TCONS_00016142-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016142-protein
Unique NameTCONS_00016142-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length188

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016142-protein ID=TCONS_00016142-protein|Name=TCONS_00016142-protein|organism=Clytia hemisphaerica|type=polypeptide|length=188bp
IFEKMSVMDLYEIVKLERLMKNLLRKSKRIPVTKSDDVDHSDLTDDQIAE
FREAFALFDKDGDGTISSTELETILKSLGQKPTQSELRDMINEVDADGNG
TVDFSEFLTMMATKNKGSSADDEIKEAFSIFDKDGNGKISADELKNVMIN
LGEKLTDEELDEMIREADIDGDGEVNYEEFVKMMSAGT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009018XLOC_009018Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016142TCONS_00016142Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 123..151
e-value: 2.4E-8
score: 43.7
coord: 159..187
e-value: 2.8E-8
score: 43.5
coord: 50..78
e-value: 8.5E-8
score: 41.9
coord: 86..114
e-value: 1.9E-8
score: 44.1
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 51..111
e-value: 2.8E-15
score: 56.4
coord: 122..184
e-value: 1.2E-16
score: 60.9
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 119..154
score: 17.275
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 155..188
score: 14.792
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 82..117
score: 13.704
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 46..81
score: 16.829
IPR002048EF-hand domainCDDcd00051EFhcoord: 123..185
e-value: 9.23094E-22
score: 83.7513
IPR002048EF-hand domainCDDcd00051EFhcoord: 50..112
e-value: 2.43164E-19
score: 77.2029
NoneNo IPR availableGENE3D1.10.238.10coord: 76..99
e-value: 3.4E-18
score: 65.0
NoneNo IPR availableGENE3D1.10.238.10coord: 100..137
e-value: 8.6E-24
score: 82.7
NoneNo IPR availableGENE3D1.10.238.10coord: 38..75
e-value: 3.9E-19
score: 67.8
NoneNo IPR availableGENE3D1.10.238.10coord: 138..185
e-value: 2.1E-24
score: 84.8
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 132..144
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 95..107
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 168..180
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 59..71
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 40..185

Blast
[Close]
BLAST of TCONS_00016142-protein vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.632e-76
Identity = 107/144 (74.31%), Postives = 132/144 (91.67%), Query Frame = 0 
Query:   43 LTDDQIAEFREAFALFDKDGDGTISSTELETILKSLGQKPTQSELRDMINEVDADGNGTVDFSEFLTMMATKNKGSSADDEIKEAFSIFDKDGNGKISADELKNVMINLGEKLTDEELDEMIREADIDGDGEVNYEEFVKMMSA 186
            LT++QIAEF+EAF+LFDKDGDGTI++ EL T+++SLGQ PT++EL+DMINEVDADGNGT+DF EFLTMMA K K + +++EI+EAF +FDKDGNG ISA EL++VM NLGEKLTDEE+DEMIREADIDGDG+VNYEEFV+MM+A
Sbjct:    5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148

HSP 2 Score: 70.8626 bits (172), Expect = 7.415e-16
Identity = 33/65 (50.77%), Postives = 46/65 (70.77%), Query Frame = 0 
Query:   50 EFREAFALFDKDGDGTISSTELETILKSLGQKPTQSELRDMINEVDADGNGTVDFSEFLTMMATK 114
            E REAF +FDKDG+G IS+ EL  ++ +LG+K T  E+ +MI E D DG+G V++ EF+ MM  K
Sbjct:   85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
The following BLAST results are available for this feature:
BLAST of TCONS_00016142-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM31.632e-7674.31Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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