XLOC_037998 (gene) - C. hemisphaerica

Overview
NameXLOC_037998
Unique NameXLOC_037998
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_341:248184..254369-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037998 ID=XLOC_037998|Name=XLOC_037998|organism=Clytia hemisphaerica|type=gene|length=6186bp|location=Sequence derived from alignment at scaffold_341:248184..254369- (Clytia hemisphaerica)
TATAACCTTTCAGGTCTTGCAAAATATTTATCGGTTCAGACCGGCTAGAG
TGTTTTTTAAGTATGTCTTGAGTGGTTCCCACGACATCCATCAGCACTAA
AAATCAAAACAAAAGAGAAATTCCAAGAATTTATTGAGTACTTAGTGACA
GTATTTTAACATTCAGTTCTTATGCAGATCTTCAAAACACTTTTATCGCA
TATAAATAGACCTCGTCTAGGTCATATCAAGTAAAAGGTTACTCCGGCAG
GGCAAAGATGAAAGGTCTTATCATCTTGTTATCAGTAATATCACCAGGTT
TTATGCAGATAGCCAACGACATCAGTCGATTGAAGGCAGAGGTGAAAGTG
TTATCATCCAAACTCTCAGACACTGACCACAACTTATCAATTACTGACCA
AAAACTTTCTCAGCAAATCACACAACTTAGTCAACAGCTCTCACAAAAGA
ACCAACAATTGAACCAAGCAACCCTGAAGATTCATCAGTTGGAATTTCTT
AAGACAAAAATTTTAATTCAAGATGGATATTGTCGGATCAAGACAGCATC
ATGTGGCAATTGTTTCTGTCAGGAAGATTACAATCTAGCCGAGAAGTTCT
ACTGCGATTGCCGAAACAAACCAAAACGACGGGATTGCAAAGAGCATTAT
GCAAATGGCGAAAGAATAAATGGCGTTTATCTCATCAGCAACAATGTTCA
AGGTACAGTGGGACCTCTAATTAGCGGACACCATCGGGGAAAGGGGTTAG
TGTCCGCTAATTAGAAGTGTCCGCTTTTTAGAAACTTTTGATCTCGGAGC
TCCAATTTTGAAATTAGGCTATCCCAGGGTATCGAAAATACAAAATTGGG
GTCTAAAGTACTTATCTGCAGACACTAGGCCATAGAAGAACAGCTCGAGT
GACTGGCAAGAGGTTAAATCGAGGTGGTGGGTACGGACTTGAAGTACCAT
TGATTTATGATTTCTTTGGCCCACCTAAATTCGTTGAATGGATCAAGGAA
AAACTGGAAATTTTTAGAAATAATTTGAATAATAAGACTAATAAGTGTTT
GAAATAAAAATATCTGAAACAATTTTTTTCGATTTTGGACGTTTGTGACC
CGTTTGATGTTCAATGTCCGCTAATTGGAGAGCTAAAATAGGGGTTTTGG
CCATTTCGTGCGAAAAAATTTGTCCGCTGATCAGAGGGTNNNNNNNNNNN
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CGGCTGGACAGTCATTCAACGCCGCGTTGACGGAAGCACCAACTTTCAAC
GTGATTGGAAATCATACAAAAATGGATTTGGTTATCTACAGAGGGAGTTC
TGGCTAGGAAATGAAAATATTTATCTTTTAACTAGACAAGCTTTACTCAC
AGGATCAACTGTACGCTTTGAGTTGATCAGAAGAAGCAGTGGAAGAAAGC
TTTGGGCTGAATATTCAACTTTCGAACTAGGTAACGAAGGAACAAAATAC
CAACTAAGGCTTCGTGGTTATAGAGGTAATGTGCGTGATTTGATGACATA
TCACAATGGGGAACGATTTTCGACATTCGACCAAGACAACGACTCAGATG
GCAATCGGCATTGCGCTCAACTATTTAAAGGAGCCTGGTGGTTTCACAAC
TGTCAACATGTCAGTCTTAATGGAGCCTTTGATGCGTTGATGAACGAGAG
AGCGTTTGATTGTATTTGGTGGGGAGATTATGACGACGATGGACGGATGA
TGTTCTCAGAAATAAAGGTTCGCCGGAACTGACCACAACATTAAATATGA
AGTCATAGGACAATTATTTTATGGAGTTTTCTGCTAGCCGAAAAACACCA
CTAGGAAAGCAATGAGGGAAAGGTGGAAAATCAAACGTACATGATCTGTG
TGGCGGAATGACAATACTTAAGGCGTACAAACTTTTGCGAACAGAAACTT
TCGCGATTTTCGCGAATTTTGGCCCTTTTCGCGAAAGTAAATTTCTTTAA
AAATTCTAGGAAGGGTCATTCGCGAAAGTTTATGCTCGCGAAAAATTCTT
GACAAAATAGAAAATCTGTAAAACTTCAAACTTTGATTAAAATGTAACTT
TGATGGCACTTTTTAGCCTGCTAAAAGACTAATAAGTCAAAGAGCAAGAG
TTTCAAGCCAATCCAAGAAGTATTTGTCCCTCTAAGCCANACTAGGAAAC
GGCCGGGGAAAATGAAATTGTCCGCTAATCAGAGGTGTCCGCCTTTTAGA
GTGTCCGTTAATTAGAGGTTTTACTGTATACCATACCCCAAAGACAAATT
TCATTTTCATCAACATTTTTCAACATATGATTATTATTTTTCAGTTTAGA
TTTCATATCTATGAGCATAAAAAAGACAATTTTTATTTTGCAATCAAAAC
GTAATTTTCAAAATTATTCTCTTTAGGAGCGTCGACTCAAGTGTTTTGTG
ACCACACAACTGGTTCCGGCGGCTGGACAGTCATTCAACGCCGCGTTGAC
GGAAGCACCAACTTTCAACGTGATTGGAAATCATACAAAAATGGATTTGG
TCATCTACAGAGGGAGTTCTGGCTAGGAAATGAAAATATTTATCTTTTAA
CTAGACAAGCTTTACTCACAGGATCAACTGTACGCTTTGAGTTGATCAGG
AGAAGCAGTGGAAGAAAGCTTTGGGCTGAATATTCAACTTTCGAACTAGG
TAACGAAGGAACAAAATACCAACTAAAGCTTCGTGGTTATAGAGGTAATG
TGCGTGATTTGANCGCGAAAGTTTATGCTCGCGAAATATATTTTTCCGTT
AAATTCGCGAAAGTAAATGTCGTGAATTTCGCGATTTTTCGTCCACGCGA
AAGTTTCTGCTCGCGAGAGTTTGTACGCCTAATAAAATCAAATCTAGAAT
CATTTTTTATAAGATTCTTCCCTTTTTAAATTTTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060419TCONS_00060419Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060419-proteinTCONS_00060419-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_341supercontigscaffold_341:248184..254369 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.14	0.19	0.72	0.92	0	0	0	0	0.06	0	0.04	0.02	0.26	0.32	7.26	10.43	2.62	4.94	0	0.2	0.21	0.35	1.06	0.76	0.08	0.07	0.15	0.36	0.08	0