TCONS_00020133-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020133-protein
Unique NameTCONS_00020133-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length386

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020133-protein ID=TCONS_00020133-protein|Name=TCONS_00020133-protein|organism=Clytia hemisphaerica|type=polypeptide|length=386bp
MLKMDCLMLILLAIFTQANGMGNEWTPWGPWGPFDATCGPQTRFRLRKCI
IKIPWDECIGDSMSTQVINNIPCPTTAVQTSSPKAKPSEVISVPRPFTEG
TTVDPVFRTEEINTTFRPRTTSTKTTLETSTTFEIVQKTESSTVSTTPST
TSTKTTPQKSTREPTTTNMRNTRSTLLTTLSPITSTESQSTETNYQDKGI
STEKFQTLTVKTTSTTKMQTSTSTVSIDTSKPVKPTKVKTQPTTRPSIES
TEWSTWSSWSENKGKPCGTLFRRRHRVCKKPCEEVQEQATFKPCKKVITQ
KFKIIERIVYQDEISSSKKINVWSFIQCKMKCQFEPSCNQVAINRLKDSS
WDCYFMRTKNGNYGIETWRRKRAFDNPVKVFTKVFR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011309XLOC_011309Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020133TCONS_00020133Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 253..295
e-value: 0.11
score: 17.8
coord: 25..74
e-value: 0.032
score: 22.5
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 22..167
e-value: 2.6E-7
score: 30.3
coord: 249..304
e-value: 4.1E-4
score: 20.1
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 27..50
e-value: 0.0057
score: 16.7
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 22..74
score: 8.987
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 23..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..167

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020133-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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