TCONS_00017158-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017158-protein
Unique NameTCONS_00017158-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length404

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017158-protein ID=TCONS_00017158-protein|Name=TCONS_00017158-protein|organism=Clytia hemisphaerica|type=polypeptide|length=404bp
MDGGLASRLKQFDAYPKTLEDFRVKTFGGAVVTGVSSLIMFILFVSELNY
YLTTEVHPELFVDTTRHQKLRINVDIFFPKIGCAYLSVDAMDVSGEQQSD
LDHDIFKKRYDKDGNPVEEAKKEELGDKSDEAMKALNGTATTQDPNRCES
CYGAESSEIRCCNTCEDVRKAYRVKGWALNDIDGIEQCKREHWKDAVKEQ
DGEGCQVYGYVEVSKVAGNFHIAPGKSFQANHVHVQLIKIGKDGKISMNM
HDLQQYGAKQFNISHQIRSLSFGVPIPNVQNPLDGTNITAETGSEMYQYF
VKIVPTVYKKLSGEMVWSNQYSFTKHRRRVRQMTGESGLPGFFVLYELSP
MLVQYTEKRRSFMHFLTGVCAIIGGIFTVAGLIDSMIYHSAKALKKKIEL
GKAT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009601XLOC_009601Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017158TCONS_00017158Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012936Erv_C
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13850ERGIC_Ncoord: 9..98
e-value: 3.0E-30
score: 104.3
NoneNo IPR availableGENE3D1.20.5.510coord: 355..387
e-value: 0.0014
score: 17.7
IPR012936Endoplasmic reticulum vesicle transporter, C-terminalPFAMPF07970COPIIcoated_ERVcoord: 151..384
e-value: 4.0E-86
score: 288.3

Blast
[Close]
BLAST of TCONS_00017158-protein vs. Swiss-Prot (Human)
Match: ERGI3 (Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Homo sapiens GN=ERGIC3 PE=1 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.386e-174
Identity = 242/398 (60.80%), Postives = 304/398 (76.38%), Query Frame = 0 
Query:    8 RLKQFDAYPKTLEDFRVKTFGGAVVTGVSSLIMFILFVSELNYYLTTEVHPELFVDTTRHQKLRINVDIFFPKIGCAYLSVDAMDVSGEQQSDLDHDIFKKRYDKDGNPVE-EAKKEELGDKSDEAMKALNGTATTQDPNRCESCYGAESSEIRCCNTCEDVRKAYRVKGWALNDIDGIEQCKREHWKDAVKEQDGEGCQVYGYVEVSKVAGNFHIAPGKSFQANHVHVQLIKIGKDGKISMNMHDLQQYGAKQFNISHQIRSLSFGVPIPNVQNPLDGTNITAETGSEMYQYFVKIVPTVYKKLSGEMVWSNQYSFTKHRRRVRQMTGESGLPGFFVLYELSPMLVQYTEKRRSFMHFLTGVCAIIGGIFTVAGLIDSMIYHSAKALKKKIELGKAT 404
            +LKQFDAYPKTLEDFRVKT GGA VT VS L+M +LF+SEL YYLTTEVHPEL+VD +R  KL+IN+D+ FP + CAYLS+DAMDV+GEQQ D++H++FK+R DKDG PV  EA++ ELG      ++       + DP+RCESCYGAE+ +I+CCNTCEDVR+AYR +GWA  + D IEQC+RE +   ++EQ  EGCQVYG++EV+KVAGNFH APGKSFQ +HVHV               HDLQ +G    N++H I+ LSFG   P + NPLD TN+TA   S M+QYFVK+VPTVY K+ GE++ +NQ+S T+H +    + G+ GLPG FVLYELSPM+V+ TEK RSF HFLTGVCAIIGG+FTVAGLIDS+IYHSA+A++KKI+LGK T
Sbjct:    6 KLKQFDAYPKTLEDFRVKTCGGATVTIVSGLLMLLLFLSELQYYLTTEVHPELYVDKSRGDKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGIPVSSEAERHELG-----KVEVTVFDPDSLDPDRCESCYGAEAEDIKCCNTCEDVREAYRRRGWAFKNPDTIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHV---------------HDLQSFGLDNINMTHYIQHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQKKIDLGKTT 383
The following BLAST results are available for this feature:
BLAST of TCONS_00017158-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ERGI32.386e-17460.80Endoplasmic reticulum-Golgi intermediate compartme... [more]
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