TCONS_00016744-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016744-protein
Unique NameTCONS_00016744-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length299

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016744-protein ID=TCONS_00016744-protein|Name=TCONS_00016744-protein|organism=Clytia hemisphaerica|type=polypeptide|length=299bp
MKIYFEHLFCYISLNLSIFLSISFGDPIPFDTECGHTYFGGHDVHSATSK
LIEGKDSIPHSWPWQAVLYFNGEPECGASILTPYWILTAAHCFNGPWMLE
EDIPMYKYTMRAGLHKLHVKNEYQVEMKVSRILRHPGFSRRHSKYDIALV
RLTTPLMFNEAIQPICLPNTKAESGRKCVSTGWGTTTRGVLDFSETLQQG
EMVVIDTEMCKFHMEMIAPLSVGQYSLCSAGLQNTRMSGCHGDSGSPFVC
YDGKHWELQGVMSWGSRSCGANENEYTVYASVHYLKEWIIETMTLVGYH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009362XLOC_009362Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016744TCONS_00016744Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR033116TRYPSIN_SER
IPR018114TRYPSIN_HIS
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 77..92
score: 51.03
coord: 142..156
score: 34.74
coord: 237..249
score: 49.71
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 50..289
e-value: 6.1E-67
score: 238.4
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 52..289
e-value: 8.6E-56
score: 189.1
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 51..294
score: 30.281
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 52..292
e-value: 8.79702E-68
score: 212.522
NoneNo IPR availableGENE3D2.40.10.10coord: 160..281
e-value: 5.6E-33
score: 113.3
NoneNo IPR availableGENE3D2.40.10.10coord: 51..81
e-value: 2.8E-15
score: 55.7
NoneNo IPR availableGENE3D2.40.10.10coord: 82..159
e-value: 2.7E-26
score: 91.0
IPR033116Serine proteases, trypsin family, serine active sitePROSITEPS00135TRYPSIN_SERcoord: 238..249
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 87..92
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 6..293

Blast
[Close]
BLAST of TCONS_00016744-protein vs. Swiss-Prot (Human)
Match: TMPS3 (Transmembrane protease serine 3 OS=Homo sapiens GN=TMPRSS3 PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 1.219e-39
Identity = 91/267 (34.08%), Postives = 134/267 (50.19%), Query Frame = 0 
Query:   32 TECGHTYFGGHDVHSATSKLIEGKDSIPHSWPWQAVLYFNGEPECGASILTPYWILTAAHCFNGPWMLEEDIPMYKYTMRAGLHKLHVKNEYQVEMKVSRILRHPGFSRRHSKYDIALVRLTTPLMFNEAIQPICLPNTKAE--SGRKCVSTGWGTTTRGVLDFSETLQQGEMVVIDTEMCK---FHMEMIAPLSVGQYSLCSAGLQNTRMSGCHGDSGSPFVCYDGKHWELQGVMSWGSRSCGANENEYTVYASVHYLKEWIIETM 293
            T CGH           +S+++ G  S+   WPWQA L F G   CG S++TP WI+TAAHC    ++ +       +T++ GL  L + N     + V +I+ H  +  +    DIAL++L  PL FNE IQP+CLPN++     G+ C ++GWG T  G  D S  L    + +I  ++C     +  +I+P      S+  AG     +  C GDSG P VC + + W+L G  S+G     A  N+  VY  V    +WI E M
Sbjct:  205 TACGHR-------RGYSSRIVGGNMSLLSQWPWQASLQFQGYHLCGGSVITPLWIITAAHCVYDLYLPKS------WTIQVGLVSL-LDNPAPSHL-VEKIVYHSKYKPKRLGNDIALMKLAGPLTFNEMIQPVCLPNSEENFPDGKVCWTSGWGATEDGAGDASPVLNHAAVPLISNKICNHRDVYGGIISP------SMLCAGYLTGGVDSCQGDSGGPLVCQERRLWKLVGATSFGIGC--AEVNKPGVYTRVTSFLDWIHEQM 448
The following BLAST results are available for this feature:
BLAST of TCONS_00016744-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TMPS31.219e-3934.08Transmembrane protease serine 3 OS=Homo sapiens GN... [more]
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