XLOC_042607 (gene) - C. hemisphaerica

Overview
NameXLOC_042607
Unique NameXLOC_042607
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_482:298661..303640+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042607 ID=XLOC_042607|Name=XLOC_042607|organism=Clytia hemisphaerica|type=gene|length=4980bp|location=Sequence derived from alignment at scaffold_482:298661..303640+ (Clytia hemisphaerica)
AACAGACTTCGGGAAGGAAATGACGTCAATCCAAAATGGTTGATTGGAAG TTATGTATAAATTTAATCGATATTTATATTgattaatattttctttatct ttcCTAAGCAGTCCGCAAAACACTTGTTTCAAGAACGGAAGattgttaca aaaatattttcactaaaacaagAAGATAGGGAAAAAGACCAAgacagaaa aagaagaaacgcaACCACCACaaaagtatttttaatttttactaTACATA CTCAACACAGAATGCTTTTAAATTTGAGTTGTAAATGGCTAAAGGAAGCA GCCACTTTTTCAAACAGAATTCGGAATACCCTTGGTATTTGTGATCAATT CCTTTCAGAAAGCAGGAGATCGGGTTAAATAGATCAGAGATCTGCATAGC cggaaactttttttaaaagatatgaAAATTGAAACCTAGAATTCTGCCGA GTTTAGGCTGAAAGAAAGATAATGTTCTGGATGGAGAAGAAACTAAACTT TAATAAAACCATCATTTGAAAAGAGCTTATCTTGTGAACCGCTCCCAata aaagtttcattttataTGCTGGTACTTGGGCGAGTGAAGGGAACGGTCAG TCCCTCTCAGGTAAGTTATAGCATGTcctaaaattaccataatttttaaa tcgcattagccgacagaaaacgaccaaacaaatgactgaacatgaggggt atgatgaagtttctaacctgctcaggcaaattaaggcctgtccagatttt tcaaacttagcTTAactttttatcaccgtttccacttgtcatagtATGTC ACTTCaacatcgaaagaagcgtatttgagtgtagatcactggaattgctg tgccataattaattttttcacccaaaaaaagatattaggcaaaaaccaaa aaatgctgacgtcagcaaaacttgttttttgaataactccagtttggctt atggtaaaaacatgaaatttggaccaaagttgcacactattaaaaggatc atttaaaaaaaatatttttaaaatttttctgacgtcagcactttattgca aaatttcgtattttgctgatttctcgtgtaacctaattttttttcgctga ttttcgcgaaaaaccacaaaaactgattatgacggcataatcgatgacgt cataaaaactaaaaattgaatttctcaaggatGGTTTATTCAATTGTCTT TTagctttcaccaaagatgtatcataatcagtttttgcagattttcgcgA AAaccagcgaaaaaacaattaggttacacatcaggttacaAACTAAATCA TATTACCCTttatgttcagtcatttgtttggtcattttctgtcgactaat gcgatctagaAATTATggtatttttcagtttttgagacatgccataactt acccgagctGAAAGGGTTGGaagaatcagaaaatcaaacttcagtccacT AAGGGTCAGAAAGAATAaggaaactttcaaatttttgccccccagaaaga tagaaattttgTCTCAATAAGGGCAACAGAATTCACAGTTTTGCTCCTCC TTTTTTAGTTCCGCTATAAGTGTCCGAGGGTAGAAGTAAATATTCTGTTG CTTTTTCTTGTAAgaattattttataagaacatagaGCTCGATCAATTCC CGAAAGCTAAGACCAAATTAAGAAAAATCCTGACTCTTTTAACTcttagg aaaattttaacatttgaTCTCGaatcccccccaaaaaaaattaataggCA AGTCTCAAGCAAAAATCAATGGTTCATATAAACTAAATGTATTTTAGTAG CCTTTTCTTTGGGAAAGTAAAAatatcttttgttttctttaggTAACATG AAGACTTTGTGGGTAGCAGTCCCACTATCATCTATCCTTTTTGGTTTGAT CATAATGAACGATGACGTCACCCACGCTAAAACAATCGACACATGTGGTT GTAAAGAGTTGTTAATGCAATGTTTTGGCGTTGTCGAAAAAGCAGAAAGC CGAGTGAAAAATTGTCTTGAAGCTCACAAAAAATGTCAAGCTTCTTGTCT GGATAAAGGAACTGAAAGACGGCGAGAAATGAAATCCAGCCTTtgggaaa aagaaaaattatttgattCTTTTTGGAATGAGATTtaaagtttattttat tttctataaatCAAAGAACGCAACTacgctaaaaagaaaaatgtttcgTG TTAAACTTATATTGTAGAAATATCAGCATGATATCTTTGACATAAAGGtc ccgtaggaagcattttgatattgggggggggctgaagtttagtgacacac aaaaattttcaaaatttgagctctagattgcttaaaaatacactcaaaac atgcacataaagacaattatgacaaattaaaaaagaaaaactttgtattt ttcaaaataaccatttttgaaaaaattattggggggtcatagcccccccc ttgccccccccccagttgctacggcactgaggtgtcataaaaattgacac atttccaatacaaatttattgtttatgtcaaatatatcgtttaaaccgtt tCAATAATTTTGAGTCAGCACCGAACTCTTTAAAAAACGTACGCCTACCA TAAAGTTTTCTCAAGACGCTTCGTATCCCTGCTTTGTTTCAACCTTCTGT CAGCATTCTCCTATATAGACAGTGAAAAGCCTCTACAAAACTTCTAGCTA GAGAAGAAATTCGAGTAACACGGAGGGTCTCAGCTCCTATGCAGGAAAAG GTTTTCGATGGTATATTAAAAGATTTGTTGGGCATTCTAATGGTTTTAAA AGGAAATGCATCACGTTTAACAAAAAGTTTGGTCTTGAATTGGGCAGAAA AAagctgttgaggaggtccatcattttgtggctggaaatgctgtaatccc ctggaattccaggcaatttcaggtttaaacccctctggaattctgaattt tagtaggatttaaaaggctaccccccccccatgaaattccagttattttt gacagatttttgtatctccctatggaattccggcACTTATTAGACCTTAC CCCTTTGGAACGGAAatagacctcctcaacagggggtatacggttttttt tctggaaaagcccattgtttGTTCTTAATTGCAATGTCAAGATCTAAAAA GGGGAACACTGTTATTTCCctgttctttttttaattcaagttCCGAAATT TCAGCTTTTCAGTGAAATGGACTTCATCAAGTTTTCTACAAGGTTCGTTA CAATAGattgtttgaaaatattgtctTTTTCTTCTACTTCCCTGcaaata ttttccttttaagAAATCAGCATTCTCGGATTTTGAAAGTGTTCCTTTCT CCAAAACAAGAAAAGCATCAATACCAAAGAAATAGCCATGAATGCTGGGC aaagatataaaatatattcaaaggCGAATGCTGCAGTGAACAAAGCAACT GTTGCTCCTAATCTGGAGAACACCAAACGAACACTTTCAGAAAATGCTTG AGTATTGGATGGAACCATTTGGGCCAAAACACTCATTGTAAATAGTTCGT CTACAATAACGACTGTTGACTTCATGAATGGATTGATAATCCATAATGTC ACATTAAGCCATTCAATATCACCGACCAAACGAAAATACAAATAGATTCG ATACATATAGCATGTCGCTATAAAACTTGAAATCCCAAGATTGACCAACT GATTCTTCGATGGTGGTTTGAATACCANActattaaaaggatcatttaaa aaaaatatttttaaaatttttctgacgtcagcactttattgcaaaatttc gtattttgctgatttctcgtgtaacctaattttttttcgctgattttcgc gaaaaaccacaaaaactgattatgacggcataatcgatgacgtcataaaa actaaaaattgaatttctcaaggatGGTTTATTCAATTGTCTTTTagctt tcaccaaagatgtatcataatcagtttttgcagattttcgcgAAAaccag cgaaaaaacaattaggttacacatcaggttacaAACTAAATCATATTACC CTttatgttcagtcatttgtttggtcattttctgtcgactaatgcgatct aaaaattatggtattattcagtttttgagacatgccataacttacccgag ctGAAAGGGTTGgaataatcagaaaatcaaacttcagccCACTAAGGgtc aaaaaaaataaggaaactttcaaatttttgccccccagaaagatagaaat tttgtcccaataagggtaACAAAATTCACAGTTTTGCTCCTCCTTTTTAG TTCCGCTATAAGTGTACGAGGGTAGAAGTAAAtattttgttgctttttct tgtaagaattattttataagaacatagaGCTCGATCAATTCCCGAAAGCT AAGATCAAATTAAGAAAAATCCTTTAACTCTTAGGAAAATTTGAGCATTT GAACTCGAATACCTCCCCCCCTCAAAAAAAACATTAACAGGCAAGTCTCA AGCAAAAATAAACTTTCTTATAAACTAAATGTATTTTAGTAGCCTTTTCT TTGGGAAAGTAAAAatatcttttgttttctttaggTAACATGAAGACTTT GTGGGTAGCAGTCCCACTGTCATCTATCCTTTTTGGTTTGATCATAATGA ACGATGACGTCACCCACGCTAAAACAATCGACACATGTGGTTGTAAAGAG TTGTTAATGCAATGTTTTGGCGTTGTCGAAAAAGCAGAAAGCCGAGTGAA AAATTGTCTTGAAGCTCACAAAAAATGTCAAGCTTCTTGTCTGGATAAAG GAACTGAAAGACGGCGAGAAATGAAATCCAGCCTTtgggaaaaagaaaaa ttatttgattCTTTTTGGAATGAGATTtaaagtttattttattttctata aatCAAAGAACGCAACTacgctaaaaagaaaaatgtttcatGTTAAACTT ATATTGTAGAAATATCAGCATGATATCTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068261TCONS_00068261Clytia hemisphaericatranscript
TCONS_00068262TCONS_00068262Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_482supercontigscaffold_482:298661..303640 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0.23 2.21 1.49 24.5 25.41 11.04 21.6 0.14 0.86 0.22 0.43 1.51 1.2 0.23 0.69 9.03 9.12 13.7 23.41 23.78 27.57 37.85 43.49 1.41 2.06