TCONS_00017315-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017315-protein
Unique NameTCONS_00017315-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length188

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017315-protein ID=TCONS_00017315-protein|Name=TCONS_00017315-protein|organism=Clytia hemisphaerica|type=polypeptide|length=188bp
MADKAIGAKMQDELVLNAIFNPHNPLQIEESGSEQPGCDPSQDEVTDDIK
KIEIAAVNYAQKGDFEGSLNQFNKVVKLAPSYASGYNNRAQLFRLKGENE
SAMNDLNKAIELSQGKGYAASQAFVQRALISRLNKDNETALEDFQKAAKL
GNAFAKQQITEMNPYAALCNQMLCEVFAKEFNPPVNKE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009690XLOC_009690Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017315TCONS_00017315Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 121..154
e-value: 5.0
score: 16.1
coord: 49..82
e-value: 110.0
score: 5.7
coord: 83..116
e-value: 0.016
score: 24.4
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 135..181
e-value: 0.13
score: 11.7
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 33..134
e-value: 5.3E-14
score: 51.7
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 47..154
NoneNo IPR availablePFAMPF13414TPR_11coord: 59..93
e-value: 1.8E-6
score: 27.4
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 49..154
score: 15.627

Blast
[Close]
BLAST of TCONS_00017315-protein vs. Swiss-Prot (Human)
Match: TTC36 (Tetratricopeptide repeat protein 36 OS=Homo sapiens GN=TTC36 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.718e-40
Identity = 72/186 (38.71%), Postives = 107/186 (57.53%), Query Frame = 0 
Query:   12 DELVLNAIFNPHNPLQIEESGSEQPGCDPSQDEVT--------------DDIKKIEIAAVNYAQKGDFEGSLNQFNKVVKLAPSYASGYNNRAQLFRLKGENESAMNDLNKAIELSQGKGYAASQAFVQRALISRLNKDNETALEDFQKAAKLGNAFAKQQITEMNPYAALCNQMLCEVFAKEFNP 183
            D+ VL AIFNP  P        +  G D  ++                 +  K +E+  V  A+ GD   +L +F + + L P  AS YNNRAQ  RL+G+   A+ DL +A+ELS G+G AA Q+FVQR L++RL   ++ A  DF++AA+LG+ FA++Q+  +NPYAALCN+ML ++  +   P
Sbjct:    6 DQAVLQAIFNPDTPF------GDIVGLDLGEEAEKEEREEDEVFPQAQLEQSKALELQGVMAAEAGDLSTALERFGQAICLLPERASAYNNRAQARRLQGDVAGALEDLERAVELSGGRGRAARQSFVQRGLLARLQGRDDDARRDFERAARLGSPFARRQLVLLNPYAALCNRMLADMMGQLRRP 185
The following BLAST results are available for this feature:
BLAST of TCONS_00017315-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTC361.718e-4038.71Tetratricopeptide repeat protein 36 OS=Homo sapien... [more]
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