TCONS_00012891-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012891-protein
Unique NameTCONS_00012891-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length470

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012891-protein ID=TCONS_00012891-protein|Name=TCONS_00012891-protein|organism=Clytia hemisphaerica|type=polypeptide|length=470bp
VTYLKKTRNKTRFKTQRKMSTSNKSIHEWTVSDVAEWLDENNLSKHKALL
CDEHQIDGSALISLNESDLRKPPVEMTVLGDIKRITSAVDRLRAFNNAAM
YNDFADGFSPKPGGGSGRKKRRKQRIMSFSDDEDNESLFTTDNPDGIDPR
RVNPLEEEIKNALVSEYVRTAISAVYAFSVFLLAAFVLVVVHDRLPDTSN
YPPLPDVVLETIPVIPSAFYWCEICGGILMSFWFLIIIFHKHRLVVFRRS
CAISGTIFLLRCFTMYVTSMSVPGKHLQCSPTKYATFYNRAFRAFEIVSG
GGMAMNGVRTCGDYMFSGHTATLTLLNFFVTEYTPRKWYVLHTFCWLLNA
FGVFFILAAHEHYSIDVLIAFYISSRLFLYYHTLASTVQFRTSDQKRRRI
WFPMFWFFEYGCRLVIPNEFEWPFTYRKLQDVFPSLRNDSSSGAGTPVKS
SGGAGTPAKSGSTPGKKKKR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007232XLOC_007232Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012891TCONS_00012891Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001660SAM
IPR025749Sphingomyelin_synth-like_dom
IPR013761SAM/pointed
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001660Sterile alpha motif domainSMARTSM00454SAM_4coord: 26..95
e-value: 1.6E-8
score: 44.3
IPR001660Sterile alpha motif domainPFAMPF00536SAM_1coord: 28..93
e-value: 1.3E-11
score: 44.6
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 29..95
score: 13.111
IPR025749Sphingomyelin synthase-like domainPFAMPF14360PAP2_Ccoord: 310..383
e-value: 7.1E-27
score: 93.6
NoneNo IPR availableGENE3D1.10.150.50coord: 25..100
e-value: 3.9E-16
score: 58.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 438..470
NoneNo IPR availableCDDcd09515SAM_SGMS1-likecoord: 26..93
e-value: 8.82323E-26
score: 98.861
IPR013761Sterile alpha motif/pointed domainSUPERFAMILY47769SAM/Pointed domaincoord: 23..96

Blast
[Close]
BLAST of TCONS_00012891-protein vs. Swiss-Prot (Human)
Match: SAMD8 (Sphingomyelin synthase-related protein 1 OS=Homo sapiens GN=SAMD8 PE=1 SV=2)

HSP 1 Score: 394.43 bits (1012), Expect = 1.341e-134
Identity = 199/415 (47.95%), Postives = 266/415 (64.10%), Query Frame = 0 
Query:   19 MSTSNK-SIHEWTVSDVAEWLDENNLSKHKALLCDEHQIDGSALISLNESDLRKPPVEMTVLGDIKRITSAVDRLRAFNNAAM----YNDFADGFSPKPGGGSGRKKRRKQRIMSFSDDE---DNESLFTTDNPDGIDPRRVNPLEEEIKNALVSEYVRTAISAVYAFSVFLLAAFVLVVVHDRLPDTSNYPPLPDVVLETIPVIPSAFYWCEICGGILMSFWFLIIIFHKHRLVVFRRSCAISGTIFLLRCFTMYVTSMSVPGKHLQCSPTKYATFYNRAFRAFEIVSGGGMAMNGVRTCGDYMFSGHTATLTLLNFFVTEYTPRKWYVLHTFCWLLNAFGVFFILAAHEHYSIDVLIAFYISSRLFLYYHTLASTVQFRTSDQKRRRIWFPMFWFFEYGCRLVIPNEFEWPFT 425
            M+  N+  I  WT   VA WL +    ++  +LC++H++DG  L++L E DLR PP+E+ VLGDIKR+  +V +L+  +   +    YN      S  P G         Q      + E   D +   T  N D    + +N   +     L  EY +T +S +Y F VF   +F++V+VH+R+PD   YPPLPD+ L+++P IP AF   E+CG IL   W L+++ HKHR ++ RR C++ GT+FLLRCFTM+VTS+SVPG+HLQC+   Y + + +  RAF I SG GM + GV TCGDYMFSGHT  LT+LNFFVTEYTPR W  LHT  W+LN FG+FFILAAHEHYSIDV IAFYI++RLFLYYHTLA+T  ++ S  +R RIWFPMF FFE      +PNE+ WPF+
Sbjct:    1 MAGPNQLCIRRWTTKHVAVWLKDEGFFEYVDILCNKHRLDGITLLTLTEYDLRSPPLEIKVLGDIKRLMLSVRKLQKIHIDVLEEMGYN------SDSPMGSMTPFISALQSTDWLCNGELSHDCDGPITDLNSD--QYQYMNGKNKHSVRRLDPEYWKTILSCIYVFIVFGFTSFIMVIVHERVPDMQTYPPLPDIFLDSVPRIPWAFAMTEVCGMILCYIWLLVLLLHKHRSILLRRLCSLMGTVFLLRCFTMFVTSLSVPGQHLQCTGKIYGSVWEKLHRAFAIWSGFGMTLTGVHTCGDYMFSGHTVVLTMLNFFVTEYTPRSWNFLHTLSWVLNLFGIFFILAAHEHYSIDVFIAFYITTRLFLYYHTLANTRAYQQS--RRARIWFPMFSFFECNVNGTVPNEYCWPFS 405
The following BLAST results are available for this feature:
BLAST of TCONS_00012891-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SAMD81.341e-13447.95Sphingomyelin synthase-related protein 1 OS=Homo s... [more]
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