAACCATACAGAGTTATTGACAAACTTTTTTTAC
AAAACCCCCTGGAAATTTTCAACATCAGCTTACCCCTTAGATATTGAGTT
TTCACCCCCTGGAAAATTCTTTTTTTGTTGATTTTCTGAAACAAGAGGTT
GGAAAAAACCTGTAAAGTTTTATTGACCTCTGGAAATCTTCATAAAGCCC
CTTAGAAATTTTTTGAAAATACAAAAAAAAAACCTTGGAAAAAAGGGTTG
AAAGACCCCTGAAAAGTTCCTCAATACCCCTGTAGGGACTAAAAATGGAA
TAACCCAATACTAGATAAGTACTGGTCAAAATTGAAAAAATGGTGGTTTG
TCAAAATTAATATCCATTGCCTTTACCCAAAATCGCCCCTCTTTTTAATC
AAATTGCCCAAAATCTGATACAAATAAGAAATTTTGCCAAAAAAGTATCT
TTATTTTGTGACAGCCTAGAAAAAATCAACTTAAGAAGTATGTTATCTCC
TTTTAGATCCATCAAATCCCAGAAGTTTACATAAATCTCTAAGGTAAGTT
TATAGATACCTTCTTTTCTTTTCCTGACTTCTTTTGTTCCTTTTTATTTG
CCTTTGTTTTGACAATCTTTGCCTTCTTTGGTGTTTTCGTCTTTGGTGTT
TTGGATTTCTGCAAAAAAGAAAAGAAAAGGGATAAATGTCTTTTCAAAAA
AATTTGTATCGTATGGATGGTAGTACAGAGAGGCAAAAAAGTTCTTATAA
AAAAATGTATTTCTTTTCCCGCCAAATCATCCCTTTCTGATACAGGGCTA
GAGTTCAATCTCTAACCTTTCTCAGGCAAGAAAAAGTGAAGCTTTAAAAA
ATGCGTCGCATTTTTGACGACAGATTGAATCTAACAATTCCTTTGTTTAC
GATTGATATTTTTTTCGAAATTTAGCGGTAGATTTTAGTTTCAATCTGTC
ATTTGTGTAAAAACCAGGCGAGCCGCTCAAGGCCGCCCAACTTTGGTAGG
ATTTGTTGTCTCAAATCCTACCAAGGAGATTGACTTCTAGCCCTCCGGAC
TTATACTTCATTGTTTCTGATACCATTGGTCATTACGAAGATAATATATT
CTATATTTTTTCCAGGTCGAACGCAAATCGAGAGCAAAATACTACCGGAG
ATGAAGCTGAATCCGCATGGCTGAAGAAATAAAAACTACATACCGCTTTC
GCTTTAGTTGTTTCTTCTTCCTCTGGTTCTGTGTCCGTATCTGATGAGAC
CACCTCTTTGTTTTGAGTTTTCTCCCACTCCAACTCGAAATCATTGAGTT
CCTCCTTGGTATCTAAAATGTAAAAAATAGACCTATTTTTAGTGGGAAAA
ATACTTTTTGAGCATGAAATTTTCAAGTCAGGGTCCTATAAGGAAACTAT
TAGCTTTGTCATAGCCCGGGGTCCACTTAATGGTTTTTTTATAGACTGGA
TGGCAGTCCTGCCAAAAGTAGACTCTAGTCTTGCTTAGTCACAAACGTTT
TTAGGCCATTTTGAGCCTCGTTGTTCTTATACTTTAGGCGTACAAACTTT
CGCGAGGACGAAAAATCGCGAAATTCACGACAGTTACCTTCGCAAATTTA
ATGAAAAAATATTTTTCGCGAGCATAAACTTTCGCGAATCAAGACGTAAA
ATTGAGAATTTTCACATGAAAAAATTGCTTAGATAGGGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050705TCONS_00050705Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_184supercontigscaffold_184:33961..37899 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.31	0.3	0.28	0.31	0.82	0.61	2.3	2.24	1.03	1.18	2.23	1.36	0.96	1.92	0.24	0.28	0.09	0.12	0.04	0.04	0	0.22	0.17	0.24	1.54	0.83	0.22	0	0.13	0.3