TCONS_00008635-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00008635-protein
Unique Name	TCONS_00008635-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	300

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00008635-protein ID=TCONS_00008635-protein|Name=TCONS_00008635-protein|organism=Clytia hemisphaerica|type=polypeptide|length=300bp
QKNFEPTDVRNDDTSAVDFFTQYTKVLQQAHGNIEDIDEEAINGNDDVDD
DGGEGKEKQEEEKEQQIPLHFDILIKALERCTYFNSAHHREIQLKSLDVT
QHCVIALRQRENDLLPALHKIWPSVVTKLHSKDMVIVLKSLDIVSCMVTH
SGDFLRKRLTTEFLSRAMQFLEEHNQSFSKNKSRFTQIHKALIKMISFLA
DTAVSLDVGLKDFCNVVQICAKYLNCHLHEAVQKSAVEAIRKLHTYKPEA
TWLLLNSFATQPEMIEPPKLIFPKIKFSEDAMKRNVYSDNVSRILMGKGD

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_004835	XLOC_004835	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00008635	TCONS_00008635	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 32..271 e-value: 1.5E-12 score: 46.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..64
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 94..250

Blast

[Close]

BLAST of TCONS_00008635-protein vs. Swiss-Prot (Human)
Match: TTI1 (TELO2-interacting protein 1 homolog OS=Homo sapiens GN=TTI1 PE=1 SV=3)

HSP 1 Score: 111.694 bits (278), Expect = 2.644e-27
Identity = 82/300 (27.33%), Postives = 132/300 (44.00%), Query Frame = 0

Query:    3 NFEPTDVRNDDTSAVD---FFTQYTKVLQQAHGNIEDID--EEAINGNDDVDDDGGEGKEKQEEEKEQQIPLHFDILIKALERCTYFNSAHHREIQLKSLDVTQHCVIALRQRENDLLPALHKIWPSVVTKLHSKDMVIVLKSLDIVSCMVTHSGDFLRKRLTTEFLSRAMQFLEEHNQSFSKNKSRF--TQIHKALIKMISFLADTAVSLDVGLKDFCNVVQICAKYLNCHLHEAVQKSAVEAIRKLHTYKPEATWLLLNSFATQPEMIEPPKLIFPKIKFSEDAMKRNVYSDNVSRIL 295
            N  P  +    T+A D   F   Y K    A GN+ D D  EE  +    VD++          + E  +PL   I +  +ERC +  S  + +I+LK LDV   CV+ L+  +N LLP  H+ WPS+V +L     + VL++  ++  + +  GDFLR R   + L +    L       ++    +  T   K  + ++  L      LD+G  D   V   C  YL+      +Q++A      L    P++TW LLN     P    PP      ++    + ++N Y+ NV ++L
Sbjct:  793 NQRPAALEKSTTTAEDIEQFLLNYLKEKDVADGNVSDFDNEEEEQSVPPKVDEN------DTRPDVEPPLPLQIQIAMDVMERCIHLLSDKNLQIRLKVLDVLDLCVVVLQSHKNQLLPLAHQAWPSLVHRLTRDAPLAVLRAFKVLRTLGSKCGDFLRSRFCKDVLPKLAGSLVTQAPISARAGPVYSHTLAFKLQLAVLQGLGPLCERLDLGEGDLNKVADACLIYLSVKQPVKLQEAARSVFLHLMKVDPDSTWFLLNELYC-PVQFTPPHPSLHPVQLHGASGQQNPYTTNVLQLL 1085

The following BLAST results are available for this feature:

BLAST of TCONS_00008635-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00008635-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TTI1	2.644e-27	27.33	TELO2-interacting protein 1 homolog OS=Homo sapien...	[more]

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TCONS_00008635-protein (polypeptide) - C. hemisphaerica