TCONS_00008115-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008115-protein
Unique NameTCONS_00008115-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1172

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008115-protein ID=TCONS_00008115-protein|Name=TCONS_00008115-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1172bp
FVFVDGEEIFDMVYTSIEQFMQSATPRPTGSNEIKVNRDSNRVKVYVRVR
PFSKDDKLRKITNSPFNVSQDATQLHMFADEKGHSEKTYTFDHVFNTEDD
NQTVSEALTQPLVHSAMNGFNGTLMAYGQTGAGKTFSLMSENGITKTMID
KCFTQIFDDQKHNYKVTVSYLQIYQEKIFDLLSGVNTNNKADLAIRENPR
TGVYVDNLTDYVVRSPSEVLQYIANGKKKLVFAETKMNRTSSRSHAVLQM
VIERTMKDDVTGVDKQDEQTKTPSQDIANPNQDDSELDLNAFGKDVIIRG
KIHICDLAGSERIKRTGASGDRLNEAQHINSSLLELGNVIQALADDSKKH
VPFRNSVLTRLLQESLGGNCKTSLIVCVSPSTRDQQETKCTLNFGSRAMK
VTNTAYVNMEVDFKSLSDQLLKQLQTKEDEIHAVRQSFQESLNNERQKIV
AEYEGENGKLATKLNQQREELNNEMSLMEECILKLQHEADSKAQEVSSLE
EAVVLIDDNSKREKHFIKQIFSSQQEMLSKNENLVKFIQQRLDILSEQNL
SLEDAIEFLTILQNDVSTLEDVGLASIEGPGAHSIEDITSQDFYAPCLKM
FLANQLHQYKTINAKLEELKSHQEDDVDGKIKQCEQEQKQTIEVGVQTVR
DSNAHPANVELNGAEKQEDQEGTSEKLSTTYDNTNISKELESSTQTPSPG
RQSLDLTDGSSDTSLQANDEEREPARRNLKGSPELNTKKSHEIFSGFNST
LNRIEDLVKSDRDRSLERAPSFSRERSMGRSPSFNLGSLSSRSDAGALSS
RSESNSYRSSSSLGYRYDDTYSSKYSSPYTTSFSGSSTARPGSDMYESKY
SSRTYGNSSFSASKYDNNRSFGGSSLTRYNSSENLVSGGFRGSSSDLSLS
YSSRNETKRLEDRIRELEAKVREVTHENQEYSTLVQELSRNFPNDDHLRE
IKRKVTGKIADSIIMGRKENVKVARIEPFSSENRRPSNSINVNYNVTDSN
QLTPKDIDKKNVTYDIQVNVVRNVKQVRDKSPIHNRENLIEFSPTTNESS
TQNDSTSKTSIEYDLKPSSTSTLSAAVFNELDKRQTWTEPMKRKNMSRPL
TWSEDNARTNDNEQNVKRASELGRLDVNPYKSEEVVFSTSKKSSLALPDW
MKLKKKHSKTDQSNHFIKEVIQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004576XLOC_004576Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008115TCONS_00008115Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001752Kinesin_motor_dom
IPR019821Kinesin_motor_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003777microtubule motor activity
GO:0008017microtubule binding
Vocabulary: Biological Process
TermDefinition
GO:0007018microtubule-based movement
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007018 microtubule-based movement
molecular_function GO:0005524 ATP binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003777 microtubule motor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 900..941
NoneNo IPR availableCOILSCoilCoilcoord: 602..622
NoneNo IPR availableCOILSCoilCoilcoord: 417..437
NoneNo IPR availableCOILSCoilCoilcoord: 528..555
NoneNo IPR availableCOILSCoilCoilcoord: 450..502
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1031..1062
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1102..1122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 761..813
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 827..851
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 645..741
NoneNo IPR availableCDDcd00106KISccoord: 42..399
e-value: 5.35447E-103
score: 329.216
IPR001752Kinesin motor domainPRINTSPR00380KINESINHEAVYcoord: 301..319
score: 51.27
coord: 119..140
score: 54.7
coord: 351..372
score: 63.18
IPR001752Kinesin motor domainSMARTSM00129kinesin_4coord: 40..409
e-value: 7.0E-120
score: 414.2
IPR001752Kinesin motor domainPFAMPF00225Kinesincoord: 48..401
e-value: 9.4E-98
score: 327.1
IPR001752Kinesin motor domainGENE3D3.40.850.10coord: 34..414
e-value: 3.7E-113
score: 377.3
IPR001752Kinesin motor domainPROSITEPS50067KINESIN_MOTOR_2coord: 42..401
score: 99.145
IPR019821Kinesin motor domain, conserved sitePROSITEPS00411KINESIN_MOTOR_1coord: 300..311
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 42..255
coord: 291..438

Blast
[Close]
BLAST of TCONS_00008115-protein vs. Swiss-Prot (Human)
Match: KIF3B (Kinesin-like protein KIF3B OS=Homo sapiens GN=KIF3B PE=1 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 1.985e-63
Identity = 147/400 (36.75%), Postives = 209/400 (52.25%), Query Frame = 0 
Query:   38 RDSNRVKVYVRVRPFSKDDKLR---KITNSPFNVSQDATQLHMFADEKGHSE---KTYTFDHVFNTEDDNQTVSEALTQPLVHSAMNGFNGTLMAYGQTGAGKTFSLMS------ENGITKTMIDKCFTQIFDDQKHNYKVTVSYLQIYQEKIFDLLSGVNTNNKADLAIRENPRTGVYVDNLTDYVVRSPSEVLQYIANGKKKLVFAETKMNRTSSRSHAVLQMVIERTMKDDVTGVDKQDEQTKTPSQDIANPNQDDSELDLNAFGKDVIIRGKIHICDLAGSERIKRTGASGDRLNEAQHINSSLLELGNVIQALADDSKKHVPFRNSVLTRLLQESLGGNCKTSLIVCVSPSTRDQQETKCTLNFGSRAMKVTNTAYVNMEVDFKSLSDQLLKQLQ 425
            + S  V+V VR RP +  +K     K+ +    + Q + +     + KG +    KT+TFD V++       + +   +PLV S + GFNGT+ AYGQTG GKT+++        + G+     D  FT I   Q   Y V  SYL+IYQE+I DLLS   T     L ++E P TGVYV +L+ +V +S  E+   +  G +      T MN  SSRSHA+  + IE                               SE+ L+  G++ I  GK+++ DLAGSER  +TGA G+RL EA  IN SL  LGNVI AL D    H+P+R+S LTRLLQ+SLGGN KT ++  V P++ + +ET  TL + +RA  + N   VN     +   D LL++ Q
Sbjct:    5 KSSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVK-----NPKGTAHEMPKTFTFDAVYDWNAKQFELYDETFRPLVDSVLQGFNGTIFAYGQTGTGKTYTMEGIRGDPEKRGVIPNSFDHIFTHISRSQNQQYLVRASYLEIYQEEIRDLLSKDQTKR---LELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIE------------------------------CSEVGLD--GENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVN-----EDPKDALLREFQ 359
The following BLAST results are available for this feature:
BLAST of TCONS_00008115-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KIF3B1.985e-6336.75Kinesin-like protein KIF3B OS=Homo sapiens GN=KIF3... [more]
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