XLOC_033550 (gene) - C. hemisphaerica

Overview


Name	XLOC_033550
Unique Name	XLOC_033550
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_226:479540..488302+

gene from alignment at scaffold_226:479540..488302+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_033550 ID=XLOC_033550|Name=XLOC_033550|organism=Clytia hemisphaerica|type=gene|length=8763bp|location=Sequence derived from alignment at scaffold_226:479540..488302+ (Clytia hemisphaerica)
CATTCGCACGTTTAACGTGCAAATAAAAGCAATGCTTGCAAGAATAAACa
tatttgtgaaattttttatttttttccatcctcaaATATAAAGAATTGAA
GTTGAAGATGAAACATTCTGTTTGAATCAATCAACCGTAAAATGTTTGGA
ATGTATATCAAAAGCctacacacaacgttgtttcaacgttcatctaacgt
gatatggacgttacgaacgttagatgaacattgCTGTAACGTTGTGTGTT
GGCTGTATAACGTTTGATCTTCTGTTATATAATTGATAAAAGTTTtagat
tttcttcaaaaatcaagacATCGCATTAAATTGTCAGTTTAGATCAAGAT
GGGACGTAGAGGGGCTTCCGCAGCCTACCTCCTGTCTTTACTGACGGTTG
CTTTCTGTGATCCATACGAATTTTCCGACTGCTTCCCACCAGCAAATGGT
GATACAGAAACTACATTTAGTTTTTCGACCACGAAATTATCAGAGAAAGA
CCCGACAGAGTTTACTGCTTATCAGGGCAAAGTTATGCTGATTATCAACG
TTGCATCTTTCTGAGGGTGAGTAGTGAGTTTATACTTTAATCCGAATTTT
GTACTTTCGCGTTGCTAAATTTTCTAGAGCCCCGATGATAAGTGAAACTT
TATGGATTTGATTTTACACGTCAGCgttttgaaaatcatttaatCTCGTG
AAAGTGAGTCTATTAGGttatttctttttaatgatttcttaTCACAAGAT
TCACATACAGTAGAGCCTCTAATAGACggtcctatcgtctacacaaggtc
actaaaaaagggaatagtttaggaggcgTGATAAGTTCtggcggagtaag
cagtggctGAGGTGTTTACAGTACAGTTTGTTCCAAACTCAAACGCCACT
TTTTTTTCTCGTAAACCGGCCTGACGCTCTGACTACGCGCTTATATATTT
TCCCGTGTTCGCTGACCCTCtaaaacggacgatagcatcgtctaagtctc
taaaataaactttttacaacaaaacttttttaactCGTTTGAGTTATGTG
ATCTCTTCTCTATTAGTAATTTCAGTCGGAACCTTTTGACATTACTCTTG
AGGCAGAAATGTCTGTCAGAAAGATATCATTACACATTAGTAAACCGCTT
TTGACAGACATTTTTGAGTAGATTCGATTCGTAAacatttttggtgaaaa
ttaatccactcaaAATTATCCTTCCCACAGGTTACTTTTAATGCATCTAA
AAATATGCTAATTGGTAATTCTTTCTAGAGCAGACTTTAATTAACTAAAA
AAATGTGATGCTTTCAGGCTGGCTACTAACTGATGTCAAAAAAAATGAGG
CTGAGCTTAAAACTACATTTATTAGAAAGACTTAAACTTTAGTCGAGTAG
TTGCCAAGCCCGGGGCAAAAGGTTTGCGAAATGACAGGGTGCCGCCCAAC
TTTCGAAAAATCGGAAATTTAGGGTTTAGAATCAAggaaaaaaaccaaaa
ttttgtgaattttggtACCCTTACCGGGAGCTTTTTCCTAAAATTTAGCC
TTTTATCGGAAAAATATTGGAGTTGTTGGTTTTCTGTATGTAACCCTAAG
CGGGGTGCTGAAATTAGATATGGTGATTTTTACGGCCTTAGAGGGACTTT
GAAGGTCCATAAAGGCACCCTTAAGAGTGGCACAGACCTGTACCCtctat
ttgcctaagtaccccccccccccNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNtacagtgatagtaaaggcgggaaaata
aaATACGCGCGGGGTTTACAGCCGTTATGGGGGTAAACGTAAATTAAAAA
TCGGCtgtagagtttcgaagaaagacTGGCAAACTGTACCCGCTGTAAAC
TCTGCGTTTATGAATTtccttcggctttgggctttttttgGTGATTCGTA
GACTatgtacagtatatggcccccgaaaacggaggttttcattaaaatga
agattctgacttgcagatttatcagaattaaatgatttttgtttattttg
aaaggatGATgcttatacttaaaaatgagcatgtttttgctggtttgaga
cagattcaaactaacatatttgcgtctaaaggaaatattttaacaccaaa
attagataaaaattgcatataactcactctagctccttggatattgaaaa
taagttatgaaaacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNatttcaaaactatggtcaaagttttgtattcatatcttaaa
gatatctcgagaaatcgctaaaatttcaaacctccgttttgggggccatt
agaaaaaatctttaagcgattgaaaaatattgttaaaattaaaaattttg
aaaaataacttccaggaaataaagtagagatgttaaaggttttcatgcag
caaaaatttttgtaaaatctcttttcctctagatttgagagaaatttcaa
atttgatcaccgttttgggggccacatactgtatagCACAAGTCTAGAAA
ATTTCTTgCTTTTCTTTTTAGTTACACCCCTCAGTACCGTTACATGAatg
aattacaaaaaaaatacgGTAATCGTACCGGTCAATGCAATCTCCAACTA
TTCGGTTTCCCATGTAACCAATTCGGATATCAGGTAAGATCACGTGACTT
TTATTGAGGTGTTCCATATTTTGTTAATCATCTTGGACATTGAATATCTA
TCAATTACAAAGAGAATTGTAATAATTGAGTTATTGTAATTTTACTTTAC
CGATTAAGCTTTACATAAAGATTTGTCCGCTTTttcgggacacactgtat
tACCTTGAAAGTCTTCCTTTTATTTGTGTAGATAGTAgggggttgtaggg
gttcgaaataccgttttcccgtcacaATTTTTACtcaatcccggaatccc
gaaaattgaaaaaaataataacactgtcacaccggtttgtagaggttaaa
ataccggcataataacaaaaataaggctagataccgtcaccgtctgattc
taaccctatttttatcaggggggtgttttccaccaggctggcactctttt
gctaatagtccactgaaaactttttttaacactctgaaagtttttggctt
ttaatataatcctattagcagcatgtataccaaattttacaattatacac
cgaccagatcaggttttatgacttttttgtgcaggcatatcataaaatcc
agctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNtaagcggaactaaaatactgaaacgcgcgcgcaaaattatgagat
gttttcccaactttccctcacgagtgaagctatgaatgccatcctcggaa
gctttagccttcctgcggtggcaaaaatttttcgctgaatccgcaaaaac
ggcaaattctgtcatttttatgcaaaatataggagaaaaatatctttaaa
gcttaatattttcagttccaGTTAAGCTTTTANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNtttgtgcaggcatatcataaaatccagctaaaac
cctgtaaaatcccaaaatcttaaatttagcataactttagatctaggcat
ccaactgacttcaaatttcgaCAGGTTCTAGGTGtcaatgataaatttta
caaaatatttttaaaattttcaaaaactgctgacgtcattgttttttgaa
aaaaattactcattttctgcatggattttaaacctcgattttatcagtat
gttaaaaaccggcaaatatgttaaacaTATTCGTTTtagcttttagaaat
tcaaaacagaattgaaaaatctccattcgttcaactttaactgctatttt
attgaatagtactttttcattggtaagCGATAATtatgaaactttgtgat
gacgtcatcatctttatgatgacgtcatcaacccaaatttttttatatga
actccttttatggtagagaacatttgtgccaaatttcaagtccacacctt
ttctagatcaaaagttatgcaaggctggtggaaaacaccccttccccctt
gagaatacaaaatccaaaaaagcctgataatGATAGggttaaaataccgt
tttcccgcgTCTctttttttggtcaaatcccgtaataccgtactaaaata
aaaccaatcccgtcacaccgtaaaagtacaacccccccttAGCAGGGACA
AAAAATCACTCTTCGTGTTATGCATTATAATTTTCCATCCAATAGGAGCC
TGCAGAGAACGATGAGCTGTTGAATTGTATCAAGTATGTTCGACCAGGGT
TTGGCTATGAACCTTTGTTTCCATTGGCCAAGAAAGGCGATGTCAATGGC
ATGTATGAACATCCTATCTATACTTTCCTCAAGGTAACTTCTTTTCTcta
ataacacccctgtctcacagccccggtggaactttttttctcagcgggga
taaaaattcctattgaaatcccaatggggatagaaattcctttgttccaa
ggttaaaaattcagtggcaatggttttgaagtgcaatttttaaacattgg
attttaaatggggatgaaataaaagttaatatccatttgaggctgaaatt
gtaaggtattttcccaccgcgagacgaaatttttgtcaattttcccaGTA
GGGccgggttcccagtgggtctgtgacacaggggtatctAATGTAaaata
tccaatgaaataaagttgaagtacagttgacgctctctaattcgatcttc
aaggggaatcggattttcatcgaatacgggagcgtatcgaatagtaggaa
GTCTCCCTAATCCGATATACACGAGGTAAATATCGAATTATAGAGCTGAG
AAAGAAAATATAAGCGAGACTCGATTGGTTTGAACGCGAATCAGGACAAA
TGTCTAAGTTCTTGCTGAAAACCTAAGTTCTTCGGAAGAAAACTTTCGAT
ATTTGCccgttttgaaaagttttgaggaATCGAATTACGAAATTATAATT
CAAacgcaaaaaaatcgaaaatttgaatttcgaacTCCGTCCTAAAGGCC
TTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCgtagtttat
gagagtttcttaagcaaatttgacggtgactttcaatttgatcgaaaacg
ggagcttatcgaatagtagaacgtcgaattagagagcgtccacTGTATTA
AAATCGTATAAAATacctaaaatctcaatatatttcgacaaAGATTGTAG
CTATGTAAAAATCAAATTGTCTATTTTGTCTATTTTATAATTCTCTATTT
AGACTCGTTGTCCCGCTCCTATGGGTTTGATTGCAAACCGAACAGACATC
ACATGGCAACCAATCAGAAACAATGATATCTCATGGAATTTCCAAAAATG
GCTGATCAAACATGATGGCCAGCCTTTCAAGAGGTATGTtagttcaaaaa
ataaattggcttttagaattatacccttacagtgcagtaaAAAACCGtag
aaattcatacccttacagtgcatttttgtcaaattttcaactcttttaga
gcaaaaaaatcagaattttttgCGGATTGCCGCACCTGTTTTTGCCAAAT
TATCTGATAGCCTTTGGctttaagaaaaaagttttgagtccaagaattat
tttttgaaattttatttgtttaaaaagaTTTGATTACGTTAACTTTGCCA
TTTCAGTGGAATTTGAGAGAATCAGTTTGTGCGTTGAAATCATTATAAAT
GCTCTACTTGTGTTTTTTACTCTAGATATACATCACGTACTACTCCACAA
GCAATTGAAAATGACATAGTCATGCTCTTGGATGATTGTACAGCTGCCAC
TAAACAATCACAACAAAGTCAAGATAATGCAGTTCCACAGGCTGCTCAAC
CTCAATCACCACAGGCTAATGCTGTTCCACAACAACAATCACCACAGGCT
AATGCTGTTCCACAACAACAATCACCACAGGCTAATGCATATCCTCAAAA
ACCACAGGCTAATGATGTTCCACAGCGACCAGCAACCGCAGGTGCACAAC
CACAAGCACAAACTGTAGCCTTTGAACACTCCCCACAACAGCCATCATCC
GATAGCGTCGCCCTCGAAACACAACCTAAACCAAATGCGTTTGTGCAACC
ACCTGCACCTGTTAATCAAACACAACCGCAGCCAGCAGCGAGTGGACGCA
AGAGGAGATCACTACTTCCGCGCCGCCACTAAAAAATTTCACGAAAATAA
TACAATACAAAAAACTATATCTTTCGGTTAGTTTAAAGCTTGGAATCTTG
CCACCGCAGTGTCATCAACTTGTTTTGGGCTAACCTCACATACAAAGATA
TATcgaaaaagaatacaaaatttacattaaaacacatgggataaaaaaat
tataaaatgaagGATGGGGGCATTACAATTGCCTACAACTTCGAATTTGT
TGAACACTTCGCACCAGATGGCACAGTTTTTATGAAGATCTATATCGCAA
ATTGGTTTTGCAACGTTCCAATAGATGTGGATTTGATAGAGTTGATCGTT
TCACTGGATTTGATAAAGAGATCAGTTCTTTTGTAATTTATTCAGTCTTT
TATANaccgctgtataatttaccgccttatttttgcggaacacttaattg
gccggaaatcaaattacaaacaaacaaacgcaaagattcgagattccagt
ccaatatttatgcgtgaagctatgagtgcctcctcgtcgctgcgctcctg
cgggggcaaaaaa

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00053156	TCONS_00053156	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00053156-protein	TCONS_00053156-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_226	supercontig	scaffold_226:479540..488302 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.53	1.31	0.88	0.79	4.24	4.49	84.06	95.27	88.1	61.07	137.37	112.81	75.49	68.17	51.33	122.54	83.42	97.02	2.67	2.03	54.32	56.06	47.86	42.14	78.07	96.97	10.17	4.29	0.49	0.5

You are here

XLOC_033550 (gene) - C. hemisphaerica