TCONS_00013052-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013052-protein
Unique NameTCONS_00013052-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length340

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013052-protein ID=TCONS_00013052-protein|Name=TCONS_00013052-protein|organism=Clytia hemisphaerica|type=polypeptide|length=340bp
MNKDLQYELNIGVLNSTTTISIKTIYKRVSSTKESIKFETKIPVFNQVLV
DDNGLIIVHDELIGSSNLHLAVVGDVPPYAESWLEENGVRPIKRFKLRFL
TKADSLSITEYNTIYQVKRYIENQYEIQRVDQKLLFKGKEVNENQSVFSL
MMADPSLPLSDEFGFDLVIKIPVNLRVVYFYKTCDREFQVEVHESDTVAE
VKEKIYVKNKIPIQHIHLSIHGEEGAKLDDGDTRTMKELDLGPEPVLWMR
PVILIHLKVPGRNSKWSFYEELTRLSTLESILINIQRTHRLQRTWLTEIY
DKQGNQCTRNLNLFSSANTDEMSITVYPIMERNKDSCFLM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007304XLOC_007304Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013052TCONS_00013052Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-rel_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 173..252
e-value: 0.043
score: 22.9
coord: 93..170
e-value: 1.4
score: 13.4
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 106..154
e-value: 2.2E-6
score: 27.2
coord: 185..241
e-value: 2.9E-6
score: 26.8
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 93..154
score: 10.571
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 171..247
score: 11.312
NoneNo IPR availableGENE3D3.10.20.90coord: 93..163
e-value: 1.6E-5
score: 24.3
NoneNo IPR availableGENE3D3.10.20.90coord: 170..249
e-value: 2.2E-9
score: 36.5
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 179..248
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 95..149

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00013052-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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