XLOC_040993 (gene) - C. hemisphaerica

Overview
NameXLOC_040993
Unique NameXLOC_040993
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_439:139743..153088-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040993 ID=XLOC_040993|Name=XLOC_040993|organism=Clytia hemisphaerica|type=gene|length=13346bp|location=Sequence derived from alignment at scaffold_439:139743..153088- (Clytia hemisphaerica)
GTGAAGATAGGGCATAAGCATCGAACACAAAATGGCGGCTAAAGTTGCGA TTAAAATATTGAGCTGTCTGAAATTCTGAAATTTGTGCCTGAGATGTGTA TTTTTGCACACCAATTTCACCTTTCCAAACTGCCAAATGTCAAACGTAAG GAGGATCAAACTTTGACTTAAGGTCAGGTAAGTATAATTTATTCAATATC CAATAATCTATTCAATTAAGGAACGCTTTAGTGTGTAGTGAGAGGCAATT TGATTTTTGACGCAGGCCATTTTTCATGGCATCATGCCCTTTAAGCGACG GGTTATCAGACACTGCCCCTCTTGAAATTACTAAAATATTGGTAAAAACA GCCTTTTTAGTGGAAAAACACTGGCAGTCAGGCACAACCTGGCAAATGAA CGGGGTAAGCATTTGCATGGGGTATTCGTCATCCAGTCATATTTCAAACT GAAAAAGGGAAAAAAGGAAGAAAACTGGGAACTTTATTTTTTCATTAAAA GTTTCTTCAATCTTCGAAGACAAAATTGACCCATGGAAAAAAAATTTCAT CTATGCAGTTCTTTGTTTTGAAATGAAGCAAAATATTTCCAACCCGGTTC AATTAAACTGGGTATTCGGCGNCAAAATTGACCCATGGAAAAAAAAATTC ATCTATGCAGTTCTTTGAAATGAAGCAAAATATTTTCAACCCGGTTCAAT TAAACTGGGTATTCGGCGCTATTACGTCACTTTCGTTTTCGACCCAGTTC ATTTGCCAATGGTCGCAAGTGAAAAATACCCCGTTCATTTGCCAGGATGT GCCTGACTGACTGGAAAAAGTGCCCTTTTTGGCCACCAACGGACGCCGCC TTGTCTTTCTAAAATGTTCTAAAATATGGCCTGTTGAGTGTTCTTTTTAT AAAGAATGACCAAAGAGGGTCACGCCACAGAATTAATTACATGATCAAGA TAATGAAAAGTTTGGAATTGAATGGCTAATAGACCTTTTTTTAAAGAGGC AGCCATGTTGAATAATTATGTACTCCAGCATAAAAACAATGGATACAGCG CCATCCCATGCATAATTTACTGTATCATGCATATTTTAAAAATTATGCAT GGCTGTATCATTGTTTTTATGCTGGAGTATATACATAATTATTCAACATG GCTGCCTCTTTAAAAAAAGGTCTATCATCATGCAAACAGCTTTTGGAGGG GCCGTCAACTTTCGATTTTTGAATTTTTTAGCGGCATTTGGCCTAATGGA CCTTTTTTCAAAGAGGCCACCCTGTTGAATAATTATGTAGTCCAGCAGAA AAACAATGATACACCCATGCATAATTATTACAATATGCATGAAACAGTAA TTATGCATTGCTGTATCATTGTTTGTATGGTTGGACTACATAATTATTCA ACAGGGTTGCCTCTTTGAAAAAAGGTCTATGCCGTTAAGAAAATTCAAAA GTAAATTGCATTTCATTTGCTTCTAAATTCCACGATTCTGCACACAAACC AGAGCAAGATCAACTGTCTTCGACTTCGTCCCTTCGCTAAAGAATATATA ACATATTCCATGTATATACCGTCAACTGCTCCAACTTGGGACTATCTTAC GCAACATGGGACGGCCATTCCACCACCATTTCACCGAACCTCCAAAGTCA TTTGATTTGAGTTTAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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TATTGACAGGGTCATTTAATTAATATGACCTTTTTAAACTTCATTATAGT AAGAATTATCAATGTGCTGAATAAGATGCTTTGAATTTTACTAAATTTTT AGTAGAAAATGCTAAAAGAGAGATTTTTGAAGGTGCCAATTGAACTTTTG TCTATTATTGATAAAGTGACATTATTTGACAAAAATATTATTATAGTTAT TGAATATAAATCCCTACGAACCAATCTCAAGAAGTATTATGACACTACTC GATATGATGCAGATAATACAAAAGGATACAGTTAATGACCTATATTTAAT CTCGAAGAGCGTTTAAATAACGTTTTAGCCAATTGGATCTTTATAAAGGA GACAGGGGTGTATAATAATAACTGATTAGAATATTTACATATGTTTTCTT ATAGTCTAGCAAGCTAGACGACTAATTCATACATAGTAGAAATAAAGCAA AAGGTAATAAAGGGAACAATTTTAGTCGTCTAGAAACCTTTGTGCACTAA CTCCAAACAAAAGAAAAGTGTCAATATTTGCAATTATAATTTTTTCCCGC TCAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNGGAAGTTCTGGTCTGTAAAGTAT CCAAACGGATTAGGTAGTCAGTATTAAGTATTAAGTAGTAAGTATTAAGT AGTAGGTATTAGGCGTTTTAGACCTGCACATTATAGAATCGATTGAACCA ATCAAACGCAATTGAAATTTGATTGTTGAATGCAATCAAATCTCAATTGA ATATTACCTCTATTTTCAGGATTAGATTTTGTTTTGATTGAGATTAGATT GCGTTTGATTGTGTTTTCAATTACTCGAATGTGCCATATTATGTGGGGGG GGGGGCGTACGTAAAAAACGATAAAAAGTGTTCGGGAAACGGTGTGTGCA AGAGTCACAGTGACAGTAAAACACCTGATTTTTCTTCCGGGATGAGGTAA TTCTTATAAAAAACAACTGTATTTCGGTAAAAGTCACAGGAGTCAGCAAA AAGTTAAAAGAATCTTACACCATTTCATAAAAAACCTTATTTGAAACGTT AATACAAATGTGCACGGGGCTTTATAAAGCCCAGTTTCTATGAAAAGTGG AAACTTTTTGTTTTGTTTATTTCAATTATCAAGGGGCGTGGAGAAACCGG ACTGTTGACTCAAATGTTTTTTTTCGAATTCTATCAGCTCGTCTTATGTT GTTATGTTTCGCTTTAGTGTGTTGGTTTGTGCAAAACGTAAAGAAATGTC TGTTTCCTATGTCATCAATTGCAGAGCTATTTTTTATACTTTTAAAAACT CTGGAAGAAATTACTGGGACACCCGGTACATTTTTTTCTTTAGAAAGGTA TTTTATCTCTCTAAATTTTTGCAATCGAAACAAAATACAAAAATAGTGAT CTACCTCATACACATCCTATTCCATTTTGCTGAATTTTTGACTTCTAGTC CTTATAATTTTATGGGAAAAACAGCGGGACCGGTATTTTCGATTTAATTT TGGACAGGATACGGTAATTTTCAAAAAATGGCCGGGATGGCGGAAATTCA AAACCTCGTACGACCCCCACTATTATTCAAGAATTTGTCTGTACAGTAAC AGGGGCGGACGACACAGAATTTCTGAGGGAAAAACATTTTCACCAAAATT CAGGTAGGAACATTTGGCGAGTTCCTGTACGCGGCCGCAATAAAAAAATC ATAACCCCTCTCACAAAAAATTTACGTTTGCGTCTTTTTTTATCGTTTTT TGCTTAAACAATATAGCAAACATAGTAAGTATAAGTAGACTGTGCCTTTA ATTGGCTGTAAAAACTTTTTGTGTCGGTTGAAATTTCTCCAACTTTCAAC AATGATAGAAGATCACCTAGAAGATCATTTGCTTTGGTCTCCGGCTTAGG GAAGTAGTAATGTTTTTGATTGTTTTCGATGGAAAATAGTAAGAAACTTA AGTTTACAAGTGTCATTTAGTTTTTGTTGGCTGATAGAATGGCAGGATCC TCCTGGATGGCTTCCCTAACTGAAATTAAAGATTTCCAAGATTTCCAAAA TTTATGAATTTCCAAGGCAATTGAATTAAAATCGGCAAGGAATTTCTGAC GCATTTCTTGCAAGTACATGGATTTTCAGTGGAATTTCCGACCACCAATG GAAAAAATTATTTCCAAGGCTAGAAATAATTTAAAATTGTACGTCGTCTG ACAGGCAGTCTAGACTTATACTCCTATATCAGGATTAGAAACTAGACTAG TCTTACAGCTTTTATTTTTCCATTTGCAACAATACAATGCTGACAAACTG ACACAACACATTGACAAGTAATCCCTGTGAGAAGTTTATATTGAAATTTG CAACAAAACTAAAGTGGTCGCTTCTACTGATTGCTTCGTGGTGCTCCTTT GCACAGACTGTTTATTTGATTTCCACCAATGAGATTCCACATTTCACACA CATCCCTTCTTTTTGGCACCCGTGGCCTATCAGTGCCTTGCCTGACAGGC AGCTGTAAAATCTCACCCTTCAAATCACCTCTTTTATTTGTTTCAAACCG TGATCCCAAGATGTAGACTATATTTCATCTTCAATTTTTTGAAGAAAGCT GGAAATTTGATGCAAGAGTTAGATTGTCAAAAAATTGCCATAAAAAGTCA TTGAATAAAAGAAGAACTTAAAATCTTAAATATTTTCATTTTGAAGAATT GGTGCAAAAAATTGAAACATTTCATTTTTTATGGTTTTGATTGAAATGGG GGATTTGGAAAATTTTCTATGCTTGGTTTTTTACACAAACACCTTTTAAG TAACTATGGGCGAGTACCTCGTTGCTAAGATGTTGACTTGAAATCAAAAA TGAAACCACTGAAAACAAAAGTAAAATCAGCCTGCATTGCAAATCCTGTA ATCTTGATATAGGAGTTTTCGTCTACACTAGCAGGGGTAACGAAAATTTT CTCAAATGGCCCATTATGTTTGATCACTTGAATATGTTCGATTGTTACCA TAGGGTAGTCAGTATAGCCCTAACTCTTCAAATAAAATTTATGGGAAACA CATATTTGGACTTTGTACCCAATGCTGCATGCAAGCACTTAAGCTTTAAA GTCCCGCAAAAGCCTGACAAAAATCAGTTTTTTGAAGTTGAAACACACAT AGAAGATCTTTCAAATTCAGTATGTGGATGGAGCAGTAGAAAATACAACT TTTCTTTTTTTCTTTTTTTGCATAAGGCAATTACTTTTTTTATTTTCTGG TTTACTGAATCGCCAACGTTTTTTTGCAAAAATAAAATAAAAATAAAATT GGATTTTACAGTATTTTATTTATTTATGCTCTTCCGACCTTGTACTGAAC AGCCATAAAAAGGAAACTTTATAGAAAATTACATTTTATAAAAGCAAGAA GGGCAAGTAAAAGGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNCGGTACTAAGTTGTGGGGGCCAGTGCCGGGTGGTG GTCTGATAAGGTAAGTAAAAAACAACTTAGTACATGGTACTAAGTGGTGG TCCTAATTGAAAAAAGCATTTTTGCAACTTTGTATCAAGGGACTAAATGG TGGTCTCGATACCAAATAATGAGGCATCAAGTTAGTATCTGGTACTCAAA ATCCTGAAAAATCACAAAAAAATTCTTATTATAGGCAGTCTATATTAATT TCTTACCATTTTATGGGATGTTTATTACATTTATTGTATATTAAACTTGT CTTTTTGTTTTCCCCTGGGTGTTATCATAGTAGGCCTGATTGGTGTAATT ATCGTGCAAATTTGGAACAAAGCGCCAAATTTGGACCAGACATGACATAT ATGACCAGACATATAAGAAGGGCGGCCCAGAAAATTTTTAAGGGTAGCCC TTATTTCTGGACCCATTTTTTGAAAGCTAGGGTAAAGCCCAAGAGCTCAT TTTTTATGGAAATTTTAAACTCATTTTAGGCCAAAACCAATTATAGAATC TGAAAGCTCTTTTTAAAAATAATATAAAAGACTTTTAAGCGAGTATGGCC AATTTCTGTATTGAACGGGAGCTATTTGATGAAGAAGTGGTGGTTTCCTC CTCATTTTGGTCATAAATCGCTTATAAAATGACACTTCTACATCAAATAA CTCCCATTCAGTACAGAAACCAGCCATACTTGCTTAAAAGTCTTCTATAT TATTTTTCAAGAGCTTTCTGATTCTATAATTGGTTTTGGCCTAAAATGAG TTTGAAATTTCCATAAAAAATGAAGTTAAAAAAGGAAAGTTTTTTAGAAA ATTTAAAGGGGGTGCGTACCAGAAAGTATCATTACTAAGAATTAAAGGGT GGTATACCTATTTTGAGTAGGGAAATCAACTAAGTACAGGGTACTTAACA GTGGTGTGTCATTTTTCAATGGTGATACCAAGATTGTACCGGGTACTAAG GGGTGGTATACCTATTTTAAGGGGTAAATTCAACTTAGTACCATGGTACT AAGTGGTGGTGGTCTCAGATAAATTTCAAAAAACAAAAAAGTACAACTTT TCGGCACTGGTCCAGTACCACAACTTGGTACCCCCCCTGAATAAATGATA AAAAATTAAAATATTGAACAAAGTTTGCAAGAACATTAGATTCAAATCAT TTTGATTATAGTTAAATTTAGCACTTTCTGGGTAGTATGTAGTTTAAAAG TNTGGTCCCCCCCCCCCCCTGCTTTAATGTATGTAAGTTTTCTCAAAACA TATTTTTTCAATTTTTTACAACATTAAAGTGTTTGAAAAGAGCAATTTTA TTTTTATTTTTTTTCCATCCTCCGGTCCAAAAGATCATCTCTAAATGTCC GTAAACCAGAAAATAAAAAAGTAATTGCCTAAGTTCCAGAAATGAAAATG AAGGGAAAATGATAATAATTGAATAAAATTCACTGATGATCTGCGACACT ATGGTAAAGCTAAAGAATCATATTCTAGTTTTCATGTTATTAGATGCTGT TTTAAAGATTTAGTGCCGAACTACACTGCTAACCTTTTCAGTTCCATGGG AACTTTTGGATTACCACTCCCAAGACTTCAGTTTTCTTAGGGGATCCATC CAACTCAGGCTTGCCATAAAACATTGTTGATTGGACGTTATATTTAACAA CCCAGAATAAGCTTACACCATTGTGAGGGAGTGGCAAAAATGTGTAACCC ATACTTTAAAAAAAACATATATTAAGCACCTAAAAGCAGATTATTCCTAA AGAGCAAGCTGCAAACACTTTTTAATCTTCTAGGTATTGTAGAAGTGATC TTGCGATCGCGGTGGGTGTCGTTGTTGATCCGGGTATCAGGCTATTTCCA ATGCTATGACCAATTTTTAAAGCTTTTAGGACACAAACTAAACAATCTAT TGGGCCTGGCTATAAATAGCCTGGCTGGAATCGATATCACAGCACATTCT AGTAACTATTCATTCATGATACTTTATAGCACCCTGAAAATTTCATTTCA AACAATGATCCTATCAAAATTTAGAAGGCAAAAACCCAATTTCCTTAACA GTCAGGGCTTCCTCAGCCTCCAGAGGCTGGGTTTGTCCAGGTCTAAGATA GTAGAGTTGCATAAACCAAGACAAATTTCGTTAATGTCATAGAAGCTATA CGTCTTTGGGGGATGTCATCAGGGCGCAGTCCTTTCTAATTTCAAGCTCT TTTCTGGATTTTTCATACTCCTCTATTGTGAATTCCTTGTCGTTGATTTC AACATCATCATGTCAATTTGTTTGTCCTGATCTTCAACATCACCAGGCTG TTTACCTTGAATGTTCTGGAAAAGATTGAACCACGTACGTACTCGTGCTT TTGGACTGGAACCAGCAACCTGCCCTTTCTTTGACTTTTTCTGTTACCGG ATATTTTGTGTATCATCTTCCAGGCCTCCCCATATATTGATGAGTATCAT GAAGATTTTCTAGCTGAACTTTTTTTTCTTCCTCTGTTTTTGAATTTTCT CTGGTGCTTTTTATAAAATGTTCCTCCTGCTAGAACCAAATTTTTGGTAG TTTGACATATTTCCGAAAAAGACATACACTTTTCACATTGAAACAGATTA ACATTTAATAATCAATACCTGCTGTAATCTGTCATGTTTTTGTTTCCTGA ATTAACAAAAAATCTTTCTATTACTTGGTTTGGAAAACTACACCCCTGTT TCACATCTCAGGTGGAACTTTTATTTCCAGTGGGGCTTGGGTCCCAGCAG GTCTTTGACACAGGGTTCTGAAATATGGACAAAATCAATAATGGGAGTGC TTTGTAAGTATATTATAACAAATTTTAATTAAATAAACTATTAGTTTATA CAGCTTAAAAAAACATAATGGCAACAGCACAAGCCCAACGTGAAGAAGTA GAGGAGATGGAGGATGACGGGGGTCCGATCCTCATCAACAAATTGGAACA ACATGGTATCAGTGCTTCTGATATAAAAAAGTTAAGTGAGGCTGGTTACT ATACCATAGAATCTTTGGCATATACACCAAAGAAGACATTGTTGGCCATC AAGGGGATCAGTGAAGCTAAAGCTGACAAAATATTGAACGAAGTTTTGAA ATTAGTACCCATGGGGTTTACAACAGCCACAGAGTTTCATCAGAAACGTT CTGAGATTATTCAAGTGACAACTGGTTCTAAAGAACTTGATAAACTGTTA CAAGGTGGTATTGAGACTGGCTCCATCACAGAGATATTTGGAGAATTCAG AACTGGTAAAACACAGATATGTCATCAGTTATGTGTTACTTGTCAACTAC CTGTTGACTGTGGAGGTGCTGAGGGAAAAGCTATGTATGTGGACACCGAA GGTACATTTCGTCCTGAAAGACTGTTAGCCGTAGCTGAAAAATATAAACT GAATGGGCAGGAAGTTTTAGACAATGTTGCTTATGCCAGAGCTTATAACT CAGATCACCAGACACAGCTCTTAATCCATGCCTCAGCTATGATGTCAGAA TCGAGATATGCGTTACTGATCGTGGATAGTGCAACTGCTTTATACAGAAC TGACTATGCAGGCCGAGGTGAACTATCAGCCCGGCAAATGCATATGGCTA GATTTTTGCGTACACTCTTGGGTCTAGCTGATCAGTATGGTGTTGCTGTT GTTATCACCAACCAGGTTGTGGCCCAAGTTGATGGCGCATCAATGTTCCA AGCTGATCCTAAGAAACCAATCGGTGGAAACATCATGGCACATGCCTCAA CAACTAGACTTTATTTACGTAAAGGACGTGGTGAAACAAGAATCTGTAAG ATCTATGATTCACCCTGTCTACCTGAAGCAGAGGCCATGTTTGCCATTTA TCCTGATGGGATTGGGGATAGTAAAGACTAATTTTCATTTTTCTTGTACT GTTTTTCGNGGGATTGGGGATAGTAAAGACTAATTTTCATCTTTCTTGTG CAGTTTTTCTTTACTCAGGGGTCTTTCTGAGAATAATTTCAGTAGTATTC ATTTTAATTTTGGCTTTTGCCTTTCGCCCTCTTTTGAAATTTTAAGATTT TCGTTTTTATATCCTCTGGGAGGAAATGCTGTACAATTTTAATGAAAATA GCCTGCATCCTTCAATTGATCTCGTTAAATATAATTTTTGATTACTGTTC TTTCTTTTGTAAATATTGATATTTTATGGTGACATAAACCCACGCAATAT ATTGGTTAATGGGATGTTTTTTTGAAATATATTCTTTTACATACCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065403TCONS_00065403Clytia hemisphaericatranscript
TCONS_00065402TCONS_00065402Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_439supercontigscaffold_439:139743..153088 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RAD51DNA repair protein RAD51 homolog 1 isoform 2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
53.14 50.66 64.42 71.14 17.92 14.02 16.65 18.58 14.99 14.33 14.01 8.31 11.08 9.21 10.59 10.35 19.19 16.22 4.43 5.36 12.5 12.25 43.41 39.3 22.05 20.45 7.53 6.63 22.05 25.68