TCONS_00017192-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017192-protein
Unique NameTCONS_00017192-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length169

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017192-protein ID=TCONS_00017192-protein|Name=TCONS_00017192-protein|organism=Clytia hemisphaerica|type=polypeptide|length=169bp
MADAAAEAAVEKTNFDNISTSSGSENLDSSFSDVSTPVAVRKVEPQTLEE
SCDNMVDKITDYLNGELAATSADYKLLENLNKMATEKYTDMSKTTNNLIT
NMDDINERYKALAPYLQQIDLLEESVLKLEQTAYKLDSYSKQLETKFKTM
ERSSGTIVGNHSNQSPCHP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009613XLOC_009613Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017192TCONS_00017192Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019269BLOC1_su2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.120.570coord: 2..163
e-value: 0.001
score: 18.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
IPR019269Biogenesis of lysosome-related organelles complex-1, subunit 2PFAMPF10046BLOC1_2coord: 54..148
e-value: 1.1E-31
score: 108.8

Blast
[Close]
BLAST of TCONS_00017192-protein vs. Swiss-Prot (Human)
Match: BL1S2 (Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Homo sapiens GN=BLOC1S2 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.084e-33
Identity = 54/103 (52.43%), Postives = 73/103 (70.87%), Query Frame = 0 
Query:   50 ESCDNMVDKITDYLNGELAATSADYKLLENLNKMATEKYTDMSKTTNNLITNMDDINERYKALAPYLQQIDLLEESVLKLEQTAYKLDSYSKQLETKFKTMER 152
            E C +M  K+  YL GEL ATS DYKLLEN+NK+ + KY +M     N+  N+ D+N++Y  L PYL QI+++EE V  LEQ AYKLD+YSK+LE K+K +E+
Sbjct:   39 ELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAINISRNLKDLNQKYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAKYKKLEK 141
The following BLAST results are available for this feature:
BLAST of TCONS_00017192-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BL1S23.084e-3352.43Biogenesis of lysosome-related organelles complex ... [more]
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