XLOC_033557 (gene) - C. hemisphaerica

Overview
NameXLOC_033557
Unique NameXLOC_033557
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_226:147858..154336-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033557 ID=XLOC_033557|Name=XLOC_033557|organism=Clytia hemisphaerica|type=gene|length=6479bp|location=Sequence derived from alignment at scaffold_226:147858..154336- (Clytia hemisphaerica)
CAGAGCGCTGACCTTAAGTTTTATAACTTGCTCTCACTGTTTGGTTTCCG TACTAAAAACAAAGTTGTTATTGTGAACTTTGAACATGCTTAAAATAGAG ATACTTCCACTAACTGCCAGGCTGTCTCAAAGATAGAGCATCATTTTCTT TGGCGCTAAATTCTGGTCCCATAGTGCCAATATTTTTGGGAAAAAATTGT GGAATGTATCTGACATTGGCAAAATAGCAATGAATTTTCTTGGCAATGAA TAGTCATCTTTTCAAAAGCTGTGGCAAATAGAATGAGGTGCTTAAATAAG GTATTGGTGCGGAAAGGGTTAAGGACTTTATGCAAAATTGCAAAGTTTTT TCTGAATTTTTAAACAATGATGCAAAATAGTAATACTCAAAATGTAACTT CCAGATTTTTAGGCAAATTTTTGCCAAATGATTTCGGACTTTATTCTCAA AATTGTTTCATTAGATTTTGTTGACATATCTTTAGGAAGGAAGGATTATT TTTGTTAATCCTCTAAAATTAGCATCGTTTGATCTCCAAAAAATATTTAC CACTAAAACATTCTAAATATAGTATAAAACAAGTTTAACTTCATGTTTTC AAGCTTACACATCTTTAAGCTATGCTCTGTTAACCTTCCTTTTTCGTTTG AACAATTTCTTCAACATCATTCAACATGCTTTGACTACCTTTATCAGGTA GAGGTCCATTAAAGTATCACTCTTGTTTATTTTTAGCTAAGTATAACTTT TGCACTTCCCTCTCACAACTGGAACTCACAATGGCCAAAATTCCAGGTAA ATAATCTTGTGGCTGTTATAAGTTCTTGTACAGTTTGGAATTTTGAAGCT CTGGATAAGTTTAAATAATATGCCTTTTCTAAGATAAATATACAGGCCAT GTTTCGTGCCTTTATAACATCAAACTATCAGGCACTGCCTCTCCTGAAAT TAGTTTAAGCAGAGTTTTTGGTGGGAATACACTAAAAACCCTTGCCGGTG CTTCTGGAATATAGCTTCTAAGTTGAAATTATTAAGCCTATTATTACTTG TCTTTAAATTTGGTGTTGCAAACATCAAGATGGTGTTAATTTTCTTTTTC TATCTGGAGGCCTGTTTTCACTTCAAAATCAACCAAATGTAAGCTGAAGT TTCATATTATCATCAAAAAAATATTTTCTGATCGACTGACCCAACTTCAA AATCAAGGTGACAGCAAACAAACTTCAGTCCAGACTCATGTAAAGCACTC ATAATTGAACATTTTCTGTCATAATCTTTTATTTTATTTTGTTAGGTGGA ACTGTTGTTGAACTCGATGGTGATGAAATGACCAGGTTATCAAGATTTTT TTGATTTATGACATAATACCCAATTTCTCTGTATATTTTGATGCTTAATT GCTTTTCATTGAATAGACATCTATGAAATTGTTTTGTGTTTTCATTCAAT GAAGAATCTTATATGATGGGATGCCAGGGTTGAATTTTTGAAATTGCGAA AAATTCTTCCTTTCACAACATCATGGTACTACAATAATGCTGCTTAAAGT ATACTCTCTGGAATTCTCTGCCATTTGATCTGGTAAATTTTTGAAACAAA TTCATATTGTACTTTTAGAGTCATTTGGGATATGATCAAGAAGCAGTTGA TCCTCCCATTTGTTGATCTGGACATAAAAAGATATGACCTTGGTATGGAA AACCGAGATGCAACTGATGATCAAGGTTAGAAAATATTCTAAAGTTAAAG GTCAGTGTGGAGCTTTCTCATCAACAAATTGCATTTCATTTAAAACAAAA TCCACCCATTTTCAGTCCGTTTTAGCTATACTACCTTGAGTAGGATTCCA AGTTTATTTTTACTTTCAAGATGGAAATTTTTGCCATTAGCTACAATCTG CAAATGCAAAATTATTATCCCAGAAACTATGATCAATCTTTTTCTTCCAC AGTAACACNCAAAATTATTATCCCAGAAACTATGATCAATCTTTTTTTAC ACAGTAACACATGAGGCAGCAGCAGCCATTAAAAAATACAATGTTGGAAT CAAATGCGCAACCATCACTCCTGATGAAAAGAGAGTTGAAGGTACTCTTA TATTGTTCTAAAGAACAAGCTGTGATGAAGTTGATCCTAAAATAACTGAA TTATTATCAGTTTGAGGGGTATTAATCTTTACAACTCTAAGGTTATACGA ATATCAGAACCTGTTCTTTATATAAGCACTTACAGTATATAACGCACTAC CTTTTAATAATCCTAATGTTTTATGGTATTTTTTATGGAGTTTTTTTGTA GCAGTATATGCAGAATGACTATTTTTGCATTGTTTTTAGAGTTCAAATTA AAGAAGATGTGGAAATCACCAAACGGTACAATCCGTAACATTCTTGGTGG TACTGTCTTCAGGGAAGCCATCATCTGCAAAAATATACCAAAGCTTGTGC CCGGATGGACTAAACCAATCATTATTGGCAGACACGCTCATGCTGATCAG GTAAAACTAAAACTCTAAACATGAAAGGTTTTTTTATCTCCTGAAAGTTC CAGTCCCTGTAACTTATTTAATGAGTGTTGAAACTTCTCCGTCTGTAGAC GGAAATCGCTTTATTTGAGATACAAATACTTGATTTCCGTCTTTCTAGTA AGAATGATTTTGGTAAAATAGCTCACTAAACAAAAGATTTGACAATTTCG TAAAATGATTAGACTTTTCTGTGAGAATTTTGAAGGGTCAATAAATTCAA ACAAGAACTTGCAGTAAGATCTGCTCGGATCTAATTACATTGTGATAATC TTATATTTTCATGCAGTACAAAGCTACAGATTTTGTTGTGCCTGGTGCCG GCAAACTTGAAATGAAATTCACACCATCTGATGGTAGTGCACCTATGGAG TATGTTGTTTATGATTTCAATGGTGGTGGTGTTGCTATGGGAATGTACAA TACTGATCAGGTTATTAGTGTTTGCTTTGTTTTCATGCTGCTCATTTCAT TTACGATGCTGCACTTTTGCTGCACAAAATTGATCGTCAATTGTTAATTA AAAAAACTTTATTGATAAATTTGTTACAAAAAATCAACTTATGTTGTAAG AATCAAAATTACTACCCTTTTGTTTCAGGATGATTTACAAATTTCTTCTT TTTTATACTAGTCAATCCGAGATTTCGCATACAGCTCTTTCAATTGTGCA TTGGAGAAGTCCTACCCATTGTACTTGAGTACAAAGAACACCATTTTAAA GAAATACGATGGACGTTTCAAGGACATCTTCCAAGAAATCTACGATAAAG AATACAAAGAGAAGTTTGAGAAAGCTGGTATCTGGTAAGTTTGATTAATC TTTTTCAAGTGCTTTTTTCCTTATTTTGATTTTGATCAAAATACCTGGTG AACCTTAAAAACTGTCTTATTATTATATATAAAGTCTGAAGGAAGATTAA GGTTGTAACGTTATAGGAGTTGGGCTGCTTACACACACTAACTTAGTTCT TCGAAAATTCAAGTTAAATCTATATCAATGCAACAACTACACATGACTCA AGCCCTGAAATTAGCCAAATTTTTTACAATCTTGTAAAGTAAACGTTTTT AGATAATCTAAGTATGGCAAACAATAGCCCTTGACTCAATAAGTATAAAA GTATATTATAATATCAGGGATGGTCAGCAGATTTTTTAGAAAATGAGATA TAATGCTATGTACGACCCGAAAATTGGAGTTGCTTATAAAAAAATGTGTA CCCAACTTTTTTCTGTAAATAGATTTTGACCAGAGTTTTTGTCGCTTATG TTGTTTAAGCTCAGATTTTCCTCATAAAGCAAAATTGATGTATGAGATCA GCCCTTCAGCAGAACATGTTATTGTGTAGAATTATGTAACTGAATGATCT TCCATAATTCTTAGTCTTGATATATTCTCCTTTTCAAAGGTATGAGCATC GTCTGATTGATGACATGGTTGCATACGCTTTGAAAGTTGATGGTGGATTT GTTTGGGCTTGCAAGAACTACGATGGAGATGTCCAATCTGACACTGTTGC TCAAGGTTTGTTTGAATATATCAAATCATTTCATAATATGTTACAGCTTT TATAGACAGAATTTACTTACAAAAAAAATTCAAAATTGAACGATTTTTTT TATCTAAATTGCCCTCAATACCATTTAATTTTGTTTTCAATGGTCTTGAT TGTTTACTAGTATTTTAAGTATTTGAGAATGCATGAATAGAATAGAAACG AATCTCTTTCTATATTATTCTTAGGTTATGGATCCCTTGGTATGATGACA AGTGTTTTGTTATGTCCTGATGGAAAGACCATTGAAGCTGAAGCTGCCCA TGGAACTGTCACCAGACATTACAGACAACACCAACAAGGAAAAGAAACCT CAACTAACCCTGTTGGTAAGAATAAGAGGATCATTTCAGTTCTATCCAGA ATATCTATCTCTGTCTATCTATATATTGAAAATACTTTATTTTAATCAAG TTAAAAAAAATTTCATGCTAGGAGTGCTATAGTTTTTCATCTTTACTATT ATGTTAGACCTATCTTGAAATATGTTCGTTTTGCACTGACTTGATGACAA TTTTTCCTTATCAACTAAGTAGCATATTTGATAGCTTTTATTATTAAAAA CGCCAAGTTTGTTTATTAAAACTTCAAATCATCTCAATCTACTTAAACGA TCAAATGAAAAAGTTCAATTTTTAAGTTCAATTTTTTTTTAACTAACTGA AACTCTCAATTCATTTTAGCTTCAATCTTTGCATGGACCCGTGGTTTGTT GCACCGTGGTAAACTTGATAGTAAGTTTGTCAAAATCTTTTATAAAAGCA CCTGTTATTGATTTCCTGACCAATAACTATTATTGATATGATAATAATAT CCCTTCCAGGGAGAAAGAGTGGCGCCCTCTACCTTCGGTTAGATAGCTTT GAAATGAGGACCCTTCGGGTCGTCTCCGTCTGCAGTCACAGACTTACTTT GATATCCCTTTCTTAGTGGTTAATTATACATAAGATACTTAACATTGTTC GACCCAAATTTCTCTTTGTCAGACCCAAAAGCCTCAAGCGAAAGCAATCC TTATCAGATATTTTTGTCCTGTTATTTGTTATTTTTGTAAGAAAATGATG TTCTCTTCCTTCAGGTAATGATAAGCTGACTCAGTTTGCAAAATCCTTAG AAGAGACATGTGTCGAAACTATTGAAAGTGGTTTTATGACAAAAGATTTG GCTATCTGCATCAAAGGTGGAGCTAACAAGTATGTATTTATTTGACCTTT TCTCTCTTAACTCTTGATCCACATTCAATATCTCAATATATTCTTCGATG GTTTTTTATAGTGACCAAAGCTCAGCATGAGATAGGTTAGGATAGATCAA TGGTGGAATTTAACTTATTAAATCTAAGATTTAGACACCCTTAAACTTAT TTGTAAAACAGCTACTACTTAAGTGAGTGCCATCAAGCTATTGTTTGTAA ACTGCCTTTTTCCCCCGTAATGCTTCTTGCAATCACCCTTTTACTCTTCA TATGTGTAGAGGAAAAATTAAAAATAGTAATAGCCACTTTCTTTTTCACT GTTCAACACATGCCTTTTTTTCAAATTCTAGAATTGTTCGTGCTGATTAC TTGAACACCATTGAATTTATTCAAAAGATTGCTGACAACTTGCAAGTGAA ACTTAAAGCTGCTAACTTATAAAATGGAACAGATTCAGATAATTATGGGC TCCAGCTAATATCGTTACTTTAGAAAATAGATTTTTAACCTGATTTTTAT GCTAGAATGATATAATTTAGTGTTTCAGTTTTTCAAATTTGTTAACTTGT CAGATTACTGAAATTTTGTAATTGATTGAATTAAATGCAAATTTATGTTG ATGTTTTTTTCTCTAATTATTAAGTGGCTGATTTGATTTTAAACTTTTAT GAAAACTTTCTAGGCTGAGAGCCTTTATACTTATAAAAAGAAAGCCATTT TATTAGTCTTTAAAGTAATTATTTTCAATTCTTGTAATAATTAATATTTA TAAAATCAAATTCTTAGTCAACAGTACAAATTTTCTTAGTTTTTTTAGTT TTTTTAGAAATGAATTTTTGGGAAGATAATATTATCGTCCGTTAGATTTA CTGCAGTGCTATTTGTCAAGGCTGTTGCAATTCAAGAGATCTCCTCACAA TCTTTATCATTCATTTATTTTCAATGGAAATGTCTTGGTGTCCACTGAAG ATCCTTTCAAATCAAAAGTGTTTTCCTTACAGAGCCGGTGTTGTTTTGCA ATTCTTGGAAAGATTTCGGTACAAAACTTCACTGAAAAGTCATTCCTTTT CCATTCCTGGAAAATGATTGACCATTTTGTAATTAATTACACATGTATTT TCTCTTTTAAGATAACTTAAAACAAAAGAAATAAGAATAAACAAAAAGTG AATAAGGACACATGACTAAAGAAAGTTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053166TCONS_00053166Clytia hemisphaericatranscript
TCONS_00053165TCONS_00053165Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053165-proteinTCONS_00053165-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_226supercontigscaffold_226:147858..154336 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
IDH1isocitrate dehydrogenase [NADP] cytoplasmic Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
167.2 173.15 51.71 39.06 115.51 91.56 164.77 177.2 325.18 303.65 368.01 382.5 207.14 184.8 237.18 294.3 231.18 258.47 104.67 121.84 236.76 236.72 197.28 213.27 180.07 179.68 229.01 209.86 310.32 283.81