TCONS_00008413-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00008413-protein
Unique NameTCONS_00008413-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length946

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00008413-protein ID=TCONS_00008413-protein|Name=TCONS_00008413-protein|organism=Clytia hemisphaerica|type=polypeptide|length=946bp
MLRTALLNPYKLSKTLIQNTRLASKTSPWKISQTHLNIHSSAISLHPRSR
KGGGAGDESSGGSNSGNNQDDGNGSDGGNKNYPPPPPMFATSKHPETSSF
NALAQINVPENYPTVPVIPLYRNPVFPKFVKLVEISNQWLMDLLRKNQKL
AQPYAGAFLRKDESDSDVIKSLDEIYHTGTFVQITEMHDTGDKIRMIING
HRRISVTGVASIENESESDPAEDLFDKSEFVTTSEKDEGFVEEEICKKHE
NEAEMNGSEAASEEKPILMVNVENVVDEKYQQDQELKAASAEVIKTIRDI
IAMNPLYKESLSQLIEAGKRVVDNPTHLADFGAALTSADAAQLQEVLEEI
EIPKRLMLTLELLKKELAIIMLQQRLGKEVEEKVNKMQRKYLLQEQLKII
KKELGLEKEDKDTVIEKFRSRLEPLTVPEKVNEVIEEEINKLSFLDNHSS
EFSVTRNYLDWLTSLPWGLNSEDLLDLKRAREILDEDHYGLDDIKNRVLE
FIAVGILSKNIRGKILCFTGPPGVGKTSIGKSIARSLNREYFRFSVGGMT
DVAEIKGHRRTYVGAMPGKIIQCLKKTKTENPLILIDEVDKIGRGHQGDP
SSALLELLDPEQNVNFLDHYLDVPVDLSKVLFICTANTQETIPGPLRDRM
EMINVSGYVEDEKMGIAKQYLIPQAQQNAGMDDQMIDLSEDSVLNLIKMY
CRESGVRNLQKHIEKIFRKGALKYVMNEKEKVFVTPDNLKDFVGNPVFNA
EKMYDNTPPGVSVGLAWTSMGGSTLFIETAIVAKSQENKDDGSRGRLETT
GQLGDVMKESCRIAYTFSKSFLLQQDSSNDFFDNNSVHLHVPEGATPKDG
PSAGSTIITAFLSLAMNQPIKQHLAMTGEVSLTGKILPVGGIKEKLIAAR
RSGMKTVLLPEGNRKDYNDLQDFIKNGLDVRFMNDYNDVFREAFQS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_004717XLOC_004717Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00008413TCONS_00008413Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003111Lon_substr-bd
IPR004815Lon_bac/euk-typ
IPR003959ATPase_AAA_core
IPR008269Lon_proteolytic
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR027503Lonm_euk
IPR027417P-loop_NTPase
IPR015947PUA-like_domain
IPR020568Ribosomal_S5_D2-typ_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004176ATP-dependent peptidase activity
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO:0006515misfolded or incompletely synthesized protein catabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006515 misfolded or incompletely synthesized protein catabolic process
biological_process GO:0006508 proteolysis
molecular_function GO:0005524 ATP binding
molecular_function GO:0004176 ATP-dependent peptidase activity
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00830ENDOLAPTASEcoord: 759..775
score: 57.77
coord: 876..895
score: 67.56
coord: 899..917
score: 47.77
coord: 520..539
score: 70.9
coord: 846..865
score: 62.05
NoneNo IPR availableGENE3D1.10.4060.10coord: 280..374
e-value: 8.7E-10
score: 38.3
NoneNo IPR availableGENE3D2.30.130.40coord: 101..217
e-value: 4.3E-13
score: 48.4
NoneNo IPR availableGENE3D1.10.8.60coord: 656..748
e-value: 2.8E-31
score: 106.9
NoneNo IPR availableGENE3D3.40.50.300coord: 477..655
e-value: 1.3E-32
score: 112.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..96
NoneNo IPR availableCDDcd00009AAAcoord: 489..653
e-value: 5.63238E-13
score: 66.4007
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 512..657
e-value: 5.0E-13
score: 59.3
IPR003111Lon, substrate-binding domainSMARTSM00464lon_5coord: 114..365
e-value: 6.9E-41
score: 151.8
IPR003111Lon, substrate-binding domainPFAMPF02190LON_substr_bdgcoord: 114..365
e-value: 4.2E-32
score: 111.6
IPR003111Lon, substrate-binding domainPROSITEPS51787LON_Ncoord: 115..365
score: 31.607
IPR004815Lon protease, bacterial/eukaryotic-typeTIGRFAMTIGR00763TIGR00763coord: 116..944
e-value: 0.0
score: 1074.2
IPR004815Lon protease, bacterial/eukaryotic-typePIRSFPIRSF001174Lon_proteascoord: 244..946
e-value: 1.3E-258
score: 858.2
coord: 101..274
e-value: 1.7E-5
score: 21.2
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 516..653
e-value: 2.5E-22
score: 79.6
IPR008269Peptidase S16, Lon proteolytic domainPFAMPF05362Lon_Ccoord: 734..945
e-value: 4.2E-70
score: 235.4
IPR008269Peptidase S16, Lon proteolytic domainPROSITEPS51786LON_PROTEOLYTICcoord: 756..946
score: 69.33
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 749..945
e-value: 2.4E-61
score: 205.9
IPR027503Lon protease homologue, chloroplastic/mitochondrialHAMAPMF_03120lonm_eukcoord: 5..946
score: 66.709
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 475..753
IPR015947PUA-like domainSUPERFAMILY88697PUA domain-likecoord: 113..210
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 759..943

Blast
[Close]
BLAST of TCONS_00008413-protein vs. Swiss-Prot (Human)
Match: LONM (Lon protease homolog, mitochondrial OS=Homo sapiens GN=LONP1 PE=1 SV=2)

HSP 1 Score: 1108.59 bits (2866), Expect = 0.000e+0
Identity = 546/937 (58.27%), Postives = 687/937 (73.32%), Query Frame = 0 
Query:    9 PYKLSKTLIQNTRLASKTSPWKISQTHLNIHSSAISLHPRSRKGGGAGDESSGGSNSGNNQDDGNGSDGGNKNYPPPPPMFATSKHPETSSFNALAQINVPENYPTVPVIPLYRNPVFPKFVKLVEISNQWLMDLLRKNQKLAQPYAGAFLRKDES-DSDVIKSLDEIYHTGTFVQITEMHDTGDKIRMIINGHRRISVTGVASIENESESDPAEDLFDKSEFVTTSEKDEGFVEEEICKKHENEAEMNGSEAASEEKPILMVNVENVVDEKYQQDQELKAASAEVIKTIRDIIAMNPLYKESLSQLIEAGKRVVDNPTHLADFGAALTSADAAQLQEVLEEIEIPKRLMLTLELLKKELAIIMLQQRLGKEVEEKVNKMQRKYLLQEQLKIIKKELGLEKEDKDTVIEKFRSRLEPLTVPEKVNEVIEEEINKLSFLDNHSSEFSVTRNYLDWLTSLPWGLNSEDLLDLKRAREILDEDHYGLDDIKNRVLEFIAVGILSKNIRGKILCFTGPPGVGKTSIGKSIARSLNREYFRFSVGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKTKTENPLILIDEVDKIGRGHQGDPSSALLELLDPEQNVNFLDHYLDVPVDLSKVLFICTANTQETIPGPLRDRMEMINVSGYVEDEKMGIAKQYLIPQAQQNAGMDDQMIDLSEDSVLNLIKMYCRESGVRNLQKHIEKIFRKGALKYVMNEKEKVFVTPDNLKDFVGNPVFNAEKMYDNTPPGVSVGLAWTSMGGSTLFIETAIVAKSQENKDDGSRGRLETTGQLGDVMKESCRIAYTFSKSFLLQQDSSNDFFDNNSVHLHVPEGATPKDGPSAGSTIITAFLSLAMNQPIKQHLAMTGEVSLTGKILPVGGIKEKLIAARRSGMKTVLLPEGNRKDYNDLQDFIKNGLDVRFMNDYNDVFREAF 944
            P      L++  R    + PW +      I          S +GGGA    SGG ++     +      G        P+             AL  + +P+ +P +P+I + RNPVFP+F+K++E+ N+ L++LLR+  +LAQPY G FL++D+S +SDV++SLDEIYHTGTF QI EM D GDK+RMI+ GHRR+ ++               +  +K +    S++ +   E+E+  +H  E  M  +     E  +LMV VENVV E +Q  +E+KA +AE++KTIRDIIA+NPLY+ES+ Q+++AG+RVVDNP +L+D GAALT A++ +LQ+VLEE  IPKRL   L LLKKE  +  LQQRLG+EVEEK+ +  RKYLLQEQLKIIKKELGLEK+DKD + EKFR RL+ L VP+ V +V++EE++KL  LDNHSSEF+VTRNYLDWLTS+PWG  S + LDL RA+ +L+EDHYG++D+K R+LEFIAV  L  + +GKILCF GPPGVGKTSI +SIAR+LNREYFRFSVGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKTKTENPLILIDEVDKIGRG+QGDPSSALLELLDPEQN NFLDHYLDVPVDLSKVLFICTAN  +TIP PLRDRMEMINVSGYV  EK+ IA++YL+PQA+   G+D+    LS D +  LIK YCRESGVRNLQK +EK+ RK A K V  E E V VTP+NL+DFVG PVF  E+MYD TPPGV +GLAWT+MGGSTLF+ET++     ++      G LE TGQLG+VMKES RIAYTF+++FL+Q   +ND+   + +HLHVPEGATPKDGPSAG TI+TA LSLAM +P++Q+LAMTGEVSLTGKILPVGGIKEK IAA+R+G+  ++LP  N+KD+ DL  FI  GL+V F+  Y ++F  AF
Sbjct:   32 PTAAGAWLLRGQRTCDASPPWALWGRGPAIGGQWRGFWEASSRGGGA---FSGGEDASEGGAEEGAGGAGGSAGAGEGPVI-----------TALTPMTIPDVFPHLPLIAITRNPVFPRFIKIIEVKNKKLVELLRRKVRLAQPYVGVFLKRDDSNESDVVESLDEIYHTGTFAQIHEMQDLGDKLRMIVMGHRRVHIS-----RQLEVEPEEPEAENKHKPRRKSKRGKKEAEDELSARHPAELAMEPTPELPAE--VLMVEVENVVHEDFQVTEEVKALTAEIVKTIRDIIALNPLYRESVLQMMQAGQRVVDNPIYLSDMGAALTGAESHELQDVLEETNIPKRLYKALSLLKKEFELSKLQQRLGREVEEKIKQTHRKYLLQEQLKIIKKELGLEKDDKDAIEEKFRERLKELVVPKHVMDVVDEELSKLGLLDNHSSEFNVTRNYLDWLTSIPWGKYSNENLDLARAQAVLEEDHYGMEDVKKRILEFIAVSQLRGSTQGKILCFYGPPGVGKTSIARSIARALNREYFRFSVGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKTKTENPLILIDEVDKIGRGYQGDPSSALLELLDPEQNANFLDHYLDVPVDLSKVLFICTANVTDTIPEPLRDRMEMINVSGYVAQEKLAIAERYLVPQARALCGLDESKAKLSSDVLTLLIKQYCRESGVRNLQKQVEKVLRKSAYKIVSGEAESVEVTPENLQDFVGKPVFTVERMYDVTPPGVVMGLAWTAMGGSTLFVETSLRRPQDKDAKGDKDGSLEVTGQLGEVMKESARIAYTFARAFLMQHAPANDYLVTSHIHLHVPEGATPKDGPSAGCTIVTALLSLAMGRPVRQNLAMTGEVSLTGKILPVGGIKEKTIAAKRAGVTCIVLPAENKKDFYDLAAFITEGLEVHFVEHYREIFDIAF 947
The following BLAST results are available for this feature:
BLAST of TCONS_00008413-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LONM0.000e+058.27Lon protease homolog, mitochondrial OS=Homo sapien... [more]
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