TCONS_00017142-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017142-protein
Unique NameTCONS_00017142-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length379

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017142-protein ID=TCONS_00017142-protein|Name=TCONS_00017142-protein|organism=Clytia hemisphaerica|type=polypeptide|length=379bp
MKYQTNNDFESSENSSGCTTQRSCQESQCFSSKLKRLQKRMSQYRLIGIL
LSAFSGLAFTMSNFMVQVAHVEISQTSKDNVTISTYELVFIRCFVQLCFV
TPFIYIMKIELYKHLSDIPYCLIMGVAGFTNIILIYCSLEKIPISDTLLV
TFTSPFFCDLFSRLFLKESLHWINCLAGICSFIGVIVVARPSFIFGKYRD
YRITLSDPKFTLRDNETVYLMGIAYAAFGAIFLALYFVLVRKLIKVNGLS
AIMTIFYPSLLGAITTVLLILIFGEPVFIPRNANDFFICSSIGVYSIVAL
VLLTLALSLENATIVNLIRNLDVVYAFLLQYVIFNISPNLWNLTGGTIII
FATSIVVIKQYFTKRMVSDESGIGGDEAE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009593XLOC_009593Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017142TCONS_00017142Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000620EamA_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000620EamA domainPFAMPF00892EamAcoord: 47..189
e-value: 6.9E-12
score: 45.6
coord: 221..357
e-value: 2.0E-9
score: 37.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 91..192

Blast
[Close]
BLAST of TCONS_00017142-protein vs. Swiss-Prot (Human)
Match: S35G1 (Solute carrier family 35 member G1 OS=Homo sapiens GN=SLC35G1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.828e-23
Identity = 83/339 (24.48%), Postives = 162/339 (47.79%), Query Frame = 0 
Query:   24 CQESQCFSSKLKRLQKRMSQYRLIGILLSAFSGLAFTMSNFMVQVAHVEISQTSKDNVTISTYELVFIRCFVQLCFVTPFIYIMKIELYKHLSDIPYCLIMGVAGFTNIILIYCSLEKIPISDTLLVTFTSPFFCDLFSRLFLKESLHWINCLAGICSFIGVIVVARPSFIFGKYRDYRITLSDPKFTLRDNETVYLMGIAYAAFGAIFLALYFVLVRKLIKVNGLSAIMTIFYPSLLGAITTVLLILIFGEPVFIPRNANDFFICSSIGVYSIVALVLLTLALSLENATIVNLIRNLDVVYAFLLQYVIFNISPNLWNLTGGTIIIFATSIVVIKQYF 362
            C  S C  S+ +   K+ +    +G+  +  S   F++ +  V+               +   E+   RC  Q+  V P +   K           + ++ GV G T ++LIY + + + ++D  ++TF+SP F  +F+ + LKE     + L  + +  GVI++ RP F+FG         SD    + ++ + +L G   A   A+F A   V++RK+ K   +   ++I+Y  +LG + +V+++ + GE   +P    D      IG++ +   + +T AL +E A  V +++ +DVV+AF+ Q + FN  P  W + G   ++ +     I++++
Sbjct:   48 CLSSPC-CSRTEPEAKKKAPCPGLGLFYTLLSAFLFSVGSLFVKKVQ-----------DVHAVEISAFRCVFQMLVVIPCLIYRKTGFIGPKGQRIFLILRGVLGSTAMMLIYYAYQTMSLADATVITFSSPVFTSIFAWICLKEKYSPWDALFTVFTITGVILIVRPPFLFG---------SDTS-GMEESYSGHLKGTFAAIGSAVFAASTLVILRKMGK--SVDYFLSIWYYVVLGLVESVIILSVLGE-WSLPYCGLDRLFLIFIGLFGLGGQIFITKALQIEKAGPVAIMKTMDVVFAFIFQIIFFNNVPTWWTVGGALCVVASNVGAAIRKWY 361
The following BLAST results are available for this feature:
BLAST of TCONS_00017142-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S35G15.828e-2324.48Solute carrier family 35 member G1 OS=Homo sapiens... [more]
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