TCONS_00013663-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00013663-protein
Unique Name	TCONS_00013663-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	597

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00013663-protein ID=TCONS_00013663-protein|Name=TCONS_00013663-protein|organism=Clytia hemisphaerica|type=polypeptide|length=597bp
EAPNNTDETKKVDEQWLLINKNEDEDLPVNQFDLTFKEKLNKHDCKVFIK
ASSSIGFIVRDMAHVRDFNIFQCIYAVLLFGEASSNGGLKYKHEEKTISQ
IEQEKRQNPPPKRPTKKNSRRLASPNSDRRRQGGSQADQPRSEDEIEFDE
NTSNIYDAISLQLLDLMYALHTKASKILGNMNWLDYSEKQTAEIKMRWSS
KESLDQLPSTFRGDVDDEMSLLWVKCWCPLLQGIARLACDIRRDIRMNAL
TVLQRSLLAEDLHKLAASEWENCFNQVLFPMLASLLEIPGELDPTGIEET
RMRAATLLCKAFLQHLNTLVSLATFTALWMTILDFMDRYMHADKSDLLFE
AIPESLKNMLLVMSTAGIFEQPCADGEDGVPSSAAEQEKHRKYSALWQVT
WERIDCFLPNLRNDLVATQSPVSIRAISPPEPDIPLGMTMHTTDENQGVQ
EQEDGHVSPVPVQESVTERPPSPEPPTQSMSDFQSITPSTPQRSAGTSPL
MSPERAASPLLADDPLSHLNIKLHAPLPVLSPPGSVQPIHETQPAHPVPI
LLPSFNSLQTLGSPRQSENSLTTSATEGQGASLDTSSSAEKSTIYDI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_007635	XLOC_007635	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00013663	TCONS_00013663	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 556..597
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 446..505

Blast

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BLAST of TCONS_00013663-protein vs. Swiss-Prot (Human)
Match: GBF1 (Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 OS=Homo sapiens GN=GBF1 PE=1 SV=2)

HSP 1 Score: 318.546 bits (815), Expect = 7.730e-95
Identity = 188/419 (44.87%), Postives = 240/419 (57.28%), Query Frame = 0

Query:   12 VDEQWLLINKNEDEDLP-----------VNQFDLTFKEKLNKHDCKVFIKASSSIGFIVRDMAHVRDFNIFQCIYAVLLFGEASSNGGLKYKHEEKTISQIEQEKRQNPPPKRPTKKNSRRLASPNSDRRRQGGSQADQPRSEDEIEFDENTSNIYDAISLQ----LLDLMYALHTKASKILGNMNWLDYSEKQTAEIKMRWSSKESLDQLPSTFRGDVDDEMSLLWVKCWCPLLQGIARLACDIRRDIRMNALTVLQRSLLAEDLHKLAASEWENCFNQVLFPMLASLLEIPGELDPTGIEETRMRAATLLCKAFLQHLNTLVSLATFTALWMTILDFMDRYMHADKSDLLFEAIPESLKNMLLVMSTAGIFEQPCADGEDGVPSSAAEQEKHRKYSALWQVTWERIDCFLPNLRNDL 415
            V+  WL++ K++ ++             +NQ+ LT    L  HD K  +K   S+ FIVRD AH+   N   C+  + +F EAS NGG K   +EK     + + + N   K+  + +  R    +S    +GG   D     DE   DE     Y  +SLQ    LLDLM+ LHT+A+ I        YS          W+ ++   +   T    ++ +   LW  CWCPLLQGIA L CD RR +RM ALT LQR+LL  DL KL A EWE+CFN+VLFP+L  LLE     D  G+EETRMRA+TLL K FLQHL+ L+SL+TF ALW+TILDFMD+YMHA  SDLL EAIPESLKNMLLVM TA IF    AD   G P            SALW++TWERIDCFLP+LR++L
Sbjct: 1342 VNSGWLVVGKDDVDNSKPGPSRPGPSPLINQYSLTVGLDLGPHDTKSLLKCVESLSFIVRDAAHITPDNFELCVKTLRIFVEASLNGGCK--SQEKRGKSHKYDSKGNRFKKKSKEGSMLRRPRTSSQHASRGGQSDD-----DE---DEGVPASYHTVSLQVSQDLLDLMHTLHTRAASI--------YSS---------WAEEQ---RHLETGGQKIEADSRTLWAHCWCPLLQGIACLCCDARRQVRMQALTYLQRALLVHDLQKLDALEWESCFNKVLFPLLTKLLENISPADVGGMEETRMRASTLLSKVFLQHLSPLLSLSTFAALWLTILDFMDKYMHAGSSDLLSEAIPESLKNMLLVMDTAEIFHS--ADARGGGP------------SALWEITWERIDCFLPHLRDEL 1716

The following BLAST results are available for this feature:

BLAST of TCONS_00013663-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00013663-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GBF1	7.730e-95	44.87	Golgi-specific brefeldin A-resistance guanine nucl...	[more]

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TCONS_00013663-protein (polypeptide) - C. hemisphaerica